RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 L1TD1Q5T7N2 865 aaKnown RBP17.4■□□□□ 0.38
LIME1-209ENST00000494776 SLFN12LQ6IEE8 588 aa17.4■□□□□ 0.38
LIME1-209ENST00000494776 RABGGTAQ92696 567 aa17.4■□□□□ 0.38
LIME1-209ENST00000494776 CXCL16Q9H2A7 254 aa17.4■□□□□ 0.38
LIME1-209ENST00000494776 TDRD15B5MCY1 1934 aaKnown RBP17.39■□□□□ 0.37
LIME1-209ENST00000494776 SMIM28A0A1B0GU29 152 aa17.39■□□□□ 0.37
LIME1-209ENST00000494776 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.39■□□□□ 0.37
LIME1-209ENST00000494776 A0A1W2PQ27 194 aa17.39■□□□□ 0.37
LIME1-209ENST00000494776 A0A1W2PQ64 194 aa17.39■□□□□ 0.37
LIME1-209ENST00000494776 A0A1W2PQD8 194 aa17.39■□□□□ 0.37
LIME1-209ENST00000494776 HIDE1A8MVS5 230 aa17.39■□□□□ 0.37
LIME1-209ENST00000494776 OGTO15294 1046 aa17.39■□□□□ 0.37
LIME1-209ENST00000494776 CLTAP09496 248 aa17.39■□□□□ 0.37
LIME1-209ENST00000494776 HSP90AA2PQ14568 343 aaPredicted RBP17.39■□□□□ 0.37
LIME1-209ENST00000494776 MRPL43Q8N983 215 aaKnown RBP17.39■□□□□ 0.37
LIME1-209ENST00000494776 SNX27Q96L92 541 aa17.39■□□□□ 0.37
LIME1-209ENST00000494776 ASB2Q96Q27 587 aa17.39■□□□□ 0.37
LIME1-209ENST00000494776 CDCA3Q99618 268 aaPredicted RBP17.39■□□□□ 0.37
LIME1-209ENST00000494776 HAPLN2Q9GZV7 340 aa17.39■□□□□ 0.37
LIME1-209ENST00000494776 ZBP1Q9H171 429 aa17.39■□□□□ 0.37
LIME1-209ENST00000494776 SLC38A7Q9NVC3 462 aa17.39■□□□□ 0.37
LIME1-209ENST00000494776 MARCH5Q9NX47 278 aa17.39■□□□□ 0.37
LIME1-209ENST00000494776 CACNG4Q9UBN1 327 aa17.39■□□□□ 0.37
LIME1-209ENST00000494776 CIZ1Q9ULV3 898 aaPredicted RBP17.39■□□□□ 0.37
LIME1-209ENST00000494776 PRUNE2Q8WUY3 3088 aa17.39■□□□□ 0.37
LIME1-209ENST00000494776 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.38■□□□□ 0.37
LIME1-209ENST00000494776 FSD2A1L4K1 749 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 ANKRD63C9JTQ0 380 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 ACTN4O43707 911 aaKnown RBP17.38■□□□□ 0.37
LIME1-209ENST00000494776 PPP1R37O75864 691 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 CTSAP10619 480 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 CASP1P29466 404 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 NDUFV1P49821 464 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 CASP5P51878 434 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 NDUFA8P51970 172 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 CUL4BQ13620 913 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 POSTNQ15063 836 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 KIAA1841Q6NSI8 718 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 CNNM4Q6P4Q7 775 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 ALKAL1Q6UXT8 129 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 UNC13DQ70J99 1090 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 GRAMD1CQ8IYS0 662 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 EFHBQ8N7U6 833 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 AUTS2Q8WXX7 1259 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 POMGNT1Q8WZA1 660 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 FAM212AQ96EL1 285 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 PAGE5Q96GU1 130 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 PPP1R10Q96QC0 940 aaKnown RBP17.38■□□□□ 0.37
LIME1-209ENST00000494776 STRA6Q9BX79 667 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 RPF1Q9H9Y2 349 aaKnown RBP17.38■□□□□ 0.37
LIME1-209ENST00000494776 MRPL17Q9NRX2 175 aaKnown RBP17.38■□□□□ 0.37
LIME1-209ENST00000494776 ADAM28Q9UKQ2 775 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 HPSEQ9Y251 543 aa17.38■□□□□ 0.37
LIME1-209ENST00000494776 A0A0B4J269 797 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 C2orf71A6NGG8 1288 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 TISP43B9A030 160 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 F8W810 466 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 H3BQ06 376 aaPredicted RBP17.37■□□□□ 0.37
LIME1-209ENST00000494776 TULP1O00294 542 aaPredicted RBP17.37■□□□□ 0.37
LIME1-209ENST00000494776 LINC01565O15544 149 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 PRPF6O94906 941 aaKnown RBP17.37■□□□□ 0.37
LIME1-209ENST00000494776 SOD2P04179 222 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 URODP06132 367 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 SRGAP2BP0DMP2 458 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 CXCL8P10145 99 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 PPP2R3AQ06190 1150 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 KCNA1Q09470 495 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 ADAM15Q13444 863 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 DUSP6Q16828 381 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 SLC10A6Q3KNW5 377 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 XKR4Q5GH76 650 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 FAM26FQ5R3K3 315 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 SLC39A4Q6P5W5 647 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 HASPINQ8TF76 798 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 HPS3Q969F9 1004 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 UROC1Q96N76 676 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 PAAF1Q9BRP4 392 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 VN1R3Q9BXE9 311 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 FGFBP2Q9BYJ0 223 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 TMEM206Q9H813 350 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 PLEKHA5Q9HAU0 1116 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 CNTN3Q9P232 1028 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 AGO2Q9UKV8 859 aaKnown RBP17.37■□□□□ 0.37
LIME1-209ENST00000494776 SSX2IPQ9Y2D8 614 aa17.37■□□□□ 0.37
LIME1-209ENST00000494776 PVALEFA0A1B0GWK0 134 aa17.36■□□□□ 0.37
LIME1-209ENST00000494776 C2CD2LO14523 706 aa17.36■□□□□ 0.37
LIME1-209ENST00000494776 KCNE1P15382 129 aa17.36■□□□□ 0.37
LIME1-209ENST00000494776 TNFSF9P41273 254 aa17.36■□□□□ 0.37
LIME1-209ENST00000494776 KCNQ1P51787 676 aa17.36■□□□□ 0.37
LIME1-209ENST00000494776 NAB2Q15742 525 aa17.36■□□□□ 0.37
LIME1-209ENST00000494776 CTC1Q2NKJ3 1217 aa17.36■□□□□ 0.37
LIME1-209ENST00000494776 LLGL2Q6P1M3 1020 aa17.36■□□□□ 0.37
LIME1-209ENST00000494776 FUT10Q6P4F1 479 aa17.36■□□□□ 0.37
LIME1-209ENST00000494776 CCDC34Q96HJ3 373 aa17.36■□□□□ 0.37
LIME1-209ENST00000494776 ZMAT2Q96NC0 199 aaKnown RBP17.36■□□□□ 0.37
LIME1-209ENST00000494776 HERC2P3Q9BVR0 1158 aa17.36■□□□□ 0.37
LIME1-209ENST00000494776 EMILIN2Q9BXX0 1053 aa17.36■□□□□ 0.37
LIME1-209ENST00000494776 IKZF4Q9H2S9 585 aa17.36■□□□□ 0.37
LIME1-209ENST00000494776 GOLGA2P5Q9HBQ8 144 aa17.36■□□□□ 0.37
LIME1-209ENST00000494776 SF3B1O75533 1304 aaKnown RBP eCLIP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms