RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	SLFN12L	Q6IEE8	588 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	KIAA1841	Q6NSI8	718 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	STXBP4	Q6ZWJ1	553 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	DYM	Q7RTS9	669 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	ZBTB33	Q86T24	672 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	CCDC65	Q8IXS2	484 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	PDILT	Q8N807	584 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	CASP10	Q92851	521 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	TSPAN18	Q96SJ8	248 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	PANK2	Q9BZ23	570 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	PLEKHA5	Q9HAU0	1116 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	OLFML3	Q9NRN5	406 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	ANKFY1	Q9P2R3	1169 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	DPP7	Q9UHL4	492 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	CD207	Q9UJ71	328 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	EXOC7	Q9UPT5	735 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	GRXCR2	A6NFK2	248 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	MYMK	A6NI61	221 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	HIDE1	A8MVS5	230 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	PTGES	O14684	152 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	B4GALT3	O60512	393 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	C1R	P00736	705 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	CLTA	P09496	248 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	KCNE1	P15382	129 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	NUCB2	P80303	420 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	SMAD4	Q13485	552 aa	Known RBP	11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	USP41	Q3LFD5	358 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	ELMSAN1	Q6PJG2	1045 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	SHC4	Q6S5L8	630 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	ALKAL1	Q6UXT8	129 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	ZNF720	Q7Z2F6	126 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	MAP4K3	Q8IVH8	894 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	DDX27	Q96GQ7	796 aa	Known RBP	11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	PHF12	Q96QT6	1004 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	POP1	Q99575	1024 aa	Known RBP	11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	HERC2P3	Q9BVR0	1158 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	MRPL44	Q9H9J2	332 aa	Known RBP	11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	MARCH5	Q9NX47	278 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	PRKAG3	Q9UGI9	489 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	ADAM28	Q9UKQ2	775 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	PCDHA7	Q9UN72	937 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	PCDHB13	Q9Y5F0	798 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	PCDHGC5	Q9Y5F6	944 aa		11.49	□□□□□ -0.57
FXR1-222	ENST00000498658	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.49	□□□□□ -0.57	3e-6	■■■■■ 44.6
FXR1-222	ENST00000498658	SMIM28	A0A1B0GU29	152 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	FRMD3	A2A2Y4	597 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	CASTOR2	A6NHX0	329 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	TMEM189-UBE2V1	I3L0A0	370 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	TNFRSF10A	O00220	468 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	ABLIM1	O14639	778 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	TRAPPC3	O43617	180 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	CLASP2	O75122	1294 aa	Known RBP	11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	TBX10	O75333	385 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	IDE	P14735	1019 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	GLUD2	P49448	558 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	OSTN	P61366	133 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	POSTN	Q15063	836 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	PTPN14	Q15678	1187 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	E2F4	Q16254	413 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	TPRN	Q4KMQ1	711 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	RESP18	Q5W5W9	173 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	ADAL	Q6DHV7	355 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	FUT10	Q6P4F1	479 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	CNNM4	Q6P4Q7	775 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	PDXDC1	Q6P996	788 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	DCLRE1A	Q6PJP8	1040 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	SFR1	Q86XK3	245 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	CD302	Q8IX05	232 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	RNF168	Q8IYW5	571 aa	Predicted RBP	11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	SMRP1	Q8NCR6	262 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	DHX58	Q96C10	678 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	DNAJC19	Q96DA6	116 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	MSLNL	Q96KJ4	702 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	SNX27	Q96L92	541 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	SPATA32	Q96LK8	384 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	PPP1R10	Q96QC0	940 aa	Known RBP	11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	FIZ1	Q96SL8	496 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	PANK4	Q9NVE7	773 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	DZANK1	Q9NVP4	752 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	KBTBD4	Q9NVX7	518 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	CLEC1B	Q9P126	229 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	CNTN3	Q9P232	1028 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	HCFC2	Q9Y5Z7	792 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	CUL9	Q8IWT3	2517 aa		11.48	□□□□□ -0.57
FXR1-222	ENST00000498658	CIT	O14578	2027 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658		A0A087X0B3	334 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658		A0A0B4J269	797 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	OGT	O15294	1046 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	POLR2D	O15514	142 aa	Known RBP	11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	LINC01565	O15544	149 aa		11.47	□□□□□ -0.57
FXR1-222	ENST00000498658	MAP3K13	O43283	966 aa		11.47	□□□□□ -0.57

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