RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 POLR3GLQ9BT43 218 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 MSL2Q9HCI7 577 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 PPP4R1LQ9P1A2 415 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 ABCF2Q9UG63 623 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 STAP2Q9UGK3 403 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 UBE2QL1A1L167 161 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 CFAP69A5D8W1 941 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 APAF1O14727 1248 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 SLC26A4O43511 780 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 PQBP1O60828 265 aaKnown RBP6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 ARIH2O95376 493 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 ZBED1O96006 694 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 IFIT2P09913 472 aaKnown RBP6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 IL2RBP14784 551 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 RHCEP18577 417 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 IL12RB1P42701 662 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 NEK3P51956 506 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 ZNF280AP59817 542 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 RHDQ02161 417 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 RAB39AQ14964 217 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 ATP2B3Q16720 1220 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 ANO6Q4KMQ2 910 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 HEATR3Q7Z4Q2 680 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 TRMT2AQ8IZ69 625 aaKnown RBP6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 SHCBP1Q8NEM2 672 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 RABGGTAQ92696 567 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 LRRC37BQ96QE4 947 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 LMF1Q96S06 567 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 TMEM60Q9H2L4 133 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 IL23AQ9NPF7 189 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 MOCS1Q9NZB8 636 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 CPA4Q9UI42 421 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 PCDHGB6Q9Y5F9 930 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 ACTL7AQ9Y615 435 aa6.2□□□□□ -1.42
TRAPPC13-205ENST00000504243 ZMYM3Q14202 1370 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 B8ZZF3 427 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 MTSS1O43312 755 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 MGEA5O60502 916 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 CDC14BO60729 498 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 AMY1AP04745 511 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 MYL3P08590 195 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 GZMKP49863 264 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 HK3P52790 923 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 CACNB3P54284 484 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 FAM193AP78312 1265 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 HGFACQ04756 655 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 RIN1Q13671 783 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 GALEQ14376 348 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 LCE4AQ5TA78 99 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 RNF220Q5VTB9 566 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 CIR1Q86X95 450 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 ZGPATQ8N5A5 531 aaKnown RBP6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 LILRA3Q8N6C8 439 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 IL17RAQ96F46 866 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 NEIL1Q96FI4 390 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 SLC35A4Q96G79 324 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 SAMD11Q96NU1 681 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 GPHA2Q96T91 129 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 DPYSL5Q9BPU6 564 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 TCF25Q9BQ70 676 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 LRFN3Q9BTN0 628 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 SSBP3Q9BWW4 388 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 CNNM1Q9NRU3 951 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 PNPOQ9NVS9 261 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 CALCOCO1Q9P1Z2 691 aa6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 FEZ2Q9UHY8 353 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC13-205ENST00000504243 PMM2O15305 246 aa6.18□□□□□ -1.42
TRAPPC13-205ENST00000504243 TEX33O43247 280 aa6.18□□□□□ -1.42
TRAPPC13-205ENST00000504243 MALP21145 153 aa6.18□□□□□ -1.42
TRAPPC13-205ENST00000504243 FPR1P21462 350 aa6.18□□□□□ -1.42
TRAPPC13-205ENST00000504243 PTH1RQ03431 593 aa6.18□□□□□ -1.42
TRAPPC13-205ENST00000504243 FGL2Q14314 439 aa6.18□□□□□ -1.42
TRAPPC13-205ENST00000504243 CNN3Q15417 329 aaKnown RBP6.18□□□□□ -1.42
TRAPPC13-205ENST00000504243 LIMS2Q7Z4I7 341 aa6.18□□□□□ -1.42
TRAPPC13-205ENST00000504243 TMEM176AQ96HP8 235 aa6.18□□□□□ -1.42
TRAPPC13-205ENST00000504243 MRGPRX4Q96LA9 322 aa6.18□□□□□ -1.42
TRAPPC13-205ENST00000504243 APOL5Q9BWW9 433 aa6.18□□□□□ -1.42
TRAPPC13-205ENST00000504243 MEGF9Q9H1U4 602 aa6.18□□□□□ -1.42
TRAPPC13-205ENST00000504243 SLAMF7Q9NQ25 335 aa6.18□□□□□ -1.42
TRAPPC13-205ENST00000504243 HDAC5Q9UQL6 1122 aa6.18□□□□□ -1.42
TRAPPC13-205ENST00000504243 PCDHA1Q9Y5I3 950 aa6.18□□□□□ -1.42
TRAPPC13-205ENST00000504243 A0A1W2PPL8 197 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 PMS2P1A4D2B8 440 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 GOLIM4O00461 696 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 KIAA0391O15091 583 aaKnown RBP6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 PHKG2P15735 406 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 CR2P20023 1033 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 PEX2P28328 305 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 PCSK1P29120 753 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 ALDH1A3P47895 512 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 RAP2BP61225 183 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 RAB1AP62820 205 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 GPSM2P81274 684 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 TLE1Q04724 770 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 SNAPC2Q13487 334 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 MTM1Q13496 603 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 SAFB2Q14151 953 aaKnown RBP eCLIP6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 PLS1Q14651 629 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 SPATS1Q496A3 300 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 FLYWCH1Q4VC44 716 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms