RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 CCDC127Q96BQ5 260 aa13.13□□□□□ -0.31
BRD3-206ENST00000494743 ERGIC2Q96RQ1 377 aa13.13□□□□□ -0.31
BRD3-206ENST00000494743 PPP1R9BQ96SB3 815 aa13.13□□□□□ -0.31
BRD3-206ENST00000494743 NXF3Q9H4D5 531 aaKnown RBP13.13□□□□□ -0.31
BRD3-206ENST00000494743 SIK3Q9Y2K2 1263 aa13.13□□□□□ -0.31
BRD3-206ENST00000494743 PTPRJQ12913 1337 aa13.13□□□□□ -0.31
BRD3-206ENST00000494743 ITIH6Q6UXX5 1313 aa13.13□□□□□ -0.31
BRD3-206ENST00000494743 GTPBP10A4D1E9 387 aaKnown RBP13.12□□□□□ -0.31
BRD3-206ENST00000494743 PES1O00541 588 aaKnown RBP13.12□□□□□ -0.31
BRD3-206ENST00000494743 CXCL10P02778 98 aa13.12□□□□□ -0.31
BRD3-206ENST00000494743 GTF2H1P32780 548 aa13.12□□□□□ -0.31
BRD3-206ENST00000494743 FMO5P49326 533 aa13.12□□□□□ -0.31
BRD3-206ENST00000494743 OSTNP61366 133 aa13.12□□□□□ -0.31
BRD3-206ENST00000494743 SLC10A6Q3KNW5 377 aa13.12□□□□□ -0.31
BRD3-206ENST00000494743 PLEKHG4Q58EX7 1191 aa13.12□□□□□ -0.31
BRD3-206ENST00000494743 FKBP15Q5T1M5 1219 aa13.12□□□□□ -0.31
BRD3-206ENST00000494743 SPECC1LQ69YQ0 1117 aa13.12□□□□□ -0.31
BRD3-206ENST00000494743 TWF2Q6IBS0 349 aaKnown RBP13.12□□□□□ -0.31
BRD3-206ENST00000494743 C15orf39Q6ZRI6 1047 aa13.12□□□□□ -0.31
BRD3-206ENST00000494743 USP37Q86T82 979 aa13.12□□□□□ -0.31
BRD3-206ENST00000494743 SMG8Q8ND04 991 aaKnown RBP13.12□□□□□ -0.31
BRD3-206ENST00000494743 LINC01599Q8WXQ3 324 aa13.12□□□□□ -0.31
BRD3-206ENST00000494743 POP1Q99575 1024 aaKnown RBP13.12□□□□□ -0.31
BRD3-206ENST00000494743 CGRRF1Q99675 332 aa13.12□□□□□ -0.31
BRD3-206ENST00000494743 IFIH1Q9BYX4 1025 aaKnown RBP13.12□□□□□ -0.31
BRD3-206ENST00000494743 PDE11AQ9HCR9 933 aa13.12□□□□□ -0.31
BRD3-206ENST00000494743 TOPORSQ9NS56 1045 aaPredicted RBP13.12□□□□□ -0.31
BRD3-206ENST00000494743 IPPQ9Y573 584 aa13.12□□□□□ -0.31
BRD3-206ENST00000494743 TTC28Q96AY4 2481 aa13.12□□□□□ -0.31
BRD3-206ENST00000494743 TTC26A0AVF1 554 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 P4HA2O15460 535 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 STX10O60499 249 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 IL18RAPO95256 599 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 PARNO95453 639 aaKnown RBP13.11□□□□□ -0.31
BRD3-206ENST00000494743 DLATP10515 647 aaKnown RBP13.11□□□□□ -0.31
BRD3-206ENST00000494743 BMP8BP34820 402 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 GCLMP48507 274 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 CCDC173Q0VFZ6 552 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 KCNMA1Q12791 1236 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 SYCP1Q15431 976 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 DPY19L2P1Q6NXN4 242 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 FAM43BQ6ZT52 329 aaPredicted RBP13.11□□□□□ -0.31
BRD3-206ENST00000494743 WDR49Q8IV35 697 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 ZNF516Q92618 1163 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 VWCEQ96DN2 955 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 SNX27Q96L92 541 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 ACAP3Q96P50 834 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 FNBP1Q96RU3 617 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 CCDC94Q9BW85 323 aaPredicted RBP13.11□□□□□ -0.31
BRD3-206ENST00000494743 TRIM6Q9C030 488 aaPredicted RBP13.11□□□□□ -0.31
BRD3-206ENST00000494743 TMEM117Q9H0C3 514 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 ASB7Q9H672 318 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 RPF1Q9H9Y2 349 aaKnown RBP13.11□□□□□ -0.31
BRD3-206ENST00000494743 TMEM8AQ9HCN3 771 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 FAM105AQ9NUU6 356 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 TMEM39AQ9NV64 488 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 SNTG2Q9NY99 539 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 HES2Q9Y543 173 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 PCDHB2Q9Y5E7 798 aa13.11□□□□□ -0.31
BRD3-206ENST00000494743 TANC1Q9C0D5 1861 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 A0A0U1RQF3 1178 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 TRIM43BA6NCK2 446 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 LACTBL1A8MY62 500 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 KIAA0355O15063 1070 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 N4BP1O75113 896 aaKnown RBP13.1□□□□□ -0.31
BRD3-206ENST00000494743 ZNF623O75123 536 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 RECQL4O94761 1208 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 ZSCAN20P17040 1043 aaPredicted RBP13.1□□□□□ -0.31
BRD3-206ENST00000494743 CYP2C18P33260 490 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 KLK7P49862 253 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 MXI1P50539 228 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 CCL23P55773 120 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 MYL7Q01449 175 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 TBX2Q13207 712 aaPredicted RBP13.1□□□□□ -0.31
BRD3-206ENST00000494743 SURF1Q15526 300 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 LRIT3Q3SXY7 679 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 ZACNQ401N2 412 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 EPC2Q52LR7 807 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 XKR4Q5GH76 650 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 KRT39Q6A163 491 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 ALKAL1Q6UXT8 129 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 SV2AQ7L0J3 742 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 TMC6Q7Z403 805 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 MRPL10Q7Z7H8 261 aaKnown RBP13.1□□□□□ -0.31
BRD3-206ENST00000494743 EFCAB13Q8IY85 973 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 OR5B17Q8NGF7 314 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 TRIM43Q96BQ3 446 aaPredicted RBP13.1□□□□□ -0.31
BRD3-206ENST00000494743 SCLYQ96I15 445 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 FAM84AQ96KN4 292 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 GDF15Q99988 308 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 PPP1R12CQ9BZL4 782 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 TTYH3Q9C0H2 523 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 PLEKHA5Q9HAU0 1116 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 RGS18Q9NS28 235 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 CNTN3Q9P232 1028 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 COQ4Q9Y3A0 265 aa13.1□□□□□ -0.31
BRD3-206ENST00000494743 C4BPAP04003 597 aaKnown RBP13.09□□□□□ -0.31
BRD3-206ENST00000494743 NFICP08651 508 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 ATF7P17544 494 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms