RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 SOWAHDA6NJG2 315 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 TISP43B9A030 160 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 GPR32O75388 356 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 NOL4O94818 638 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 CLSTN1O94985 981 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 INHAP05111 366 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 SKIP12755 728 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 TNNT1P13805 278 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 CCND3P30281 292 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-210ENST00000498259 SOX5P35711 763 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 PRKCIP41743 596 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 PIK3CAP42336 1068 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 ACLYP53396 1101 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 DLG4P78352 724 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 PPP3CAQ08209 521 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 TUBB2AQ13885 445 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 IFI16Q16666 785 aaKnown RBP9.12□□□□□ -0.95
SF3A1-210ENST00000498259 KIZQ2M2Z5 673 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 NBPF20Q3BBV1 942 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 EPC2Q52LR7 807 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 E4F1Q66K89 784 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-210ENST00000498259 CXCL17Q6UXB2 119 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 PPM1KQ8N3J5 372 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 CCDC155Q8N6L0 562 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 DNAJB3Q8WWF6 145 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 PPP1R13BQ96KQ4 1090 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.12□□□□□ -0.95
SF3A1-210ENST00000498259 TUBB2BQ9BVA1 445 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 CELF4Q9BZC1 486 aaKnown RBP9.12□□□□□ -0.95
SF3A1-210ENST00000498259 RNF39Q9H2S5 420 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 IKZF4Q9H2S9 585 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 ADAMTS10Q9H324 1103 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 TRMT1Q9NXH9 659 aaKnown RBP9.12□□□□□ -0.95
SF3A1-210ENST00000498259 C2CD2Q9Y426 696 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 TRPV2Q9Y5S1 764 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 ADGRG1Q9Y653 693 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 SQORQ9Y6N5 450 aa9.12□□□□□ -0.95
SF3A1-210ENST00000498259 F8VZ95 297 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 TREHO43280 583 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 TSPAN1O60635 241 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 LCA5LO95447 670 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 ADRB2P07550 413 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 GJB1P08034 283 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 STAG3L1P0CL83 205 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 ZSCAN20P17040 1043 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-210ENST00000498259 HSPA6P17066 643 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 ATF7P17544 494 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-210ENST00000498259 ARF4P18085 180 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-210ENST00000498259 ATICP31939 592 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 GRM5P41594 1212 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 KIF11P52732 1056 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 MRPS6P82932 125 aaKnown RBP9.11□□□□□ -0.95
SF3A1-210ENST00000498259 PTK7Q13308 1070 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 ITGA7Q13683 1181 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 NCOA4Q13772 614 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 BMS1Q14692 1282 aaKnown RBP9.11□□□□□ -0.95
SF3A1-210ENST00000498259 DRAP1Q14919 205 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-210ENST00000498259 SLC18A3Q16572 532 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 PTGISQ16647 500 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 WDR59Q6PJI9 974 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 CRELD2Q6UXH1 353 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-210ENST00000498259 C15orf39Q6ZRI6 1047 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 SERINC5Q86VE9 423 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 THNSL1Q8IYQ7 743 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 LENG1Q96BZ8 264 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-210ENST00000498259 FAM212AQ96EL1 285 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 ZBTB45Q96K62 511 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-210ENST00000498259 OSMRQ99650 979 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 IFIH1Q9BYX4 1025 aaKnown RBP9.11□□□□□ -0.95
SF3A1-210ENST00000498259 CDT1Q9H211 546 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 PDZD7Q9H5P4 517 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 PDE11AQ9HCR9 933 aa9.11□□□□□ -0.95
SF3A1-210ENST00000498259 KAT6AQ92794 2004 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 ATP8B3O60423 1300 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 A0A0U1RQG5 324 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-210ENST00000498259 RBAK-RBAKDNI3L0D1 243 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 RPS6KA5O75582 802 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 C4BPAP04003 597 aaKnown RBP9.1□□□□□ -0.95
SF3A1-210ENST00000498259 ACTN1P12814 892 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 TNFAIP3P21580 790 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 EIF4A3P38919 411 aaKnown RBP9.1□□□□□ -0.95
SF3A1-210ENST00000498259 MAGEA1P43355 309 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 VAV2P52735 878 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 JAM2P57087 298 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 ETF1P62495 437 aaKnown RBP9.1□□□□□ -0.95
SF3A1-210ENST00000498259 TFAMQ00059 246 aaKnown RBP9.1□□□□□ -0.95
SF3A1-210ENST00000498259 ARID5AQ03989 594 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 PTK2Q05397 1052 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 GOLGA8FQ08AF8 430 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 GOLGA8DPQ0D2H9 430 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 MYO1EQ12965 1108 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 TMEM132DQ14C87 1099 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 SNX17Q15036 470 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 PKN2Q16513 984 aaKnown RBP9.1□□□□□ -0.95
SF3A1-210ENST00000498259 AMHR2Q16671 573 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 CCDC122Q5T0U0 273 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 IQCEQ6IPM2 695 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 CCSAPQ6IQ19 270 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-210ENST00000498259 PHLDB3Q6NSJ2 640 aa9.1□□□□□ -0.95
SF3A1-210ENST00000498259 RAD9BQ6WBX8 426 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms