RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 ACAD11Q709F0 780 aa5.04□□□□□ -1.6
NDFIP1-202ENST00000503388 SH3RF1Q7Z6J0 888 aa5.04□□□□□ -1.6
NDFIP1-202ENST00000503388 C4orf19Q8IY42 314 aa5.04□□□□□ -1.6
NDFIP1-202ENST00000503388 DNERQ8NFT8 737 aa5.04□□□□□ -1.6
NDFIP1-202ENST00000503388 USP13Q92995 863 aaPredicted RBP5.04□□□□□ -1.6
NDFIP1-202ENST00000503388 MKL1Q969V6 931 aa5.04□□□□□ -1.6
NDFIP1-202ENST00000503388 CCDC127Q96BQ5 260 aa5.04□□□□□ -1.6
NDFIP1-202ENST00000503388 CCDC97Q96F63 343 aaPredicted RBP5.04□□□□□ -1.6
NDFIP1-202ENST00000503388 LRGUKQ96M69 825 aa5.04□□□□□ -1.6
NDFIP1-202ENST00000503388 MED10Q9BTT4 135 aa5.04□□□□□ -1.6
NDFIP1-202ENST00000503388 IDI2Q9BXS1 227 aa5.04□□□□□ -1.6
NDFIP1-202ENST00000503388 TRIM31Q9BZY9 425 aa5.04□□□□□ -1.6
NDFIP1-202ENST00000503388 DPH5Q9H2P9 285 aa5.04□□□□□ -1.6
NDFIP1-202ENST00000503388 BFARQ9NZS9 450 aa5.04□□□□□ -1.6
NDFIP1-202ENST00000503388 PLAAQ9Y263 795 aa5.04□□□□□ -1.6
NDFIP1-202ENST00000503388 ATXN2Q99700 1313 aaKnown RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 SMIM23A6NLE4 172 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 TCP10L2B9ZVM9 353 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 SLCO1B7G3V0H7 640 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 HBP1O60381 514 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 ECM2O94769 699 aaPredicted RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 GHRP10912 638 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 HOXD10P28358 340 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 HSPA13P48723 471 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 DRG2P55039 364 aaKnown RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 RTP1P59025 263 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 ABCE1P61221 599 aaKnown RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 CYP4A11Q02928 519 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 THOC5Q13769 683 aaKnown RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 ZNF699Q32M78 642 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 KDM7AQ6ZMT4 941 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 SLC9A9Q8IVB4 645 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 SEPT1Q8WYJ6 367 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 CELF1Q92879 486 aaKnown RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 CCDC126Q96EE4 140 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 SENP7Q9BQF6 1050 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 PITPNM3Q9BZ71 974 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 SLC24A2Q9UI40 661 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 ANAPC7Q9UJX3 599 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 CPSF3Q9UKF6 684 aaKnown RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 ATP8A1Q9Y2Q0 1164 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 KIF28PB7ZC32 967 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 SPECC1L-ADORA2AF8WAN1 911 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 INO80B-WBP1J3KQ70 363 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 DDX39AO00148 427 aaKnown RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 MEFVO15553 781 aaPredicted RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 ZBTB24O43167 697 aaPredicted RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 MAP3K7O43318 606 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 KLHL2O95198 593 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 ICAM1P05362 532 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 MMP10P09238 476 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 SRGAP2CP0DJJ0 459 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 STMN1P16949 149 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 PSMA2P25787 234 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 FDFT1P37268 417 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 MDH1P40925 334 aaKnown RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 PRKCIP41743 596 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 TBX2Q13207 712 aaPredicted RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 DNAJC3Q13217 504 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 PDK2Q15119 407 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 RBBP5Q15291 538 aaKnown RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 SLC4A8Q2Y0W8 1093 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 ZNF484Q5JVG2 852 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 ANKRD40Q6AI12 368 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 KCTD1Q719H9 257 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 NCAPG2Q86XI2 1143 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 NME8Q8N427 588 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 PGBD4Q96DM1 585 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 LRRC37BQ96QE4 947 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 TBCBQ99426 244 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 CENPKQ9BS16 269 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 LXNQ9BS40 222 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 AGO2Q9UKV8 859 aaKnown RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 AP3M1Q9Y2T2 418 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 MTO1Q9Y2Z2 717 aaKnown RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 ORC6Q9Y5N6 252 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 ACTL7BQ9Y614 415 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 COPEO14579 308 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 NCAM2O15394 837 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 HARSP12081 509 aaKnown RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 NAMPTP43490 491 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 HK2P52789 917 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 PEX3P56589 373 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 ZBTB17Q13105 803 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 GEN1Q17RS7 908 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 KLHDC7AQ5VTJ3 777 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 TTI2Q6NXR4 508 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 RSBN1LQ6PCB5 846 aaPredicted RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 LRRC31Q6UY01 552 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 DPP9Q86TI2 863 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 LDHDQ86WU2 507 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 C12orf56Q8IXR9 622 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 ST13P4Q8IZP2 240 aaPredicted RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 MREGQ8N565 214 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 USP38Q8NB14 1042 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 CXorf38Q8TB03 319 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 RIN3Q8TB24 985 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 RNPC3Q96LT9 517 aaKnown RBP5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 RABEP2Q9H5N1 569 aa5.03□□□□□ -1.6
NDFIP1-202ENST00000503388 EPB41L4AQ9HCS5 686 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms