RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 C22orf23Q9BZE7 217 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 UNKQ9C0B0 810 aaKnown RBP2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 TTYH1Q9H313 450 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 UNC45AQ9H3U1 944 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 MS4A5Q9H3V2 200 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 PCIF1Q9H4Z3 704 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 AKTIPQ9H8T0 292 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 ATP6V0A4Q9HBG4 840 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 ARFGAP3Q9NP61 516 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 TOMM22Q9NS69 142 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 THEGQ9P2T0 379 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 FAM50BQ9Y247 325 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 ASB1Q9Y576 335 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 NUB1Q9Y5A7 615 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 EP300Q09472 2414 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 MYO15AQ9UKN7 3530 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 CFAP46Q8IYW2 2715 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 PIEZO2Q9H5I5 2752 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 LAMB2P55268 1798 aa2.95□□□□□ -1.94
CKS1BP2-201ENST00000497342 TRIOO75962 3097 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 TCF20Q9UGU0 1960 aaKnown RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 A0A087WV62 115 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 A0A1W2PPC4 97 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 F5H0A9 414 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 F5H423 210 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 PI4K2BG5E9Z4 385 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 GOLGA6L22H0YM25 854 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 LCE2BO14633 110 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 GNB5O14775 395 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 ADAMTS3O15072 1205 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 NKRFO15226 690 aaKnown RBP eCLIP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 NCAM2O15394 837 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 PPP1R11O60927 126 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 ALDH2P05091 517 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 TSHRP16473 764 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 HTR1BP28222 390 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 PIK3CBP42338 1070 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 PRIM2P49643 509 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 OXCT1P55809 520 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 NKX6-1P78426 367 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 ALDH6A1Q02252 535 aaKnown RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 NRG1Q02297 640 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 ZNF543Q08ER8 600 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 MGAT2Q10469 447 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 MALLQ13021 153 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 DDX10Q13206 875 aaKnown RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 BIRC3Q13489 604 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 UGT8Q16880 541 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 NKPD1Q17RQ9 610 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 KIAA0753Q2KHM9 967 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 SLC9C1Q4G0N8 1177 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 TOR2AQ5JU69 321 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 ZBTB41Q5SVQ8 909 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 HLA-DQA1Q5Y7H0 255 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 TANGO2Q6ICL3 276 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 TMEM132EQ6IEE7 984 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 PPP4R3AQ6IN85 833 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 MZT2BQ6NZ67 158 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 APOA5Q6Q788 366 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 C1orf122Q6ZSJ8 110 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 CCDC149Q6ZUS6 474 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 SYDE1Q6ZW31 735 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 KCTD1Q719H9 257 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 KRT77Q7Z794 578 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 ARHGEF25Q86VW2 580 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 COLGALT2Q8IYK4 626 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 CACNA2D3Q8IZS8 1091 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 GIMAP8Q8ND71 665 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 PPP1R14CQ8TAE6 165 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 CYP2W1Q8TAV3 490 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 PARD3BQ8TEW8 1205 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 ZNF384Q8TF68 577 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 FBLIM1Q8WUP2 373 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 HOXB13Q92826 284 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 FAM167AQ96KS9 214 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 UBL7Q96S82 380 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 CDC5LQ99459 802 aaKnown RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 G6PC3Q9BUM1 346 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 SSBP4Q9BWG4 385 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 ZHX3Q9H4I2 956 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 GBA2Q9HCG7 927 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 TMEM8AQ9HCN3 771 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 SEMA3GQ9NS98 782 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 CLDND1Q9NY35 253 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 GPRC5BQ9NZH0 403 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 TNFRSF10DQ9UBN6 386 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 KCNG1Q9UIX4 513 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 MSRAQ9UJ68 235 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 DSEQ9UL01 958 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 TCFL5Q9UL49 500 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 TPX2Q9ULW0 747 aaKnown RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 DAGLAQ9Y4D2 1042 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 PCDHGB3Q9Y5G1 929 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 SNX11Q9Y5W9 270 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 ATP23Q9Y6H3 246 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 POLR3AO14802 1390 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 KALRNO60229 2985 aa2.94□□□□□ -1.94
CKS1BP2-201ENST00000497342 VPS13AQ96RL7 3174 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 PPLO60437 1756 aa2.93□□□□□ -1.94
CKS1BP2-201ENST00000497342 E9PCH4 1651 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms