RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 TADA2AO75478 443 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 DDAH1O94760 285 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 CAVIN2O95810 425 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 CAPNS1P04632 268 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 TARBP2Q15633 366 aaKnown RBP14.04□□□□□ -0.16
LSM6-204ENST00000504181 UAP1L1Q3KQV9 507 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 PLK5Q496M5 336 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 RALYLQ86SE5 291 aaKnown RBP14.04□□□□□ -0.16
LSM6-204ENST00000504181 LNX1Q8TBB1 728 aaPredicted RBP14.04□□□□□ -0.16
LSM6-204ENST00000504181 CSGALNACT1Q8TDX6 532 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 PIK3R5Q8WYR1 880 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 TCEAL4Q96EI5 215 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 ZC3H10Q96K80 434 aaKnown RBP14.04□□□□□ -0.16
LSM6-204ENST00000504181 TTPALQ9BTX7 342 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 APOL6Q9BWW8 343 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 RIC8AQ9NPQ8 531 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 CACNA2D2Q9NY47 1150 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 HES2Q9Y543 173 aa14.04□□□□□ -0.16
LSM6-204ENST00000504181 SF3B1O75533 1304 aaKnown RBP eCLIP14.04□□□□□ -0.168e-6■■■■■ 107
LSM6-204ENST00000504181 PTPRDP23468 1912 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 WDR64B1ANS9 1081 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 ZNF263O14978 683 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 PRB1P04280 392 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 HOXA11P31270 313 aaPredicted RBP14.03□□□□□ -0.16
LSM6-204ENST00000504181 GNAQP50148 359 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 KPNA1P52294 538 aaPredicted RBP14.03□□□□□ -0.16
LSM6-204ENST00000504181 NAPAP54920 295 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 ANTXR2P58335 489 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 UVSSAQ2YD98 709 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 DGKKQ5KSL6 1271 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 FAM171A1Q5VUB5 890 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 WWC2Q6AWC2 1192 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 TYW1BQ6NUM6 668 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 TXNDC11Q6PKC3 985 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 IGDCC4Q8TDY8 1250 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 HNRNPLLQ8WVV9 542 aaKnown RBP14.03□□□□□ -0.16
LSM6-204ENST00000504181 LRIG1Q96JA1 1093 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 ASB16Q96NS5 453 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 EIF2AQ9BY44 585 aaKnown RBP14.03□□□□□ -0.16
LSM6-204ENST00000504181 MINDY3Q9H8M7 445 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 IFT122Q9HBG6 1241 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 PCDHB15Q9Y5E8 787 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 NCANO14594 1321 aa14.03□□□□□ -0.16
LSM6-204ENST00000504181 MYO18BQ8IUG5 2567 aa14.02□□□□□ -0.16
LSM6-204ENST00000504181 IGKV6-21A0A0C4DH24 114 aa14.02□□□□□ -0.17
LSM6-204ENST00000504181 VIPR2P41587 438 aa14.02□□□□□ -0.17
LSM6-204ENST00000504181 ADCY7P51828 1080 aa14.02□□□□□ -0.17
LSM6-204ENST00000504181 C19orf57Q0VDD7 668 aa14.02□□□□□ -0.17
LSM6-204ENST00000504181 PRSS36Q5K4E3 855 aa14.02□□□□□ -0.17
LSM6-204ENST00000504181 PKN3Q6P5Z2 889 aa14.02□□□□□ -0.17
LSM6-204ENST00000504181 RAB11FIP4Q86YS3 637 aa14.02□□□□□ -0.17
LSM6-204ENST00000504181 CNNM3Q8NE01 707 aa14.02□□□□□ -0.17
LSM6-204ENST00000504181 DEPDC1BQ8WUY9 529 aa14.02□□□□□ -0.17
LSM6-204ENST00000504181 PAAF1Q9BRP4 392 aa14.02□□□□□ -0.17
LSM6-204ENST00000504181 DUSP15Q9H1R2 295 aaPredicted RBP14.02□□□□□ -0.17
LSM6-204ENST00000504181 DISC1Q9NRI5 854 aa14.02□□□□□ -0.17
LSM6-204ENST00000504181 TAF6LQ9Y6J9 622 aa14.02□□□□□ -0.17
LSM6-204ENST00000504181 APC2O95996 2303 aa14.02□□□□□ -0.17
LSM6-204ENST00000504181 CFAP46Q8IYW2 2715 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 ASXL3Q9C0F0 2248 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 SPAARA0A1B0GVQ0 90 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 BCLAF3A2AJT9 711 aaKnown RBP14.01□□□□□ -0.17
LSM6-204ENST00000504181 WDR27A2RRH5 827 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 ARNTLO00327 626 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 CDX4O14627 284 aaPredicted RBP14.01□□□□□ -0.17
LSM6-204ENST00000504181 CHMP2AO43633 222 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 AKAP3O75969 853 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 CYP21A2P08686 494 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 PTPN2P17706 415 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 OR1D2P34982 312 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 SETQ01105 290 aaPredicted RBP14.01□□□□□ -0.17
LSM6-204ENST00000504181 AP3B2Q13367 1082 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 HSP90AA2PQ14568 343 aaPredicted RBP14.01□□□□□ -0.17
LSM6-204ENST00000504181 PON2Q15165 354 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 NCOA7Q8NI08 942 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 TTC8Q8TAM2 541 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 FAM200AQ8TCP9 573 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 MSANTD3Q96H12 275 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 CEP89Q96ST8 783 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 CORO1BQ9BR76 489 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 AVENQ9NQS1 362 aaPredicted RBP14.01□□□□□ -0.17
LSM6-204ENST00000504181 UNC79Q9P2D8 2635 aa14.01□□□□□ -0.17
LSM6-204ENST00000504181 CCDC163A0A0D9SF12 145 aa14□□□□□ -0.17
LSM6-204ENST00000504181 SPECC1L-ADORA2AF8WAN1 911 aa14□□□□□ -0.17
LSM6-204ENST00000504181 CALM1P0DP23 149 aa14□□□□□ -0.17
LSM6-204ENST00000504181 CALM2P0DP24 149 aa14□□□□□ -0.17
LSM6-204ENST00000504181 CALM3P0DP25 149 aa14□□□□□ -0.17
LSM6-204ENST00000504181 CCR2P41597 374 aa14□□□□□ -0.17
LSM6-204ENST00000504181 CLK2P49760 499 aaKnown RBP14□□□□□ -0.17
LSM6-204ENST00000504181 FXR2P51116 673 aaKnown RBP eCLIP14□□□□□ -0.17
LSM6-204ENST00000504181 SCAPQ12770 1279 aa14□□□□□ -0.17
LSM6-204ENST00000504181 RAB33AQ14088 237 aa14□□□□□ -0.17
LSM6-204ENST00000504181 ELF2Q15723 593 aa14□□□□□ -0.17
LSM6-204ENST00000504181 JAKMIP3Q5VZ66 844 aa14□□□□□ -0.17
LSM6-204ENST00000504181 C1orf228Q6PIY5 440 aa14□□□□□ -0.17
LSM6-204ENST00000504181 LURAP1LQ8IV03 231 aa14□□□□□ -0.17
LSM6-204ENST00000504181 CHCHD4Q8N4Q1 142 aa14□□□□□ -0.17
LSM6-204ENST00000504181 SMARCD2Q92925 531 aa14□□□□□ -0.17
LSM6-204ENST00000504181 ZSWIM3Q96MP5 696 aa14□□□□□ -0.17
LSM6-204ENST00000504181 IL25Q9H293 177 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms