RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 CBWD2Q8IUF1 395 aa21.44■■□□□ 1.02
SCAMP3-209ENST00000497470 SAAL1Q96ER3 474 aa21.44■■□□□ 1.02
SCAMP3-209ENST00000497470 SLC9A7Q96T83 725 aa21.44■■□□□ 1.02
SCAMP3-209ENST00000497470 HSD3B7Q9H2F3 369 aa21.44■■□□□ 1.02
SCAMP3-209ENST00000497470 RSAD1Q9HA92 442 aa21.44■■□□□ 1.02
SCAMP3-209ENST00000497470 FANCLQ9NW38 375 aa21.44■■□□□ 1.02
SCAMP3-209ENST00000497470 SNTG2Q9NY99 539 aa21.44■■□□□ 1.02
SCAMP3-209ENST00000497470 XPOTO43592 962 aaKnown RBP21.43■■□□□ 1.02
SCAMP3-209ENST00000497470 CYP3A5P20815 502 aa21.43■■□□□ 1.02
SCAMP3-209ENST00000497470 PAX3P23760 479 aa21.43■■□□□ 1.02
SCAMP3-209ENST00000497470 KCNJ6P48051 423 aa21.43■■□□□ 1.02
SCAMP3-209ENST00000497470 ZBTB6Q15916 424 aa21.43■■□□□ 1.02
SCAMP3-209ENST00000497470 UVSSAQ2YD98 709 aa21.43■■□□□ 1.02
SCAMP3-209ENST00000497470 TCP11X2Q5H9J9 407 aa21.43■■□□□ 1.02
SCAMP3-209ENST00000497470 GLB1LQ6UWU2 654 aa21.43■■□□□ 1.02
SCAMP3-209ENST00000497470 WDR49Q8IV35 697 aa21.43■■□□□ 1.02
SCAMP3-209ENST00000497470 CEP120Q8N960 986 aa21.43■■□□□ 1.02
SCAMP3-209ENST00000497470 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.43■■□□□ 1.029e-9■□□□□ 10
SCAMP3-209ENST00000497470 SLC38A7Q9NVC3 462 aa21.43■■□□□ 1.02
SCAMP3-209ENST00000497470 P4HA2O15460 535 aa21.42■■□□□ 1.02
SCAMP3-209ENST00000497470 MAGEA10P43363 369 aaPredicted RBP21.42■■□□□ 1.02
SCAMP3-209ENST00000497470 VAMP7P51809 220 aa21.42■■□□□ 1.02
SCAMP3-209ENST00000497470 CACTINQ8WUQ7 758 aaKnown RBP21.42■■□□□ 1.02
SCAMP3-209ENST00000497470 CNOT6LQ96LI5 555 aaKnown RBP21.42■■□□□ 1.02
SCAMP3-209ENST00000497470 MRPL9Q9BYD2 267 aaKnown RBP21.42■■□□□ 1.02
SCAMP3-209ENST00000497470 TMEM117Q9H0C3 514 aa21.42■■□□□ 1.02
SCAMP3-209ENST00000497470 LIMA1Q9UHB6 759 aaKnown RBP21.42■■□□□ 1.02
SCAMP3-209ENST00000497470 LRFN2Q9ULH4 789 aa21.42■■□□□ 1.02
SCAMP3-209ENST00000497470 OFD1O75665 1012 aa21.41■■□□□ 1.02
SCAMP3-209ENST00000497470 ACRP10323 421 aa21.41■■□□□ 1.02
SCAMP3-209ENST00000497470 TNFSF9P41273 254 aa21.41■■□□□ 1.02
SCAMP3-209ENST00000497470 EPHB4P54760 987 aa21.41■■□□□ 1.02
SCAMP3-209ENST00000497470 CCDC40Q4G0X9 1142 aa21.41■■□□□ 1.02
SCAMP3-209ENST00000497470 ZBTB41Q5SVQ8 909 aa21.41■■□□□ 1.02
SCAMP3-209ENST00000497470 FNBP1Q96RU3 617 aa21.41■■□□□ 1.02
SCAMP3-209ENST00000497470 CGRRF1Q99675 332 aa21.41■■□□□ 1.02
SCAMP3-209ENST00000497470 RNF39Q9H2S5 420 aa21.41■■□□□ 1.02
SCAMP3-209ENST00000497470 SAMSN1Q9NSI8 373 aaKnown RBP21.41■■□□□ 1.02
SCAMP3-209ENST00000497470 RALGAPA2Q2PPJ7 1873 aa21.41■■□□□ 1.02
SCAMP3-209ENST00000497470 COL4A6Q14031 1691 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 CITO14578 2027 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 GOLGA8IPA6NC78 632 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 GOLGA8JA6NMD2 632 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 LACTBL1A8MY62 500 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 KCNJ18B7U540 433 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 N4BP1O75113 896 aaKnown RBP21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 DGKIO75912 1065 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 TPM2P07951 284 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 CXCL8P10145 99 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 HARSP12081 509 aaKnown RBP21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 GRIK3Q13003 919 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 KCNJ12Q14500 433 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 MAN2A1Q16706 1144 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 LUZP1Q86V48 1076 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 TMEM192Q8IY95 271 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 GSTCDQ8NEC7 633 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 ZSWIM2Q8NEG5 633 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 SLC35C1Q96A29 364 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 ZNF689Q96CS4 500 aaPredicted RBP21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 RNF19AQ9NV58 838 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 INTS13Q9NVM9 706 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 PARP2Q9UGN5 583 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 UBQLN1Q9UMX0 589 aaKnown RBP21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 HES2Q9Y543 173 aa21.4■■□□□ 1.02
SCAMP3-209ENST00000497470 MKI67P46013 3256 aaKnown RBP21.39■■□□□ 1.02
SCAMP3-209ENST00000497470 SMIM28A0A1B0GU29 152 aa21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 GTPBP10A4D1E9 387 aaKnown RBP21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 ARL5CA6NH57 179 aa21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 THP07101 528 aa21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 DUOXA2Q1HG44 320 aa21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 OTOP2Q7RTS6 562 aa21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 GAS2L3Q86XJ1 694 aa21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 RDH13Q8NBN7 331 aa21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 URGCPQ8TCY9 931 aa21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 FAXDC2Q96IV6 333 aa21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 PPP1R10Q96QC0 940 aaKnown RBP21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 RPS6KC1Q96S38 1066 aa21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 RC3H2Q9HBD1 1191 aaKnown RBP21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 COQ4Q9Y3A0 265 aa21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 SLC4A7Q9Y6M7 1214 aa21.39■■□□□ 1.01
SCAMP3-209ENST00000497470 MEFVO15553 781 aaPredicted RBP21.38■■□□□ 1.01
SCAMP3-209ENST00000497470 CDK11BP21127 795 aaKnown RBP21.38■■□□□ 1.01
SCAMP3-209ENST00000497470 AKAP5P24588 427 aa21.38■■□□□ 1.01
SCAMP3-209ENST00000497470 OSTNP61366 133 aa21.38■■□□□ 1.01
SCAMP3-209ENST00000497470 HTRA4P83105 476 aaPredicted RBP21.38■■□□□ 1.01
SCAMP3-209ENST00000497470 NOMO2Q5JPE7 1267 aa21.38■■□□□ 1.01
SCAMP3-209ENST00000497470 C15orf39Q6ZRI6 1047 aa21.38■■□□□ 1.01
SCAMP3-209ENST00000497470 CMTR2Q8IYT2 770 aaKnown RBP21.38■■□□□ 1.01
SCAMP3-209ENST00000497470 ABI1Q8IZP0 508 aa21.38■■□□□ 1.01
SCAMP3-209ENST00000497470 UROC1Q96N76 676 aa21.38■■□□□ 1.01
SCAMP3-209ENST00000497470 GAD1Q99259 594 aa21.38■■□□□ 1.01
SCAMP3-209ENST00000497470 TUBGCP2Q9BSJ2 902 aa21.38■■□□□ 1.01
SCAMP3-209ENST00000497470 PDE11AQ9HCR9 933 aa21.38■■□□□ 1.01
SCAMP3-209ENST00000497470 PTGESO14684 152 aa21.37■■□□□ 1.01
SCAMP3-209ENST00000497470 GJB5O95377 273 aa21.37■■□□□ 1.01
SCAMP3-209ENST00000497470 LRPAP1P30533 357 aa21.37■■□□□ 1.01
SCAMP3-209ENST00000497470 RPL9P32969 192 aaKnown RBP21.37■■□□□ 1.01
SCAMP3-209ENST00000497470 MLLT1Q03111 559 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms