RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 SNX27Q96L92 541 aa23.64■■□□□ 1.37
C9orf3-222ENST00000496567 MFSD14AQ96MC6 490 aa23.64■■□□□ 1.37
C9orf3-222ENST00000496567 RPS6KC1Q96S38 1066 aa23.64■■□□□ 1.37
C9orf3-222ENST00000496567 THAP9Q9H5L6 903 aa23.64■■□□□ 1.37
C9orf3-222ENST00000496567 ASB7Q9H672 318 aa23.64■■□□□ 1.37
C9orf3-222ENST00000496567 KLK14Q9P0G3 267 aa23.64■■□□□ 1.37
C9orf3-222ENST00000496567 TTC26A0AVF1 554 aa23.63■■□□□ 1.37
C9orf3-222ENST00000496567 ARL5CA6NH57 179 aa23.63■■□□□ 1.37
C9orf3-222ENST00000496567 BECN2A8MW95 431 aa23.63■■□□□ 1.37
C9orf3-222ENST00000496567 OFD1O75665 1012 aa23.63■■□□□ 1.37
C9orf3-222ENST00000496567 FGFR1P11362 822 aa23.63■■□□□ 1.37
C9orf3-222ENST00000496567 ATP2A2P16615 1042 aaKnown RBP23.63■■□□□ 1.37
C9orf3-222ENST00000496567 MLH1P40692 756 aa23.63■■□□□ 1.37
C9orf3-222ENST00000496567 ALKAL1Q6UXT8 129 aa23.63■■□□□ 1.37
C9orf3-222ENST00000496567 INTS8Q75QN2 995 aaKnown RBP23.63■■□□□ 1.37
C9orf3-222ENST00000496567 USP37Q86T82 979 aa23.63■■□□□ 1.37
C9orf3-222ENST00000496567 FAM114A1Q8IWE2 563 aa23.63■■□□□ 1.37
C9orf3-222ENST00000496567 HELQQ8TDG4 1101 aa23.63■■□□□ 1.37
C9orf3-222ENST00000496567 TSPAN18Q96SJ8 248 aa23.63■■□□□ 1.37
C9orf3-222ENST00000496567 GAD1Q99259 594 aa23.63■■□□□ 1.37
C9orf3-222ENST00000496567 TMEM117Q9H0C3 514 aa23.63■■□□□ 1.37
C9orf3-222ENST00000496567 METTL14Q9HCE5 456 aaKnown RBP23.63■■□□□ 1.37
C9orf3-222ENST00000496567 CNTN3Q9P232 1028 aa23.63■■□□□ 1.37
C9orf3-222ENST00000496567 CITO14578 2027 aa23.63■■□□□ 1.37
C9orf3-222ENST00000496567 LACTBL1A8MY62 500 aa23.62■■□□□ 1.37
C9orf3-222ENST00000496567 INPPL1O15357 1258 aa23.62■■□□□ 1.37
C9orf3-222ENST00000496567 DGKIO75912 1065 aa23.62■■□□□ 1.37
C9orf3-222ENST00000496567 KRT13P13646 458 aa23.62■■□□□ 1.37
C9orf3-222ENST00000496567 PSMD6Q15008 389 aa23.62■■□□□ 1.37
C9orf3-222ENST00000496567 CCDC40Q4G0X9 1142 aa23.62■■□□□ 1.37
C9orf3-222ENST00000496567 XKR4Q5GH76 650 aa23.62■■□□□ 1.37
C9orf3-222ENST00000496567 CLLU1OSQ5K130 101 aa23.62■■□□□ 1.37
C9orf3-222ENST00000496567 FAM200AQ8TCP9 573 aa23.62■■□□□ 1.37
C9orf3-222ENST00000496567 URGCPQ8TCY9 931 aa23.62■■□□□ 1.37
C9orf3-222ENST00000496567 RNF19AQ9NV58 838 aa23.62■■□□□ 1.37
C9orf3-222ENST00000496567 KANSL3Q9P2N6 904 aa23.62■■□□□ 1.37
C9orf3-222ENST00000496567 GJB5O95377 273 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 ENPEPQ07075 957 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 FRMD5Q7Z6J6 570 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 HERC6Q8IVU3 1022 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 DHX40Q8IX18 779 aaKnown RBP23.61■■□□□ 1.37
C9orf3-222ENST00000496567 ZFP42Q96MM3 310 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 FNBP1Q96RU3 617 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 ZBED2Q9BTP6 218 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 CBX8Q9HC52 389 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 ARMCX3Q9UH62 379 aaPredicted RBP23.61■■□□□ 1.37
C9orf3-222ENST00000496567 INPP5FQ9Y2H2 1132 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 TULP1O00294 542 aaPredicted RBP23.61■■□□□ 1.37
C9orf3-222ENST00000496567 KCNE1P15382 129 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 IQCB1Q15051 598 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 NOMO2Q5JPE7 1267 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 FAM117BQ6P1L5 589 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 NT5DC4Q86YG4 428 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 TMC2Q8TDI7 906 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 CASD1Q96PB1 797 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 MRPL9Q9BYD2 267 aaKnown RBP23.61■■□□□ 1.37
C9orf3-222ENST00000496567 PDE11AQ9HCR9 933 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 MAGEC2Q9UBF1 373 aaPredicted RBP23.61■■□□□ 1.37
C9orf3-222ENST00000496567 DERAQ9Y315 318 aa23.61■■□□□ 1.37
C9orf3-222ENST00000496567 RALGAPA2Q2PPJ7 1873 aa23.6■■□□□ 1.37
C9orf3-222ENST00000496567 MEFVO15553 781 aaPredicted RBP23.6■■□□□ 1.37
C9orf3-222ENST00000496567 MARSP56192 900 aaKnown RBP23.6■■□□□ 1.37
C9orf3-222ENST00000496567 BFSP1Q12934 665 aa23.6■■□□□ 1.37
C9orf3-222ENST00000496567 NCAPHQ15003 741 aa23.6■■□□□ 1.37
C9orf3-222ENST00000496567 TMCO2Q7Z6W1 182 aaPredicted RBP23.6■■□□□ 1.37
C9orf3-222ENST00000496567 PARD3BQ8TEW8 1205 aa23.6■■□□□ 1.37
C9orf3-222ENST00000496567 CCDC127Q96BQ5 260 aa23.6■■□□□ 1.37
C9orf3-222ENST00000496567 ZNF689Q96CS4 500 aaPredicted RBP23.6■■□□□ 1.37
C9orf3-222ENST00000496567 BORCS6Q96GS4 357 aa23.6■■□□□ 1.37
C9orf3-222ENST00000496567 YME1L1Q96TA2 773 aa23.6■■□□□ 1.37
C9orf3-222ENST00000496567 FANCLQ9NW38 375 aa23.6■■□□□ 1.37
C9orf3-222ENST00000496567 C2CD2Q9Y426 696 aa23.6■■□□□ 1.37
C9orf3-222ENST00000496567 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.6■■□□□ 1.37
C9orf3-222ENST00000496567 SMIM28A0A1B0GU29 152 aa23.59■■□□□ 1.37
C9orf3-222ENST00000496567 TBKBP1A7MCY6 615 aa23.59■■□□□ 1.37
C9orf3-222ENST00000496567 THP07101 528 aa23.59■■□□□ 1.37
C9orf3-222ENST00000496567 SCNN1GP51170 649 aa23.59■■□□□ 1.37
C9orf3-222ENST00000496567 VAMP7P51809 220 aa23.59■■□□□ 1.37
C9orf3-222ENST00000496567 GRIK3Q13003 919 aa23.59■■□□□ 1.37
C9orf3-222ENST00000496567 TDHQ8IZJ6 230 aa23.59■■□□□ 1.37
C9orf3-222ENST00000496567 GSTCDQ8NEC7 633 aa23.59■■□□□ 1.37
C9orf3-222ENST00000496567 KIF12Q96FN5 646 aa23.59■■□□□ 1.37
C9orf3-222ENST00000496567 CNOT6LQ96LI5 555 aaKnown RBP23.59■■□□□ 1.37
C9orf3-222ENST00000496567 SAMSN1Q9NSI8 373 aaKnown RBP23.59■■□□□ 1.37
C9orf3-222ENST00000496567 INSL6Q9Y581 213 aa23.59■■□□□ 1.37
C9orf3-222ENST00000496567 PTPRSQ13332 1948 aa23.59■■□□□ 1.37
C9orf3-222ENST00000496567 PTGESO14684 152 aa23.58■■□□□ 1.37
C9orf3-222ENST00000496567 XPOTO43592 962 aaKnown RBP23.58■■□□□ 1.37
C9orf3-222ENST00000496567 DLATP10515 647 aaKnown RBP23.58■■□□□ 1.37
C9orf3-222ENST00000496567 TPM4P67936 248 aa23.58■■□□□ 1.37
C9orf3-222ENST00000496567 HTRA4P83105 476 aaPredicted RBP23.58■■□□□ 1.37
C9orf3-222ENST00000496567 TMEM132DQ14C87 1099 aa23.58■■□□□ 1.37
C9orf3-222ENST00000496567 IRF2BP1Q8IU81 584 aa23.58■■□□□ 1.37
C9orf3-222ENST00000496567 CREBRFQ8IUR6 639 aa23.58■■□□□ 1.37
C9orf3-222ENST00000496567 WDR49Q8IV35 697 aa23.58■■□□□ 1.37
C9orf3-222ENST00000496567 RAD9AQ99638 391 aa23.58■■□□□ 1.37
C9orf3-222ENST00000496567 CGRRF1Q99675 332 aa23.58■■□□□ 1.37
C9orf3-222ENST00000496567 RC3H2Q9HBD1 1191 aaKnown RBP23.58■■□□□ 1.37
C9orf3-222ENST00000496567 SLC38A7Q9NVC3 462 aa23.58■■□□□ 1.37
C9orf3-222ENST00000496567 GOLGA6L19H0YKK7 550 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms