RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 UBIAD1Q9Y5Z9 338 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 GLTPD2A6NH11 291 aa17.56■□□□□ 0.4
COL6A1-206ENST00000498614 ANKRD63C9JTQ0 380 aa17.56■□□□□ 0.4
COL6A1-206ENST00000498614 PLS3P13797 630 aa17.56■□□□□ 0.4
COL6A1-206ENST00000498614 CHRNA3P32297 505 aa17.56■□□□□ 0.4
COL6A1-206ENST00000498614 CNGA2Q16280 664 aa17.56■□□□□ 0.4
COL6A1-206ENST00000498614 PLEKHO2Q8TD55 490 aa17.56■□□□□ 0.4
COL6A1-206ENST00000498614 STAMBPL1Q96FJ0 436 aa17.56■□□□□ 0.4
COL6A1-206ENST00000498614 TAAR1Q96RJ0 339 aa17.56■□□□□ 0.4
COL6A1-206ENST00000498614 HSPBP1Q9NZL4 362 aa17.56■□□□□ 0.4
COL6A1-206ENST00000498614 CHORDC1Q9UHD1 332 aaPredicted RBP17.56■□□□□ 0.4
COL6A1-206ENST00000498614 GGT7Q9UJ14 662 aa17.56■□□□□ 0.4
COL6A1-206ENST00000498614 SLC16A4O15374 487 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 RIPK2O43353 540 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 ECM2O94769 699 aaPredicted RBP17.55■□□□□ 0.4
COL6A1-206ENST00000498614 MYCLP12524 364 aaPredicted RBP17.55■□□□□ 0.4
COL6A1-206ENST00000498614 YWHABP31946 246 aaKnown RBP17.55■□□□□ 0.4
COL6A1-206ENST00000498614 CLNS1AP54105 237 aaKnown RBP17.55■□□□□ 0.4
COL6A1-206ENST00000498614 AUHQ13825 339 aaKnown RBP17.55■□□□□ 0.4
COL6A1-206ENST00000498614 MYBPC2Q14324 1141 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 C1orf220Q5T0J3 134 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 HAUS6Q7Z4H7 955 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 SYTL5Q8TDW5 730 aaPredicted RBP17.55■□□□□ 0.4
COL6A1-206ENST00000498614 KAT5Q92993 513 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 ADARB2Q9NS39 739 aaKnown RBP17.55■□□□□ 0.4
COL6A1-206ENST00000498614 TCRBV7S2A1N4TA0A589 114 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 GOLGA8IPA6NC78 632 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 GOLGA8JA6NMD2 632 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 CTNNA2P26232 953 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 PEX3P56589 373 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 PRKG1Q13976 671 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 EAPPQ56P03 285 aaPredicted RBP17.55■□□□□ 0.4
COL6A1-206ENST00000498614 TNFAIP8L3Q5GJ75 292 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 PCNX4Q63HM2 1172 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 ZNF746Q6NUN9 644 aaPredicted RBP17.55■□□□□ 0.4
COL6A1-206ENST00000498614 MCF2L2Q86YR7 1114 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 KIRREL3Q8IZU9 778 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 XXYLT1Q8NBI6 393 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 TMEM109Q9BVC6 243 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 MTRF1LQ9UGC7 380 aaKnown RBP17.55■□□□□ 0.4
COL6A1-206ENST00000498614 PCYOX1Q9UHG3 505 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 SYNGAP1Q96PV0 1343 aa17.55■□□□□ 0.4
COL6A1-206ENST00000498614 RASGRF2O14827 1237 aa17.54■□□□□ 0.4
COL6A1-206ENST00000498614 UBOX5O94941 541 aa17.54■□□□□ 0.4
COL6A1-206ENST00000498614 CETN1Q12798 172 aa17.54■□□□□ 0.4
COL6A1-206ENST00000498614 EPC2Q52LR7 807 aa17.54■□□□□ 0.4
COL6A1-206ENST00000498614 PLA2G4FQ68DD2 849 aa17.54■□□□□ 0.4
COL6A1-206ENST00000498614 NIPA1Q7RTP0 329 aa17.54■□□□□ 0.4
COL6A1-206ENST00000498614 FMNL3Q8IVF7 1028 aa17.54■□□□□ 0.4
COL6A1-206ENST00000498614 CTTNBP2NLQ9P2B4 639 aa17.54■□□□□ 0.4
COL6A1-206ENST00000498614 WDR46O15213 610 aaKnown RBP17.54■□□□□ 0.4
COL6A1-206ENST00000498614 ATP9AO75110 1047 aa17.54■□□□□ 0.4
COL6A1-206ENST00000498614 MAPTP10636 758 aaKnown RBP17.54■□□□□ 0.4
COL6A1-206ENST00000498614 RFX1P22670 979 aa17.54■□□□□ 0.4
COL6A1-206ENST00000498614 RPS6P62753 249 aaKnown RBP17.54■□□□□ 0.4
COL6A1-206ENST00000498614 KCNJ2P63252 427 aa17.54■□□□□ 0.4
COL6A1-206ENST00000498614 ALCAMQ13740 583 aa17.54■□□□□ 0.4
COL6A1-206ENST00000498614 TNFAIP1Q13829 316 aa17.54■□□□□ 0.4
COL6A1-206ENST00000498614 LRRC14Q15048 493 aa17.54■□□□□ 0.4
COL6A1-206ENST00000498614 CLUL1Q15846 466 aa17.54■□□□□ 0.4
COL6A1-206ENST00000498614 CCDC137Q6PK04 289 aaKnown RBP17.54■□□□□ 0.4
COL6A1-206ENST00000498614 RPUSD2Q8IZ73 545 aaKnown RBP17.54■□□□□ 0.4
COL6A1-206ENST00000498614 ZNF526Q8TF50 670 aaPredicted RBP17.54■□□□□ 0.4
COL6A1-206ENST00000498614 ZSWIM1Q9BR11 485 aa17.54■□□□□ 0.4
COL6A1-206ENST00000498614 CFAP73A6NFT4 308 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 PODXLO00592 558 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 SNX3O60493 162 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 FTLP02792 175 aaPredicted RBP17.53■□□□□ 0.4
COL6A1-206ENST00000498614 POTEJP0CG39 1038 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 GBP2P32456 591 aaPredicted RBP17.53■□□□□ 0.4
COL6A1-206ENST00000498614 PGM5Q15124 567 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 C11orf63Q6NUN7 778 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 EXOC3L1Q86VI1 746 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 RHOT2Q8IXI1 618 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 UBL4BQ8N7F7 174 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 MGARPQ8TDB4 240 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 NSRP1Q9H0G5 558 aaKnown RBP17.53■□□□□ 0.4
COL6A1-206ENST00000498614 PTPN22Q9Y2R2 807 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 L3MBTL1Q9Y468 752 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 OAS1P00973 400 aaKnown RBP17.53■□□□□ 0.4
COL6A1-206ENST00000498614 ADRB2P07550 413 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 RARAP10276 462 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 RARGP13631 454 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 EPHX2P34913 555 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 NCALDP61601 193 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 GTF2BQ00403 316 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 RIPK1Q13546 671 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 FAM102BQ5T8I3 360 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 CCDC25Q86WR0 208 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 CPNE8Q86YQ8 564 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 KIFC3Q9BVG8 833 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 TMEM117Q9H0C3 514 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 SLC38A10Q9HBR0 1119 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 ACP6Q9NPH0 428 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 PARP2Q9UGN5 583 aa17.53■□□□□ 0.4
COL6A1-206ENST00000498614 MIF4GDA9UHW6 222 aaKnown RBP17.52■□□□□ 0.4
COL6A1-206ENST00000498614 ADM5C9JUS6 153 aa17.52■□□□□ 0.4
COL6A1-206ENST00000498614 HSPA6P17066 643 aa17.52■□□□□ 0.4
COL6A1-206ENST00000498614 COMTP21964 271 aa17.52■□□□□ 0.4
COL6A1-206ENST00000498614 KCNJ1P48048 391 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms