RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 CRIP3Q6Q6R5 217 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 RHOT1Q8IXI2 618 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 FBXO18Q8NFZ0 1043 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 SLC35B2Q8TB61 432 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 CCHCR1Q8TD31 782 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 STON2Q8WXE9 905 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 TFAP2CQ92754 450 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 ZNF503Q96F45 646 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 PLEKHG4BQ96PX9 1271 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 LDAHQ9H6V9 325 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 CEP72Q9P209 647 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 AJAP1Q9UKB5 411 aaPredicted RBP3.8□□□□□ -1.8
RIF1-212ENST00000498041 IPPQ9Y573 584 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 BICRAQ9NZM4 1560 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 WIZO95785 1651 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 CCDC154A6NI56 674 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 HTRA2O43464 458 aaPredicted RBP3.79□□□□□ -1.8
RIF1-212ENST00000498041 GPR32O75388 356 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 ALDH1L1O75891 902 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 RECQL4O94761 1208 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 C1SP09871 688 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 RAP2AP10114 183 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 ACVRL1P37023 503 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 TOB2Q14106 344 aaPredicted RBP3.79□□□□□ -1.8
RIF1-212ENST00000498041 UAP1L1Q3KQV9 507 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 RABL3Q5HYI8 236 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 MIIPQ5JXC2 388 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 TMEM240Q5SV17 173 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 ATXN7L2Q5T6C5 722 aaPredicted RBP3.79□□□□□ -1.8
RIF1-212ENST00000498041 OTUD7BQ6GQQ9 843 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 PPP4R3AQ6IN85 833 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 MIER2Q8N344 545 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 OR10H5Q8NGA6 315 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 CACTINQ8WUQ7 758 aaKnown RBP3.79□□□□□ -1.8
RIF1-212ENST00000498041 NDC1Q9BTX1 674 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 MRI1Q9BV20 369 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 CSRNP2Q9H175 543 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 AASDHPPTQ9NRN7 309 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 TDP1Q9NUW8 608 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 POGKQ9P215 609 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 EIF2B4Q9UI10 523 aaKnown RBP3.79□□□□□ -1.8
RIF1-212ENST00000498041 LIMCH1Q9UPQ0 1083 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 LUC7L2Q9Y383 392 aaKnown RBP3.79□□□□□ -1.8
RIF1-212ENST00000498041 PCDHA13Q9Y5I0 950 aa3.79□□□□□ -1.8
RIF1-212ENST00000498041 MYBBP1AQ9BQG0 1328 aaKnown RBP3.78□□□□□ -1.8
RIF1-212ENST00000498041 MROH2BQ7Z745 1585 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 GRXCR1A8MXD5 290 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 WNT10BO00744 389 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 TRIM24O15164 1050 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 SGTAO43765 313 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 ZRANB2O95218 330 aaKnown RBP eCLIP3.78□□□□□ -1.8
RIF1-212ENST00000498041 PEX11BO96011 259 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 AMY1AP04745 511 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 RPLP2P05387 115 aaKnown RBP3.78□□□□□ -1.8
RIF1-212ENST00000498041 ATP5JP18859 108 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 DDCP20711 480 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 FPR1P21462 350 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 EDNRBP24530 442 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 PCSK1P29120 753 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 ALDH1A3P47895 512 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 RAP2BP61225 183 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 CDC42EP1Q00587 391 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 MTM1Q13496 603 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 TTF1Q15361 905 aaPredicted RBP3.78□□□□□ -1.8
RIF1-212ENST00000498041 CSRP2Q16527 193 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 ATP2B3Q16720 1220 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 C3orf36Q3SXR2 165 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 RSPH3Q86UC2 560 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 DRC7Q8IY82 874 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 CMTR2Q8IYT2 770 aaKnown RBP3.78□□□□□ -1.8
RIF1-212ENST00000498041 ANKRD13AQ8IZ07 590 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 CPA6Q8N4T0 437 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 ZGPATQ8N5A5 531 aaKnown RBP3.78□□□□□ -1.8
RIF1-212ENST00000498041 HOOK2Q96ED9 719 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 FAM193BQ96PV7 902 aaPredicted RBP3.78□□□□□ -1.8
RIF1-212ENST00000498041 DCLRE1CQ96SD1 692 aaKnown RBP3.78□□□□□ -1.8
RIF1-212ENST00000498041 TCF7L1Q9HCS4 588 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 FAM30AQ9NZY2 134 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.78□□□□□ -1.8
RIF1-212ENST00000498041 SERPINB13Q9UIV8 391 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 SORCS3Q9UPU3 1222 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 ACTL7AQ9Y615 435 aa3.78□□□□□ -1.8
RIF1-212ENST00000498041 PNPLA7Q6ZV29 1317 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 MYO15BQ96JP2 1530 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 E2F8A0AVK6 867 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 DRGXA6NNA5 263 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 DIRC3C9JPN6 131 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 LEFTY2O00292 366 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 FAM20BO75063 409 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 SCAF4O95104 1147 aaKnown RBP3.77□□□□□ -1.81
RIF1-212ENST00000498041 IL33O95760 270 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 POMCP01189 267 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 VCAM1P19320 739 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 APOBEC3AP31941 199 aaPredicted RBP3.77□□□□□ -1.81
RIF1-212ENST00000498041 CTXN1P60606 82 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 DGCR2P98153 550 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 ATP8B2P98198 1209 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 NHLH2Q02577 135 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 MCL1Q07820 350 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 TARDBPQ13148 414 aaKnown RBP eCLIP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms