RNA–Protein interactions for RNA: ENST00000497399.1

TCTN3-206, Transcript of tectonic family member 3, humanhuman

TSL 5

Gene TCTN3, Length 800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-206ENST00000497399 KIAA1586Q9HCI6 787 aa10.68□□□□□ -0.7
TCTN3-206ENST00000497399 CHD7Q9P2D1 2997 aa10.68□□□□□ -0.7
TCTN3-206ENST00000497399 LRRIQ3A6PVS8 624 aaPredicted RBP10.67□□□□□ -0.7
TCTN3-206ENST00000497399 LGALS16A8MUM7 142 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 CBFA2T2O43439 604 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 TIMP1P01033 207 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 TRIM49P0CI25 452 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 TRIM49CP0CI26 452 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 STAG3L1P0CL83 205 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 PBX1P40424 430 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 GRM5P41594 1212 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 VAMP7P51809 220 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 OSTNP61366 133 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 PPP2R3AQ06190 1150 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 ENPEPQ07075 957 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 PPP3CAQ08209 521 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 NCBP1Q09161 790 aaKnown RBP10.67□□□□□ -0.7
TCTN3-206ENST00000497399 KCNH2Q12809 1159 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 PAK2Q13177 524 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 PSMD6Q15008 389 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 ENOX2Q16206 610 aaKnown RBP10.67□□□□□ -0.7
TCTN3-206ENST00000497399 DCAF4L1Q3SXM0 396 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 TMEM240Q5SV17 173 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 SMG8Q8ND04 991 aaKnown RBP10.67□□□□□ -0.7
TCTN3-206ENST00000497399 TMC2Q8TDI7 906 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 SCLYQ96I15 445 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 ADPGKQ9BRR6 497 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 PPP1R12CQ9BZL4 782 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 NDST4Q9H3R1 872 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 HIPK3Q9H422 1215 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 PDE11AQ9HCR9 933 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 CHST12Q9NRB3 414 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 TMEM39AQ9NV64 488 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 RBAKQ9NYW8 714 aaPredicted RBP10.67□□□□□ -0.7
TCTN3-206ENST00000497399 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.67□□□□□ -0.7
TCTN3-206ENST00000497399 MICAL3Q7RTP6 2002 aa10.67□□□□□ -0.7
TCTN3-206ENST00000497399 PTPRJQ12913 1337 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 TMEM265A0A087WTH1 108 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 GRXCR1A8MXD5 290 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 AFPP02771 609 aaKnown RBP10.66□□□□□ -0.7
TCTN3-206ENST00000497399 CXCL10P02778 98 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 CLTAP09496 248 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 KRT13P13646 458 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 RAG1P15918 1043 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 CYP2C18P33260 490 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 PBX2P40425 430 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 CCL23P55773 120 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 CLDN10P78369 228 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 TCTN1Q2MV58 587 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 SLC10A6Q3KNW5 377 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 FILIP1LQ4L180 1135 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 DCAF17Q5H9S7 520 aaPredicted RBP10.66□□□□□ -0.7
TCTN3-206ENST00000497399 TCERG1LQ5VWI1 586 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 MFSD5Q6N075 450 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 RTN4RL1Q86UN2 441 aaPredicted RBP10.66□□□□□ -0.7
TCTN3-206ENST00000497399 LINC01599Q8WXQ3 324 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 ZNF516Q92618 1163 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 CCDC127Q96BQ5 260 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 PDLIM2Q96JY6 352 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 FAM84AQ96KN4 292 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 RNPC3Q96LT9 517 aaKnown RBP10.66□□□□□ -0.7
TCTN3-206ENST00000497399 POP1Q99575 1024 aaKnown RBP10.66□□□□□ -0.7
TCTN3-206ENST00000497399 TRAIPQ9BWF2 469 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 CXCL16Q9H2A7 254 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 RNF39Q9H2S5 420 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 NXF3Q9H4D5 531 aaKnown RBP10.66□□□□□ -0.7
TCTN3-206ENST00000497399 TOPORSQ9NS56 1045 aaPredicted RBP10.66□□□□□ -0.7
TCTN3-206ENST00000497399 SNTG2Q9NY99 539 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 HES2Q9Y543 173 aa10.66□□□□□ -0.7
TCTN3-206ENST00000497399 XIRP2A4UGR9 3374 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 TTC26A0AVF1 554 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 CXCL8P10145 99 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 CDC25BP30305 580 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 GCLMP48507 274 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 FMO5P49326 533 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 POU5F1Q01860 360 aaKnown RBP10.65□□□□□ -0.7
TCTN3-206ENST00000497399 UBXN1Q04323 297 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 FPGSQ05932 587 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 KCNMA1Q12791 1236 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 HSP90AA2PQ14568 343 aaPredicted RBP10.65□□□□□ -0.7
TCTN3-206ENST00000497399 KYAT1Q16773 422 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 CBWD6Q4V339 395 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 PLEKHG4Q58EX7 1191 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 CBWD3Q5JTY5 395 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 CBWD5Q5RIA9 395 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 LMBRD2Q68DH5 695 aaPredicted RBP10.65□□□□□ -0.7
TCTN3-206ENST00000497399 TWF2Q6IBS0 349 aaKnown RBP10.65□□□□□ -0.7
TCTN3-206ENST00000497399 C15orf39Q6ZRI6 1047 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 APBB1IPQ7Z5R6 666 aaPredicted RBP10.65□□□□□ -0.7
TCTN3-206ENST00000497399 MRPL10Q7Z7H8 261 aaKnown RBP10.65□□□□□ -0.7
TCTN3-206ENST00000497399 VSTM4Q8IW00 320 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 DBF4BQ8NFT6 615 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 ERGIC2Q96RQ1 377 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 CGRRF1Q99675 332 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 IFIH1Q9BYX4 1025 aaKnown RBP10.65□□□□□ -0.7
TCTN3-206ENST00000497399 TMEM117Q9H0C3 514 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 RPF1Q9H9Y2 349 aaKnown RBP10.65□□□□□ -0.7
TCTN3-206ENST00000497399 PRDM6Q9NQX0 595 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 FAM105AQ9NUU6 356 aa10.65□□□□□ -0.7
TCTN3-206ENST00000497399 IPPQ9Y573 584 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms