RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 ATP5JP18859 108 aa9.36□□□□□ -0.91
HMGB3P14-201ENST00000494195 DDCP20711 480 aa9.36□□□□□ -0.91
HMGB3P14-201ENST00000494195 ATP8B2P98198 1209 aa9.36□□□□□ -0.91
HMGB3P14-201ENST00000494195 PIN1Q13526 163 aaPredicted RBP9.36□□□□□ -0.91
HMGB3P14-201ENST00000494195 IL10RAQ13651 578 aa9.36□□□□□ -0.91
HMGB3P14-201ENST00000494195 PPP4R3AQ6IN85 833 aa9.36□□□□□ -0.91
HMGB3P14-201ENST00000494195 OR10H5Q8NGA6 315 aa9.36□□□□□ -0.91
HMGB3P14-201ENST00000494195 NDC1Q9BTX1 674 aa9.36□□□□□ -0.91
HMGB3P14-201ENST00000494195 PARPBPQ9NWS1 579 aa9.36□□□□□ -0.91
HMGB3P14-201ENST00000494195 CEP72Q9P209 647 aa9.36□□□□□ -0.91
HMGB3P14-201ENST00000494195 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.36□□□□□ -0.91
HMGB3P14-201ENST00000494195 S100BP04271 92 aaPredicted RBP9.35□□□□□ -0.91
HMGB3P14-201ENST00000494195 VCAM1P19320 739 aa9.35□□□□□ -0.91
HMGB3P14-201ENST00000494195 TARDBPQ13148 414 aaKnown RBP eCLIP9.35□□□□□ -0.91
HMGB3P14-201ENST00000494195 TOB2Q14106 344 aaPredicted RBP9.35□□□□□ -0.91
HMGB3P14-201ENST00000494195 ATXN7L2Q5T6C5 722 aaPredicted RBP9.35□□□□□ -0.91
HMGB3P14-201ENST00000494195 RSPH3Q86UC2 560 aa9.35□□□□□ -0.91
HMGB3P14-201ENST00000494195 RNF169Q8NCN4 708 aa9.35□□□□□ -0.91
HMGB3P14-201ENST00000494195 NUP88Q99567 741 aaPredicted RBP9.35□□□□□ -0.91
HMGB3P14-201ENST00000494195 POGKQ9P215 609 aa9.35□□□□□ -0.91
HMGB3P14-201ENST00000494195 ANKRD6Q9Y2G4 727 aa9.35□□□□□ -0.91
HMGB3P14-201ENST00000494195 CFAP20Q9Y6A4 193 aaKnown RBP9.35□□□□□ -0.91
HMGB3P14-201ENST00000494195 GRXCR1A8MXD5 290 aa9.34□□□□□ -0.91
HMGB3P14-201ENST00000494195 AKAP10O43572 662 aa9.34□□□□□ -0.91
HMGB3P14-201ENST00000494195 RPLP2P05387 115 aaKnown RBP9.34□□□□□ -0.91
HMGB3P14-201ENST00000494195 DBX2Q6ZNG2 339 aa9.34□□□□□ -0.91
HMGB3P14-201ENST00000494195 SEM1Q6ZVN7 128 aa9.34□□□□□ -0.91
HMGB3P14-201ENST00000494195 DRC7Q8IY82 874 aa9.34□□□□□ -0.91
HMGB3P14-201ENST00000494195 KAT5Q92993 513 aa9.34□□□□□ -0.91
HMGB3P14-201ENST00000494195 TMX3Q96JJ7 454 aa9.34□□□□□ -0.91
HMGB3P14-201ENST00000494195 THRAP3Q9Y2W1 955 aaKnown RBP9.34□□□□□ -0.91
HMGB3P14-201ENST00000494195 MATN3O15232 486 aa9.33□□□□□ -0.92
HMGB3P14-201ENST00000494195 CT47B1P0C2W7 299 aaPredicted RBP9.33□□□□□ -0.92
HMGB3P14-201ENST00000494195 PF4V1P10720 104 aa9.33□□□□□ -0.92
HMGB3P14-201ENST00000494195 RAB27AP51159 221 aa9.33□□□□□ -0.92
HMGB3P14-201ENST00000494195 RAP2BP61225 183 aa9.33□□□□□ -0.92
HMGB3P14-201ENST00000494195 FOXE3Q13461 319 aa9.33□□□□□ -0.92
HMGB3P14-201ENST00000494195 PUM1Q14671 1186 aaKnown RBP eCLIP9.33□□□□□ -0.92
HMGB3P14-201ENST00000494195 RABL3Q5HYI8 236 aa9.33□□□□□ -0.92
HMGB3P14-201ENST00000494195 RAB24Q969Q5 203 aa9.33□□□□□ -0.92
HMGB3P14-201ENST00000494195 ZNF503Q96F45 646 aa9.33□□□□□ -0.92
HMGB3P14-201ENST00000494195 RHOBTB2Q9BYZ6 727 aa9.33□□□□□ -0.92
HMGB3P14-201ENST00000494195 SLC23A1Q9UHI7 598 aa9.33□□□□□ -0.92
HMGB3P14-201ENST00000494195 RUVBL1Q9Y265 456 aaKnown RBP9.33□□□□□ -0.92
HMGB3P14-201ENST00000494195 PNPLA7Q6ZV29 1317 aa9.32□□□□□ -0.92
HMGB3P14-201ENST00000494195 TRIM24O15164 1050 aa9.32□□□□□ -0.92
HMGB3P14-201ENST00000494195 DTNBO60941 627 aa9.32□□□□□ -0.92
HMGB3P14-201ENST00000494195 C1SP09871 688 aa9.32□□□□□ -0.92
HMGB3P14-201ENST00000494195 AKAP5P24588 427 aa9.32□□□□□ -0.92
HMGB3P14-201ENST00000494195 CTXN1P60606 82 aa9.32□□□□□ -0.92
HMGB3P14-201ENST00000494195 MIIPQ5JXC2 388 aa9.32□□□□□ -0.92
HMGB3P14-201ENST00000494195 PLXDC1Q8IUK5 500 aa9.32□□□□□ -0.92
HMGB3P14-201ENST00000494195 SYT12Q8IV01 421 aa9.32□□□□□ -0.92
HMGB3P14-201ENST00000494195 CACTINQ8WUQ7 758 aaKnown RBP9.32□□□□□ -0.92
HMGB3P14-201ENST00000494195 PLEKHG4BQ96PX9 1271 aa9.32□□□□□ -0.92
HMGB3P14-201ENST00000494195 CAMKK2Q96RR4 588 aa9.32□□□□□ -0.92
HMGB3P14-201ENST00000494195 FAM30AQ9NZY2 134 aa9.32□□□□□ -0.92
HMGB3P14-201ENST00000494195 EIF2B4Q9UI10 523 aaKnown RBP9.32□□□□□ -0.92
HMGB3P14-201ENST00000494195 SORCS3Q9UPU3 1222 aa9.32□□□□□ -0.92
HMGB3P14-201ENST00000494195 PCDHB1Q9Y5F3 818 aa9.32□□□□□ -0.92
HMGB3P14-201ENST00000494195 RECQL4O94761 1208 aa9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 POU2F2P09086 479 aa9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 ZSCAN20P17040 1043 aaPredicted RBP9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 TNFRSF1AP19438 455 aa9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 PDCP20941 246 aa9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 APOBEC3AP31941 199 aaPredicted RBP9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 RAB39AQ14964 217 aa9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 ATP2B3Q16720 1220 aa9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 TTC7BQ86TV6 843 aa9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 IFI44Q8TCB0 444 aa9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 NSUN6Q8TEA1 469 aaKnown RBP9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 MRGPRX4Q96LA9 322 aa9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 DCLRE1CQ96SD1 692 aaKnown RBP9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 MYOCQ99972 504 aa9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 RTFDC1Q9BY42 306 aaPredicted RBP9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 KRTAP9-3Q9BYQ3 159 aa9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 CDH19Q9H159 772 aa9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 ZNF180Q9UJW8 692 aa9.31□□□□□ -0.92
HMGB3P14-201ENST00000494195 LEFTY2O00292 366 aa9.3□□□□□ -0.92
HMGB3P14-201ENST00000494195 POMCP01189 267 aa9.3□□□□□ -0.92
HMGB3P14-201ENST00000494195 NHLH2Q02577 135 aa9.3□□□□□ -0.92
HMGB3P14-201ENST00000494195 ZNF529Q6P280 563 aa9.3□□□□□ -0.92
HMGB3P14-201ENST00000494195 USP45Q70EL2 814 aa9.3□□□□□ -0.92
HMGB3P14-201ENST00000494195 GGNQ86UU5 652 aa9.3□□□□□ -0.92
HMGB3P14-201ENST00000494195 PRR18Q8N4B5 295 aa9.3□□□□□ -0.92
HMGB3P14-201ENST00000494195 CPT1CQ8TCG5 803 aa9.3□□□□□ -0.92
HMGB3P14-201ENST00000494195 CLPTM1LQ96KA5 538 aa9.3□□□□□ -0.92
HMGB3P14-201ENST00000494195 C11orf54Q9H0W9 315 aaPredicted RBP9.3□□□□□ -0.92
HMGB3P14-201ENST00000494195 VPS11Q9H270 941 aa9.3□□□□□ -0.92
HMGB3P14-201ENST00000494195 CALCOCO1Q9P1Z2 691 aa9.3□□□□□ -0.92
HMGB3P14-201ENST00000494195 PNMA8BQ9ULN7 279 aaPredicted RBP9.3□□□□□ -0.92
HMGB3P14-201ENST00000494195 DRGXA6NNA5 263 aa9.29□□□□□ -0.92
HMGB3P14-201ENST00000494195 DIRC3C9JPN6 131 aa9.29□□□□□ -0.92
HMGB3P14-201ENST00000494195 PPM1GO15355 546 aaPredicted RBP9.29□□□□□ -0.92
HMGB3P14-201ENST00000494195 SCAF4O95104 1147 aaKnown RBP9.29□□□□□ -0.92
HMGB3P14-201ENST00000494195 AMHP03971 560 aa9.29□□□□□ -0.92
HMGB3P14-201ENST00000494195 DSC2Q02487 901 aa9.29□□□□□ -0.92
HMGB3P14-201ENST00000494195 CREMQ03060 361 aa9.29□□□□□ -0.92
HMGB3P14-201ENST00000494195 DACT2Q5SW24 774 aa9.29□□□□□ -0.92
HMGB3P14-201ENST00000494195 JPH3Q8WXH2 748 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms