RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 BIRC3Q13489 604 aa16.46■□□□□ 0.23
CALD1-222ENST00000495522 EMC2Q15006 297 aa16.46■□□□□ 0.23
CALD1-222ENST00000495522 CLEC16AQ2KHT3 1053 aa16.46■□□□□ 0.23
CALD1-222ENST00000495522 SPDYCQ5MJ68 293 aa16.46■□□□□ 0.23
CALD1-222ENST00000495522 ACAD10Q6JQN1 1059 aa16.46■□□□□ 0.23
CALD1-222ENST00000495522 EFCAB13Q8IY85 973 aa16.46■□□□□ 0.23
CALD1-222ENST00000495522 GLG1Q92896 1179 aa16.46■□□□□ 0.23
CALD1-222ENST00000495522 KLRG1Q96E93 195 aa16.46■□□□□ 0.23
CALD1-222ENST00000495522 MYPNQ86TC9 1320 aa16.46■□□□□ 0.23
CALD1-222ENST00000495522 PPFIA2O75334 1257 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 POLGP54098 1239 aaPredicted RBP16.45■□□□□ 0.22
CALD1-222ENST00000495522 DRG2P55039 364 aaKnown RBP16.45■□□□□ 0.22
CALD1-222ENST00000495522 KCTD19Q17RG1 926 aaPredicted RBP16.45■□□□□ 0.22
CALD1-222ENST00000495522 C15orf39Q6ZRI6 1047 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 PRELID2Q8N945 189 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 OR2W6PQ8NHA6 318 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 CENPHQ9H3R5 247 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 PCYOX1Q9UHG3 505 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 PCDHA3Q9Y5H8 950 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 SPDYE16A6NNV3 312 aaPredicted RBP16.45■□□□□ 0.22
CALD1-222ENST00000495522 KIAA0391O15091 583 aaKnown RBP16.45■□□□□ 0.22
CALD1-222ENST00000495522 GRIN3BO60391 1043 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 SCP2P22307 547 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 STRN3Q13033 797 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 PSMD6Q15008 389 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 STXBP2Q15833 593 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 ARFGAP2Q8N6H7 521 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 MAGOHBQ96A72 148 aaKnown RBP16.45■□□□□ 0.22
CALD1-222ENST00000495522 C18orf8Q96DM3 657 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 BTBD6Q96KE9 485 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 PI4K2AQ9BTU6 479 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 ZDHHC18Q9NUE0 388 aa16.45■□□□□ 0.22
CALD1-222ENST00000495522 MYO1FO00160 1098 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 PYGMP11217 842 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 PTGIRP43119 386 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 CCT5P48643 541 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 CLDN10P78369 228 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 NOL9Q5SY16 702 aaKnown RBP16.44■□□□□ 0.22
CALD1-222ENST00000495522 KCNN1Q92952 543 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 ELMO3Q96BJ8 720 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 FNBP1Q96RU3 617 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 TXLNGYQ9BZA5 131 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 SPON1Q9HCB6 807 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 ZNFX1Q9P2E3 1918 aaKnown RBP16.44■□□□□ 0.22
CALD1-222ENST00000495522 CNOT8Q9UFF9 292 aaKnown RBP16.44■□□□□ 0.22
CALD1-222ENST00000495522 MTUS1Q9ULD2 1270 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 MYH9P35579 1960 aaKnown RBP16.44■□□□□ 0.22
CALD1-222ENST00000495522 ZNF541Q9H0D2 1346 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 PODXLO00592 558 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 OATP04181 439 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 GBP1P32455 592 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 ICAM3P32942 547 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 RWDD2BP57060 319 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 SP2Q02086 613 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 WDR44Q5JSH3 913 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 AGBL2Q5U5Z8 902 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 CYFIP1Q7L576 1253 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 SLC13A5Q86YT5 568 aaPredicted RBP16.44■□□□□ 0.22
CALD1-222ENST00000495522 DNERQ8NFT8 737 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 PSPC1Q8WXF1 523 aaKnown RBP16.44■□□□□ 0.22
CALD1-222ENST00000495522 ZNF516Q92618 1163 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 RUNDC3BQ96NL0 473 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 ZNF302Q9NR11 478 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 AFG3L2Q9Y4W6 797 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 MAFBQ9Y5Q3 323 aaPredicted RBP16.44■□□□□ 0.22
CALD1-222ENST00000495522 STYXL1Q9Y6J8 313 aa16.44■□□□□ 0.22
CALD1-222ENST00000495522 LOC285556D6RIA3 1793 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 LCTP09848 1927 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 EBAG9O00559 213 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 ZEB2O60315 1214 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 ATG7O95352 703 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 LSP1P33241 339 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 GUCY1A3Q02108 690 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 CYP1B1Q16678 543 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 SKIDA1Q1XH10 827 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 ZACNQ401N2 412 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 ZNF677Q86XU0 584 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 CHST13Q8NET6 341 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 PORCNQ9H237 461 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 AGO2Q9UKV8 859 aaKnown RBP16.43■□□□□ 0.22
CALD1-222ENST00000495522 ATP8A1Q9Y2Q0 1164 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 TNNI1P19237 187 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 ATP4AP20648 1035 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 MDH1P40925 334 aaKnown RBP16.43■□□□□ 0.22
CALD1-222ENST00000495522 EIF3BP55884 814 aaKnown RBP16.43■□□□□ 0.22
CALD1-222ENST00000495522 BPIFB4P59827 614 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 TTC27Q6P3X3 843 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 CCDC137Q6PK04 289 aaKnown RBP16.43■□□□□ 0.22
CALD1-222ENST00000495522 ZDHHC14Q8IZN3 488 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 TRPM4Q8TD43 1214 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 TMEM143Q96AN5 459 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 PLVAPQ9BX97 442 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 DHX33Q9H6R0 707 aaKnown RBP16.43■□□□□ 0.22
CALD1-222ENST00000495522 SNX24Q9Y343 169 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 PCDHB2Q9Y5E7 798 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 PPP2R3BQ9Y5P8 575 aa16.43■□□□□ 0.22
CALD1-222ENST00000495522 PIGRP01833 764 aa16.42■□□□□ 0.22
CALD1-222ENST00000495522 HLA-DRAP01903 254 aa16.42■□□□□ 0.22
CALD1-222ENST00000495522 UNGP13051 313 aaPredicted RBP16.42■□□□□ 0.22
CALD1-222ENST00000495522 HPDP32754 393 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms