RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 ELF2Q15723 593 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 CCDC96Q2M329 555 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 ATP13A4Q4VNC1 1196 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 PHF19Q5T6S3 580 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 KANK2Q63ZY3 851 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 PPP4R3AQ6IN85 833 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 MZT2AQ6P582 158 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 LRSAM1Q6UWE0 723 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 Q7L0L9 218 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 TTC30BQ8N4P2 665 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 IGDCC4Q8TDY8 1250 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 ZCCHC14Q8WYQ9 949 aaKnown RBP4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 SLC5A5Q92911 643 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 TTC17Q96AE7 1141 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 GBP4Q96PP9 640 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 TMEM209Q96SK2 561 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 MENTQ9BUN1 341 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 C1QTNF1Q9BXJ1 281 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 RSPH9Q9H1X1 276 aaPredicted RBP4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 MTMR10Q9NXD2 777 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 PGAP2Q9UHJ9 254 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 EVLQ9UI08 416 aaPredicted RBP4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 FBXO2Q9UK22 296 aaPredicted RBP4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 SLC45A1Q9Y2W3 748 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 GIT1Q9Y2X7 761 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 RABGAP1Q9Y3P9 1069 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 KCTD3Q9Y597 815 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 IRAK3Q9Y616 596 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 NRXN3Q9Y4C0 1643 aa4.39□□□□□ -1.71
EXOSC3-208ENST00000496910 THSD7AQ9UPZ6 1657 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 PKD1L3Q7Z443 1732 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 MLH3Q9UHC1 1453 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 SH3D21A4FU49 640 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 SNX2O60749 519 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 MAFO75444 373 aaPredicted RBP4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 ENO2P09104 434 aaPredicted RBP4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 RBP3P10745 1247 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 ZNF28P17035 718 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 AK2P54819 239 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 MLLT6P55198 1093 aaPredicted RBP4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 IL13RA1P78552 427 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 ALDH6A1Q02252 535 aaKnown RBP4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 ADCY1Q08828 1119 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 SMAD4Q13485 552 aaKnown RBP4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 MYBPC3Q14896 1274 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 ZNF124Q15973 351 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 KCNA10Q16322 511 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 DEFB115Q30KQ5 88 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 DACT2Q5SW24 774 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 BROXQ5VW32 411 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 ZKSCAN2Q63HK3 967 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 VASNQ6EMK4 673 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 B3GNT9Q6UX72 402 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 LDHAL6AQ6ZMR3 332 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 GET4Q7L5D6 327 aaPredicted RBP4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 KANSL1Q7Z3B3 1105 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 KRT28Q7Z3Y7 464 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 KRTAP19-1Q8IUB9 90 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 CREBRFQ8IUR6 639 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 FAM186BQ8IYM0 893 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 CMTR2Q8IYT2 770 aaKnown RBP4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 ZNF610Q8N9Z0 462 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 RTF1Q92541 710 aaKnown RBP4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 ZNF496Q96IT1 587 aaPredicted RBP4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 TNIP3Q96KP6 325 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 ZSWIM3Q96MP5 696 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 AIFM3Q96NN9 605 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 SERINC2Q96SA4 455 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 FOXB1Q99853 325 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 EIF2AK1Q9BQI3 630 aaKnown RBP4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 LRRC27Q9C0I9 530 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 IFT122Q9HBG6 1241 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 PCDH18Q9HCL0 1135 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 INCENPQ9NQS7 918 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 TOMM22Q9NS69 142 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 DNM3Q9UQ16 869 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 PTPN22Q9Y2R2 807 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 CTDP1Q9Y5B0 961 aaPredicted RBP4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 PMF1-BGLAPU3KQ54 211 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 PTPN13Q12923 2485 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 PLCH1Q4KWH8 1693 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 TOPAZ1Q8N9V7 1692 aa4.38□□□□□ -1.71
EXOSC3-208ENST00000496910 DOPEY1Q5JWR5 2465 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 USP34Q70CQ2 3546 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 THSD7BQ9C0I4 1608 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 PRAMEF22A3QJZ6 481 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 TCAF2A6NFQ2 919 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 NPIPB6E9PJ23 425 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 ELL2O00472 640 aaPredicted RBP4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 KNG1P01042 644 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 CCND1P24385 295 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 RECQLP46063 649 aaPredicted RBP4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 OCRLQ01968 901 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 DDX10Q13206 875 aaKnown RBP4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 TRIM14Q14142 442 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 PDCD1Q15116 288 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 ZNF174Q15697 407 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 ALDH1L2Q3SY69 923 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 ZBTB41Q5SVQ8 909 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 PRAMEF18Q5VWM3 479 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms