RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 STRN3Q13033 797 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 PTK7Q13308 1070 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 MOGSQ13724 837 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 HNRNPDQ14103 355 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 DHX34Q14147 1143 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 GIT2Q14161 759 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 NONOQ15233 471 aaKnown RBP eCLIP2.91□□□□□ -1.94
MDC1-208ENST00000494654 RCN1Q15293 331 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 CLUL1Q15846 466 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 DDB1Q16531 1140 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 MTHFSDQ2M296 383 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 ASTE1Q2TB18 679 aaPredicted RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 MAP7D1Q3KQU3 841 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 WDR72Q3MJ13 1102 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 CCDC153Q494R4 210 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 C4orf17Q53FE4 359 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 TNNI3KQ59H18 835 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 RASIP1Q5U651 963 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 SNX30Q5VWJ9 437 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 RRAGBQ5VZM2 374 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 FAM91A1Q658Y4 838 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 OLFML2BQ68BL8 750 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 GRAMD4Q6IC98 578 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 ZNF280DQ6N043 979 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 PHLDB3Q6NSJ2 640 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 PDXDC1Q6P996 788 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 BORAQ6PGQ7 559 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 FOXR2Q6PJQ5 311 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 DHRS4L2Q6PKH6 230 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 APOA5Q6Q788 366 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 VSTM1Q6UX27 236 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 B3GNT6Q6ZMB0 384 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 Q6ZNX1 250 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 C4orf50Q6ZRC1 276 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 RGS9BPQ6ZS82 235 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 TMTC3Q6ZXV5 915 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 MAEAQ7L5Y9 396 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 HS2ST1Q7LGA3 356 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 CYP2U1Q7Z449 544 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 RALYLQ86SE5 291 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 ADGRG6Q86SQ4 1221 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 SGMS1Q86VZ5 419 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 LONP2Q86WA8 852 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 DDX42Q86XP3 938 aaKnown RBP eCLIP2.91□□□□□ -1.94
MDC1-208ENST00000494654 ECHDC2Q86YB7 292 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 CCNJLQ8IV13 435 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 SCUBE1Q8IWY4 988 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 PEX5LQ8IYB4 626 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 DIS3L2Q8IYB7 885 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 SMYD4Q8IYR2 804 aaPredicted RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 ZBED8Q8IZ13 594 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 ADSSL1Q8N142 457 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 ARHGAP24Q8N264 748 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 RIBC1Q8N443 379 aaPredicted RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 SPATA5Q8NB90 893 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 TTC8Q8TAM2 541 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 PLEKHO2Q8TD55 490 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 TRPC4APQ8TEL6 797 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 ZDHHC1Q8WTX9 485 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 C10orf82Q8WW14 230 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 GAB3Q8WWW8 586 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 SREK1Q8WXA9 508 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 SCG3Q8WXD2 468 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 LPIN2Q92539 896 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 TAF4BQ92750 862 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 NACC2Q96BF6 587 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 SLC7A6OSQ96CW6 309 aaPredicted RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 ERP27Q96DN0 273 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 SUCLG2Q96I99 432 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 VPS50Q96JG6 964 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 TMEM87BQ96K49 555 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 SNX27Q96L92 541 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 CNOT6LQ96LI5 555 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 ZMAT2Q96NC0 199 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 RUNDC3BQ96NL0 473 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 HNRNPABQ99729 332 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 SH3GL1Q99961 368 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 SIKE1Q9BRV8 207 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 MAK16Q9BXY0 300 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 MRPS26Q9BYN8 205 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 ROPN1BQ9BZX4 212 aaPredicted RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 UNKQ9C0B0 810 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 ZMYND12Q9H0C1 365 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 CCDC8Q9H0W5 538 aaPredicted RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 RBM38Q9H0Z9 239 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 CSRNP2Q9H175 543 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 TAOK3Q9H2K8 898 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 PABPC3Q9H361 631 aaKnown RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 CUEDC2Q9H467 287 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 AZI2Q9H6S1 392 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 ROPN1Q9HAT0 212 aaPredicted RBP2.91□□□□□ -1.94
MDC1-208ENST00000494654 MAGEF1Q9HAY2 307 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 PARVBQ9HBI1 364 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 USP29Q9HBJ7 922 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 GPAMQ9HCL2 828 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 GPR108Q9NPR9 543 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 COPRSQ9NQ92 184 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 SAR1AQ9NR31 198 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 ZDHHC18Q9NUE0 388 aa2.91□□□□□ -1.94
MDC1-208ENST00000494654 AGPAT5Q9NUQ2 364 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms