RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 CFAP61Q8NHU2 1237 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 MIPOL1Q8TD10 442 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 SNRNP27Q8WVK2 155 aaKnown RBP10.79□□□□□ -0.68
LINC00488-201ENST00000494582 ATG4AQ8WYN0 398 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 SLC35C1Q96A29 364 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 CENPKQ9BS16 269 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 C12orf65Q9H3J6 166 aaKnown RBP10.79□□□□□ -0.68
LINC00488-201ENST00000494582 SAR1AQ9NR31 198 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 ARHGEF4Q9NR80 690 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 FBXO6Q9NRD1 293 aaPredicted RBP10.79□□□□□ -0.68
LINC00488-201ENST00000494582 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.79□□□□□ -0.68
LINC00488-201ENST00000494582 COL4A1P02462 1669 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 SLIT2O94813 1529 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 POTEFA5A3E0 1075 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 TMEM221A6NGB7 291 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 C2orf71A6NGG8 1288 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 GYG2O15488 501 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 ATMINO43313 823 aaPredicted RBP10.79□□□□□ -0.68
LINC00488-201ENST00000494582 ZNF862O60290 1169 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 CCDC22O60826 627 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 POTEIP0CG38 1075 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 SOX5P35711 763 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 VPS41P49754 854 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 PABPC4Q13310 644 aaKnown RBP eCLIP10.79□□□□□ -0.68
LINC00488-201ENST00000494582 POTEEQ6S8J3 1075 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 RGS9BPQ6ZS82 235 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 TTC7BQ86TV6 843 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 TRABD2AQ86V40 505 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 DNAJC10Q8IXB1 793 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 SLC20A1Q8WUM9 679 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 DYNLL2Q96FJ2 89 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 HERPUD2Q9BSE4 406 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 SEPT11Q9NVA2 429 aaKnown RBP10.79□□□□□ -0.68
LINC00488-201ENST00000494582 SLAIN2Q9P270 581 aa10.79□□□□□ -0.68
LINC00488-201ENST00000494582 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.78□□□□□ -0.68
LINC00488-201ENST00000494582 CDH16O75309 829 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 PCP11498 1178 aaKnown RBP10.78□□□□□ -0.68
LINC00488-201ENST00000494582 ANPEPP15144 967 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 SERPINB3P29508 390 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 DRAP1Q14919 205 aaPredicted RBP10.78□□□□□ -0.68
LINC00488-201ENST00000494582 PKN2Q16513 984 aaKnown RBP10.78□□□□□ -0.68
LINC00488-201ENST00000494582 ARSHQ5FYA8 562 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 KRT79Q5XKE5 535 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 SPTY2D1Q68D10 685 aaPredicted RBP10.78□□□□□ -0.68
LINC00488-201ENST00000494582 RNF207Q6ZRF8 634 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 RAPH1Q70E73 1250 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 SLC35B4Q969S0 331 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 CLPTM1LQ96KA5 538 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 FNBP1Q96RU3 617 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 TAOK3Q9H2K8 898 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 ZHX3Q9H4I2 956 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 CHST7Q9NS84 486 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 WHRNQ9P202 907 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 ASIC3Q9UHC3 531 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 PPM1HQ9ULR3 514 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 ZMYM2Q9UBW7 1377 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 PCDH11YQ9BZA8 1340 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 A0A1W2PRG0 241 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 CLDN3O15551 220 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 ZNF189O75820 626 aaPredicted RBP10.78□□□□□ -0.68
LINC00488-201ENST00000494582 TMCC1O94876 653 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 USP17L8P0C7I0 530 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 CCDC166P0CW27 439 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 XRCC5P13010 732 aaKnown RBP10.78□□□□□ -0.68
LINC00488-201ENST00000494582 GYS1P13807 737 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 LMNB1P20700 586 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 STAT1P42224 750 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 CPA2P48052 419 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 DSG1Q02413 1049 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 CBX3Q13185 183 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 MESDQ14696 234 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 EDRF1Q3B7T1 1238 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 SPDYAQ5MJ70 313 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 FRMD5Q7Z6J6 570 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 DGKHQ86XP1 1220 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 PDCD7Q8N8D1 485 aaKnown RBP10.78□□□□□ -0.68
LINC00488-201ENST00000494582 SMC1BQ8NDV3 1235 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 ZNF75CPQ92670 426 aaPredicted RBP10.78□□□□□ -0.68
LINC00488-201ENST00000494582 CD101Q93033 1021 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 STMN2Q93045 179 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 ABTB1Q969K4 478 aaPredicted RBP10.78□□□□□ -0.68
LINC00488-201ENST00000494582 HEY2Q9UBP5 337 aa10.78□□□□□ -0.68
LINC00488-201ENST00000494582 A0A1W2PPM1 405 aa10.77□□□□□ -0.69
LINC00488-201ENST00000494582 SPDYE16A6NNV3 312 aaPredicted RBP10.77□□□□□ -0.69
LINC00488-201ENST00000494582 VILLO15195 856 aa10.77□□□□□ -0.69
LINC00488-201ENST00000494582 BUD23O43709 281 aaKnown RBP10.77□□□□□ -0.69
LINC00488-201ENST00000494582 ZBED4O75132 1171 aa10.77□□□□□ -0.69
LINC00488-201ENST00000494582 HSPA6P17066 643 aa10.77□□□□□ -0.69
LINC00488-201ENST00000494582 VARSP26640 1264 aaKnown RBP10.77□□□□□ -0.69
LINC00488-201ENST00000494582 PIK3CAP42336 1068 aa10.77□□□□□ -0.69
LINC00488-201ENST00000494582 KCNA1Q09470 495 aa10.77□□□□□ -0.69
LINC00488-201ENST00000494582 SPARCL1Q14515 664 aa10.77□□□□□ -0.69
LINC00488-201ENST00000494582 CFAP157Q5JU67 520 aa10.77□□□□□ -0.69
LINC00488-201ENST00000494582 GPBP1Q86WP2 473 aa10.77□□□□□ -0.69
LINC00488-201ENST00000494582 ANKRD35Q8N283 1001 aa10.77□□□□□ -0.69
LINC00488-201ENST00000494582 HAS1Q92839 578 aa10.77□□□□□ -0.69
LINC00488-201ENST00000494582 CYTH2Q99418 400 aa10.77□□□□□ -0.69
LINC00488-201ENST00000494582 KIAA1586Q9HCI6 787 aa10.77□□□□□ -0.69
LINC00488-201ENST00000494582 VAT1LQ9HCJ6 419 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms