RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 COL1A1P02452 1464 aaPredicted RBP6.36□□□□□ -1.39
GGPS1-208ENST00000497327 C10orf71Q711Q0 1435 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 XDHP47989 1333 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 CCDC171Q6TFL3 1326 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 FAM47E-STBD1D6RA91 191 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 FBXO21O94952 628 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 SLPIP03973 132 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 ZFYP08048 801 aaPredicted RBP6.36□□□□□ -1.39
GGPS1-208ENST00000497327 ALDH1B1P30837 517 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 ADD2P35612 726 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 ANAPC15P60006 121 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 IFRD2Q12894 506 aaPredicted RBP6.36□□□□□ -1.39
GGPS1-208ENST00000497327 NECTIN1Q15223 517 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 TTF1Q15361 905 aaPredicted RBP6.36□□□□□ -1.39
GGPS1-208ENST00000497327 UBE3CQ15386 1083 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 MCMDC2Q4G0Z9 681 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 CAVIN4Q5BKX8 364 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 C2CD5Q86YS7 1000 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 TDRD7Q8NHU6 1098 aaKnown RBP6.36□□□□□ -1.39
GGPS1-208ENST00000497327 GNRHR2Q96P88 292 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 SEC62Q99442 399 aaKnown RBP6.36□□□□□ -1.39
GGPS1-208ENST00000497327 POLLQ9UGP5 575 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 NUB1Q9Y5A7 615 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 TAF1P21675 1872 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 SPEF2Q9C093 1822 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 ARAP2Q8WZ64 1704 aa6.36□□□□□ -1.39
GGPS1-208ENST00000497327 SNED1Q8TER0 1413 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 AKAP11Q9UKA4 1901 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 ANKRD31Q8N7Z5 1873 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 MAST3O60307 1309 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 FOXP2O15409 715 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 FOXS1O43638 330 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 IGSF3O75054 1194 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 ZNF888P0CJ79 500 aaPredicted RBP6.35□□□□□ -1.39
GGPS1-208ENST00000497327 PDE6AP16499 860 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 KCNA3P22001 575 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 HIBADHP31937 336 aaKnown RBP6.35□□□□□ -1.39
GGPS1-208ENST00000497327 SPDYAQ5MJ70 313 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 TCTN3Q6NUS6 607 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 LRRC47Q8N1G4 583 aaKnown RBP6.35□□□□□ -1.39
GGPS1-208ENST00000497327 TBC1D16Q8TBP0 767 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 APPBP2Q92624 585 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 SNX21Q969T3 373 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 ZNF669Q96BR6 464 aaPredicted RBP6.35□□□□□ -1.39
GGPS1-208ENST00000497327 TACO1Q9BSH4 297 aaKnown RBP6.35□□□□□ -1.39
GGPS1-208ENST00000497327 VPS11Q9H270 941 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 GNL3LQ9NVN8 582 aaKnown RBP6.35□□□□□ -1.39
GGPS1-208ENST00000497327 MSRB2Q9Y3D2 182 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 TCAF1Q9Y4C2 921 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 TESMINQ9Y4I5 508 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 TRAF6Q9Y4K3 522 aa6.35□□□□□ -1.39
GGPS1-208ENST00000497327 SALL1Q9NSC2 1324 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 H0Y858 1186 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 H0YIN7 160 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 M0R2C6 588 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 MUSKO15146 869 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 ADCY3O60266 1144 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 IL1R1P14778 569 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 CHRNA5P30532 468 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 KCNJ4P48050 445 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 RABEP1Q15276 862 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 SLC9C2Q5TAH2 1124 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 ZSCAN25Q6NSZ9 544 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 OLFM4Q6UX06 510 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 CCDC129Q6ZRS4 1044 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 ZNF384Q8TF68 577 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 GPR101Q96P66 508 aaPredicted RBP6.34□□□□□ -1.39
GGPS1-208ENST00000497327 RTFDC1Q9BY42 306 aaPredicted RBP6.34□□□□□ -1.39
GGPS1-208ENST00000497327 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.34□□□□□ -1.39
GGPS1-208ENST00000497327 MTFR1LQ9H019 292 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 PUS7LQ9H0K6 701 aaKnown RBP6.34□□□□□ -1.39
GGPS1-208ENST00000497327 SLC39A2Q9NP94 309 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 DENND2AQ9ULE3 1009 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 RBM8AQ9Y5S9 174 aaKnown RBP6.34□□□□□ -1.39
GGPS1-208ENST00000497327 SNX14Q9Y5W7 946 aa6.34□□□□□ -1.39
GGPS1-208ENST00000497327 A0A1B0GUL6 1792 aa6.34□□□□□ -1.4
GGPS1-208ENST00000497327 CASZ1Q86V15 1759 aa6.34□□□□□ -1.4
GGPS1-208ENST00000497327 LTBP1Q14766 1721 aa6.33□□□□□ -1.4
GGPS1-208ENST00000497327 ZNF532Q9HCE3 1301 aa6.33□□□□□ -1.4
GGPS1-208ENST00000497327 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.33□□□□□ -1.4
GGPS1-208ENST00000497327 FAM90A27PA6NNH2 459 aa6.33□□□□□ -1.4
GGPS1-208ENST00000497327 WNT9AO14904 365 aa6.33□□□□□ -1.4
GGPS1-208ENST00000497327 UFL1O94874 794 aa6.33□□□□□ -1.4
GGPS1-208ENST00000497327 AMHP03971 560 aa6.33□□□□□ -1.4
GGPS1-208ENST00000497327 HSPD1P10809 573 aaKnown RBP6.33□□□□□ -1.4
GGPS1-208ENST00000497327 DBPQ10586 325 aaPredicted RBP6.33□□□□□ -1.4
GGPS1-208ENST00000497327 MAP3K12Q12852 859 aa6.33□□□□□ -1.4
GGPS1-208ENST00000497327 VPS53Q5VIR6 699 aa6.33□□□□□ -1.4
GGPS1-208ENST00000497327 CREB3L3Q68CJ9 461 aa6.33□□□□□ -1.4
GGPS1-208ENST00000497327 TMED8Q6PL24 325 aaPredicted RBP6.33□□□□□ -1.4
GGPS1-208ENST00000497327 SPATC1Q76KD6 591 aa6.33□□□□□ -1.4
GGPS1-208ENST00000497327 ZNF622Q969S3 477 aaKnown RBP eCLIP6.33□□□□□ -1.4
GGPS1-208ENST00000497327 LMF1Q96S06 567 aa6.33□□□□□ -1.4
GGPS1-208ENST00000497327 STRBPQ96SI9 672 aaKnown RBP6.33□□□□□ -1.4
GGPS1-208ENST00000497327 SPATA9Q9BWV2 254 aa6.33□□□□□ -1.4
GGPS1-208ENST00000497327 SEMA4AQ9H3S1 761 aa6.33□□□□□ -1.4
GGPS1-208ENST00000497327 CD209Q9NNX6 404 aa6.33□□□□□ -1.4
GGPS1-208ENST00000497327 LRRC37AA6NMS7 1700 aa6.33□□□□□ -1.4
GGPS1-208ENST00000497327 DUOX1Q9NRD9 1551 aa6.32□□□□□ -1.4
GGPS1-208ENST00000497327 FAM205AQ6ZU69 1335 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms