RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 FEZ1Q99689 392 aa5.62□□□□□ -1.51
SMC4-227ENST00000497984 TOPORSQ9NS56 1045 aaPredicted RBP5.62□□□□□ -1.51
SMC4-227ENST00000497984 RNF181Q9P0P0 153 aa5.62□□□□□ -1.51
SMC4-227ENST00000497984 A0A087X0B3 334 aa5.61□□□□□ -1.51
SMC4-227ENST00000497984 PHF2O75151 1096 aa5.61□□□□□ -1.51
SMC4-227ENST00000497984 SNRPA1P09661 255 aaKnown RBP5.61□□□□□ -1.51
SMC4-227ENST00000497984 ALOX15P16050 662 aaPredicted RBP5.61□□□□□ -1.51
SMC4-227ENST00000497984 BPIP17213 487 aa5.61□□□□□ -1.51
SMC4-227ENST00000497984 FDXRP22570 491 aa5.61□□□□□ -1.51
SMC4-227ENST00000497984 ELLP55199 621 aaPredicted RBP5.61□□□□□ -1.51
SMC4-227ENST00000497984 FSCN1Q16658 493 aaKnown RBP5.61□□□□□ -1.51
SMC4-227ENST00000497984 UGT8Q16880 541 aa5.61□□□□□ -1.51
SMC4-227ENST00000497984 ATP13A4Q4VNC1 1196 aa5.61□□□□□ -1.51
SMC4-227ENST00000497984 Q6ZVL8 140 aa5.61□□□□□ -1.51
SMC4-227ENST00000497984 NAF1Q96HR8 494 aaKnown RBP5.61□□□□□ -1.51
SMC4-227ENST00000497984 PHACTR3Q96KR7 559 aa5.61□□□□□ -1.51
SMC4-227ENST00000497984 Q96MF0 132 aa5.61□□□□□ -1.51
SMC4-227ENST00000497984 TLK1Q9UKI8 766 aa5.61□□□□□ -1.51
SMC4-227ENST00000497984 CCDC78A2IDD5 438 aa5.6□□□□□ -1.51
SMC4-227ENST00000497984 CDC45O75419 566 aa5.6□□□□□ -1.51
SMC4-227ENST00000497984 PTPN7P35236 360 aa5.6□□□□□ -1.51
SMC4-227ENST00000497984 MXRA7P84157 204 aa5.6□□□□□ -1.51
SMC4-227ENST00000497984 OCA2Q04671 838 aa5.6□□□□□ -1.51
SMC4-227ENST00000497984 TSHZ3Q63HK5 1081 aa5.6□□□□□ -1.51
SMC4-227ENST00000497984 GLCCI1Q86VQ1 547 aa5.6□□□□□ -1.51
SMC4-227ENST00000497984 OR7D4Q8NG98 312 aa5.6□□□□□ -1.51
SMC4-227ENST00000497984 LEO1Q8WVC0 666 aaPredicted RBP5.6□□□□□ -1.51
SMC4-227ENST00000497984 RIN2Q8WYP3 895 aaPredicted RBP5.6□□□□□ -1.51
SMC4-227ENST00000497984 NELL1Q92832 810 aa5.6□□□□□ -1.51
SMC4-227ENST00000497984 ZSWIM1Q9BR11 485 aa5.6□□□□□ -1.51
SMC4-227ENST00000497984 ALOXE3Q9BYJ1 711 aa5.6□□□□□ -1.51
SMC4-227ENST00000497984 BCO1Q9HAY6 547 aa5.6□□□□□ -1.51
SMC4-227ENST00000497984 DPP7Q9UHL4 492 aa5.6□□□□□ -1.51
SMC4-227ENST00000497984 MGST3O14880 152 aa5.59□□□□□ -1.51
SMC4-227ENST00000497984 ENPP1P22413 925 aa5.59□□□□□ -1.51
SMC4-227ENST00000497984 ADSLP30566 484 aaPredicted RBP5.59□□□□□ -1.51
SMC4-227ENST00000497984 SIM1P81133 766 aaPredicted RBP5.59□□□□□ -1.51
SMC4-227ENST00000497984 SP140Q13342 867 aa5.59□□□□□ -1.51
SMC4-227ENST00000497984 ZNF169Q14929 603 aaPredicted RBP5.59□□□□□ -1.51
SMC4-227ENST00000497984 MED25Q71SY5 747 aa5.59□□□□□ -1.51
SMC4-227ENST00000497984 KIAA0907Q7Z7F0 614 aaPredicted RBP5.59□□□□□ -1.51
SMC4-227ENST00000497984 CLRN3Q8NCR9 226 aa5.59□□□□□ -1.51
SMC4-227ENST00000497984 GPR156Q8NFN8 814 aa5.59□□□□□ -1.51
SMC4-227ENST00000497984 FBXO18Q8NFZ0 1043 aa5.59□□□□□ -1.51
SMC4-227ENST00000497984 CAGE1Q8TC20 777 aa5.59□□□□□ -1.51
SMC4-227ENST00000497984 TSPEARQ8WU66 669 aa5.59□□□□□ -1.51
SMC4-227ENST00000497984 FUBP3Q96I24 572 aaKnown RBP eCLIP5.59□□□□□ -1.51
SMC4-227ENST00000497984 DRC1Q96MC2 740 aa5.59□□□□□ -1.51
SMC4-227ENST00000497984 TMEM74BQ9NUR3 256 aa5.59□□□□□ -1.51
SMC4-227ENST00000497984 SCOCQ9UIL1 159 aa5.59□□□□□ -1.51
SMC4-227ENST00000497984 FRMD4BQ9Y2L6 1034 aa5.59□□□□□ -1.51
SMC4-227ENST00000497984 A0A1B0GTW7 788 aa5.58□□□□□ -1.52
SMC4-227ENST00000497984 AKR1B10O60218 316 aa5.58□□□□□ -1.52
SMC4-227ENST00000497984 C1QL1O75973 258 aa5.58□□□□□ -1.52
SMC4-227ENST00000497984 MATN4O95460 622 aa5.58□□□□□ -1.52
SMC4-227ENST00000497984 C1RP00736 705 aa5.58□□□□□ -1.52
SMC4-227ENST00000497984 IGLV2-14P01704 120 aa5.58□□□□□ -1.52
SMC4-227ENST00000497984 RAP2BP61225 183 aa5.58□□□□□ -1.52
SMC4-227ENST00000497984 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.58□□□□□ -1.524e-9■■■■■ 118.1
SMC4-227ENST00000497984 Q6ZNX1 250 aa5.58□□□□□ -1.52
SMC4-227ENST00000497984 BOD1Q96IK1 185 aa5.58□□□□□ -1.52
SMC4-227ENST00000497984 RAX2Q96IS3 184 aa5.58□□□□□ -1.52
SMC4-227ENST00000497984 ACAP3Q96P50 834 aa5.58□□□□□ -1.52
SMC4-227ENST00000497984 DUSP26Q9BV47 211 aa5.58□□□□□ -1.52
SMC4-227ENST00000497984 FOXJ2Q9P0K8 574 aa5.58□□□□□ -1.52
SMC4-227ENST00000497984 TESQ9UGI8 421 aaKnown RBP5.58□□□□□ -1.52
SMC4-227ENST00000497984 SETD1BQ9UPS6 1966 aaKnown RBP5.57□□□□□ -1.52
SMC4-227ENST00000497984 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.57□□□□□ -1.52
SMC4-227ENST00000497984 CDK4P11802 303 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 GCSHP23434 173 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 SREBF1P36956 1147 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 ID4P47928 161 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 RARRES1P49788 294 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 CXADRP78310 365 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 CDK17Q00537 523 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 NHLH1Q02575 133 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 DHCR24Q15392 516 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 SPDYE7PQ495Y7 208 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 RRP12Q5JTH9 1297 aaKnown RBP5.57□□□□□ -1.52
SMC4-227ENST00000497984 AFMIDQ63HM1 303 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 JAZF1Q86VZ6 243 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 DRC7Q8IY82 874 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 HOXB13Q92826 284 aaPredicted RBP5.57□□□□□ -1.52
SMC4-227ENST00000497984 MRI1Q9BV20 369 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 SPATA5L1Q9BVQ7 753 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 SEMA4GQ9NTN9 838 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 FAM30AQ9NZY2 134 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 SIK3Q9Y2K2 1263 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 NOX1Q9Y5S8 564 aa5.57□□□□□ -1.52
SMC4-227ENST00000497984 MRPL42Q9Y6G3 142 aaKnown RBP5.57□□□□□ -1.52
SMC4-227ENST00000497984 NEMP1O14524 444 aa5.56□□□□□ -1.52
SMC4-227ENST00000497984 PDE8AO60658 829 aa5.56□□□□□ -1.52
SMC4-227ENST00000497984 FGFR4P22455 802 aa5.56□□□□□ -1.52
SMC4-227ENST00000497984 ECHS1P30084 290 aa5.56□□□□□ -1.52
SMC4-227ENST00000497984 GUCY1A2P33402 732 aa5.56□□□□□ -1.52
SMC4-227ENST00000497984 ADRM1Q16186 407 aa5.56□□□□□ -1.52
SMC4-227ENST00000497984 PAPD7Q5XG87 772 aaKnown RBP5.56□□□□□ -1.52
SMC4-227ENST00000497984 NACC2Q96BF6 587 aa5.56□□□□□ -1.52
SMC4-227ENST00000497984 RNPEPQ9H4A4 650 aa5.56□□□□□ -1.52
SMC4-227ENST00000497984 MAPRE3Q9UPY8 281 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms