RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 RFXAPO00287 272 aa21.82■■□□□ 1.08
CTSD-206ENST00000497544 HOXA2O43364 376 aa21.82■■□□□ 1.08
CTSD-206ENST00000497544 CLTAP09496 248 aa21.82■■□□□ 1.08
CTSD-206ENST00000497544 MYOGP15173 224 aa21.82■■□□□ 1.08
CTSD-206ENST00000497544 ATF7P17544 494 aaPredicted RBP21.82■■□□□ 1.08
CTSD-206ENST00000497544 POU3F3P20264 500 aaPredicted RBP21.82■■□□□ 1.08
CTSD-206ENST00000497544 AKAP5P24588 427 aa21.82■■□□□ 1.08
CTSD-206ENST00000497544 CYP2J2P51589 502 aa21.82■■□□□ 1.08
CTSD-206ENST00000497544 SEZ6Q53EL9 994 aa21.82■■□□□ 1.08
CTSD-206ENST00000497544 C12orf56Q8IXR9 622 aa21.82■■□□□ 1.08
CTSD-206ENST00000497544 ABI1Q8IZP0 508 aa21.82■■□□□ 1.08
CTSD-206ENST00000497544 CEP120Q8N960 986 aa21.82■■□□□ 1.08
CTSD-206ENST00000497544 RNF39Q9H2S5 420 aa21.82■■□□□ 1.08
CTSD-206ENST00000497544 HSPBP1Q9NZL4 362 aa21.82■■□□□ 1.08
CTSD-206ENST00000497544 CTNND2Q9UQB3 1225 aa21.82■■□□□ 1.08
CTSD-206ENST00000497544 GIT1Q9Y2X7 761 aa21.82■■□□□ 1.08
CTSD-206ENST00000497544 ZNF318Q5VUA4 2279 aa21.81■■□□□ 1.08
CTSD-206ENST00000497544 GOLGA8IPA6NC78 632 aa21.81■■□□□ 1.08
CTSD-206ENST00000497544 GOLGA8JA6NMD2 632 aa21.81■■□□□ 1.08
CTSD-206ENST00000497544 RPL13P26373 211 aaKnown RBP21.81■■□□□ 1.08
CTSD-206ENST00000497544 ACOT2P49753 483 aa21.81■■□□□ 1.08
CTSD-206ENST00000497544 PAK1Q13153 545 aa21.81■■□□□ 1.08
CTSD-206ENST00000497544 HSP90AA2PQ14568 343 aaPredicted RBP21.81■■□□□ 1.08
CTSD-206ENST00000497544 STX1AQ16623 288 aa21.81■■□□□ 1.08
CTSD-206ENST00000497544 DPCR1Q3MIW9 517 aa21.81■■□□□ 1.08
CTSD-206ENST00000497544 ANKRD40Q6AI12 368 aa21.81■■□□□ 1.08
CTSD-206ENST00000497544 AGMOQ6ZNB7 445 aa21.81■■□□□ 1.08
CTSD-206ENST00000497544 TMCO2Q7Z6W1 182 aaPredicted RBP21.81■■□□□ 1.08
CTSD-206ENST00000497544 CRIPAKQ8N1N5 446 aa21.81■■□□□ 1.08
CTSD-206ENST00000497544 GPD1LQ8N335 351 aa21.81■■□□□ 1.08
CTSD-206ENST00000497544 SAAL1Q96ER3 474 aa21.81■■□□□ 1.08
CTSD-206ENST00000497544 FAM213AQ9BRX8 229 aa21.81■■□□□ 1.08
CTSD-206ENST00000497544 RPF1Q9H9Y2 349 aaKnown RBP21.81■■□□□ 1.08
CTSD-206ENST00000497544 RSAD1Q9HA92 442 aa21.81■■□□□ 1.08
CTSD-206ENST00000497544 KIAA1586Q9HCI6 787 aa21.81■■□□□ 1.08
CTSD-206ENST00000497544 CFAP54Q96N23 3096 aa21.81■■□□□ 1.08
CTSD-206ENST00000497544 CITO14578 2027 aa21.8■■□□□ 1.08
CTSD-206ENST00000497544 SYCE3A1L190 88 aa21.8■■□□□ 1.08
CTSD-206ENST00000497544 EXTL3O43909 919 aa21.8■■□□□ 1.08
CTSD-206ENST00000497544 NR3C1P04150 777 aa21.8■■□□□ 1.08
CTSD-206ENST00000497544 FGFR1P11362 822 aa21.8■■□□□ 1.08
CTSD-206ENST00000497544 STX17P56962 302 aa21.8■■□□□ 1.08
CTSD-206ENST00000497544 LRRC63Q05C16 580 aa21.8■■□□□ 1.08
CTSD-206ENST00000497544 TYRO3Q06418 890 aa21.8■■□□□ 1.08
CTSD-206ENST00000497544 ADAM9Q13443 819 aa21.8■■□□□ 1.08
CTSD-206ENST00000497544 MYBPC2Q14324 1141 aa21.8■■□□□ 1.08
CTSD-206ENST00000497544 EDRF1Q3B7T1 1238 aa21.8■■□□□ 1.08
CTSD-206ENST00000497544 CT47A1Q5JQC4 288 aaPredicted RBP21.8■■□□□ 1.08
CTSD-206ENST00000497544 GLB1LQ6UWU2 654 aa21.8■■□□□ 1.08
CTSD-206ENST00000497544 HERC6Q8IVU3 1022 aa21.8■■□□□ 1.08
CTSD-206ENST00000497544 XXYLT1Q8NBI6 393 aa21.8■■□□□ 1.08
CTSD-206ENST00000497544 HLA-CQ95604 372 aa21.8■■□□□ 1.08
CTSD-206ENST00000497544 KCNH6Q9H252 994 aa21.8■■□□□ 1.08
CTSD-206ENST00000497544 TOPORSQ9NS56 1045 aaPredicted RBP21.8■■□□□ 1.08
CTSD-206ENST00000497544 TRIP11Q15643 1979 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 TRIM49BA6NDI0 452 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 MEIS3P2A8K0S8 358 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 TULP1O00294 542 aaPredicted RBP21.79■■□□□ 1.08
CTSD-206ENST00000497544 EXOC3O60645 756 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 OFD1O75665 1012 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 DGKIO75912 1065 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 RECQL4O94761 1208 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 GJB5O95377 273 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 CCDC192P0DO97 292 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 TNFSF9P41273 254 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 NFIL3Q16649 462 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 ZSCAN23Q3MJ62 389 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 SLC9A9Q8IVB4 645 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 TMEM192Q8IY95 271 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 RDH13Q8NBN7 331 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 FAM212AQ96EL1 285 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 RPS6KC1Q96S38 1066 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 YME1L1Q96TA2 773 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 DMAC2Q9NW81 257 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 KLK14Q9P0G3 267 aa21.79■■□□□ 1.08
CTSD-206ENST00000497544 CPSF3Q9UKF6 684 aaKnown RBP21.79■■□□□ 1.08
CTSD-206ENST00000497544 ZNF233A6NK53 670 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 CETN3O15182 167 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 NR2F2P24468 414 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 PMS1P54277 932 aaKnown RBP21.78■■□□□ 1.08
CTSD-206ENST00000497544 FKBP3Q00688 224 aaKnown RBP21.78■■□□□ 1.08
CTSD-206ENST00000497544 POU5F1Q01860 360 aaKnown RBP21.78■■□□□ 1.08
CTSD-206ENST00000497544 ZCWPW2Q504Y3 356 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 ZBTB41Q5SVQ8 909 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 CEP135Q66GS9 1140 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 ZSWIM2Q8NEG5 633 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 URGCPQ8TCY9 931 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 HELQQ8TDG4 1101 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 GAD1Q99259 594 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 PHOX2BQ99453 314 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 RAD9AQ99638 391 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 TMEM117Q9H0C3 514 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 RWDD2AQ9UIY3 292 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 INPP5FQ9Y2H2 1132 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 FRMD4BQ9Y2L6 1034 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 INSL6Q9Y581 213 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 PTPRSQ13332 1948 aa21.78■■□□□ 1.08
CTSD-206ENST00000497544 TBKBP1A7MCY6 615 aa21.77■■□□□ 1.08
CTSD-206ENST00000497544 FAM189A1O60320 539 aa21.77■■□□□ 1.08
CTSD-206ENST00000497544 ERCC5P28715 1186 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms