RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 KANSL3Q9P2N6 904 aa15.83■□□□□ 0.13
BRCA1-223ENST00000494123 GBF1Q92538 1859 aa15.83■□□□□ 0.12
BRCA1-223ENST00000494123 TDRD15B5MCY1 1934 aaKnown RBP15.83■□□□□ 0.12
BRCA1-223ENST00000494123 IL18RAPO95256 599 aa15.83■□□□□ 0.12
BRCA1-223ENST00000494123 SCNN1GP51170 649 aa15.83■□□□□ 0.12
BRCA1-223ENST00000494123 HTRA4P83105 476 aaPredicted RBP15.83■□□□□ 0.12
BRCA1-223ENST00000494123 POU5F1Q01860 360 aaKnown RBP15.83■□□□□ 0.12
BRCA1-223ENST00000494123 SLC10A6Q3KNW5 377 aa15.83■□□□□ 0.12
BRCA1-223ENST00000494123 TTI2Q6NXR4 508 aa15.83■□□□□ 0.12
BRCA1-223ENST00000494123 FOXR2Q6PJQ5 311 aa15.83■□□□□ 0.12
BRCA1-223ENST00000494123 BRSK2Q8IWQ3 736 aa15.83■□□□□ 0.12
BRCA1-223ENST00000494123 CD302Q8IX05 232 aa15.83■□□□□ 0.12
BRCA1-223ENST00000494123 CMTR2Q8IYT2 770 aaKnown RBP15.83■□□□□ 0.12
BRCA1-223ENST00000494123 LRRC43Q8N309 656 aa15.83■□□□□ 0.12
BRCA1-223ENST00000494123 CSGALNACT2Q8N6G5 542 aa15.83■□□□□ 0.12
BRCA1-223ENST00000494123 ZNF689Q96CS4 500 aaPredicted RBP15.83■□□□□ 0.12
BRCA1-223ENST00000494123 FBXL18Q96ME1 805 aa15.83■□□□□ 0.12
BRCA1-223ENST00000494123 CASD1Q96PB1 797 aa15.83■□□□□ 0.12
BRCA1-223ENST00000494123 NAT10Q9H0A0 1025 aaKnown RBP15.83■□□□□ 0.12
BRCA1-223ENST00000494123 DNAJC25Q9H1X3 360 aa15.83■□□□□ 0.12
BRCA1-223ENST00000494123 TRIP11Q15643 1979 aa15.82■□□□□ 0.12
BRCA1-223ENST00000494123 FGFR1OPO95684 399 aaKnown RBP15.82■□□□□ 0.12
BRCA1-223ENST00000494123 POMCP01189 267 aa15.82■□□□□ 0.12
BRCA1-223ENST00000494123 PSMC2P35998 433 aaKnown RBP15.82■□□□□ 0.12
BRCA1-223ENST00000494123 RAB30Q15771 203 aa15.82■□□□□ 0.12
BRCA1-223ENST00000494123 ANO6Q4KMQ2 910 aa15.82■□□□□ 0.12
BRCA1-223ENST00000494123 GLRA4Q5JXX5 417 aa15.82■□□□□ 0.12
BRCA1-223ENST00000494123 SPOUT1Q5T280 376 aaKnown RBP15.82■□□□□ 0.12
BRCA1-223ENST00000494123 C11orf57Q6ZUT1 292 aaPredicted RBP15.82■□□□□ 0.12
BRCA1-223ENST00000494123 EEF2KMTQ96G04 330 aa15.82■□□□□ 0.12
BRCA1-223ENST00000494123 FAM193BQ96PV7 902 aaPredicted RBP15.82■□□□□ 0.12
BRCA1-223ENST00000494123 RC3H2Q9HBD1 1191 aaKnown RBP15.82■□□□□ 0.12
BRCA1-223ENST00000494123 CNTN3Q9P232 1028 aa15.82■□□□□ 0.12
BRCA1-223ENST00000494123 MSRAQ9UJ68 235 aa15.82■□□□□ 0.12
BRCA1-223ENST00000494123 PCDHA11Q9Y5I1 949 aa15.82■□□□□ 0.12
BRCA1-223ENST00000494123 TTC26A0AVF1 554 aa15.81■□□□□ 0.12
BRCA1-223ENST00000494123 LACTBL1A8MY62 500 aa15.81■□□□□ 0.12
BRCA1-223ENST00000494123 INPPL1O15357 1258 aa15.81■□□□□ 0.12
BRCA1-223ENST00000494123 THP07101 528 aa15.81■□□□□ 0.12
BRCA1-223ENST00000494123 ADRB2P07550 413 aa15.81■□□□□ 0.12
BRCA1-223ENST00000494123 EPB41P11171 864 aaKnown RBP15.81■□□□□ 0.12
BRCA1-223ENST00000494123 CASP4P49662 377 aa15.81■□□□□ 0.12
BRCA1-223ENST00000494123 AFF1P51825 1210 aaKnown RBP15.81■□□□□ 0.12
BRCA1-223ENST00000494123 GRIK3Q13003 919 aa15.81■□□□□ 0.12
BRCA1-223ENST00000494123 ALKAL1Q6UXT8 129 aa15.81■□□□□ 0.12
BRCA1-223ENST00000494123 FAM186BQ8IYM0 893 aa15.81■□□□□ 0.12
BRCA1-223ENST00000494123 FIBCD1Q8N539 461 aa15.81■□□□□ 0.12
BRCA1-223ENST00000494123 CEP63Q96MT8 703 aa15.81■□□□□ 0.12
BRCA1-223ENST00000494123 DUSP9Q99956 384 aaKnown RBP15.81■□□□□ 0.12
BRCA1-223ENST00000494123 ASB7Q9H672 318 aa15.81■□□□□ 0.12
BRCA1-223ENST00000494123 TBC1D13Q9NVG8 400 aa15.81■□□□□ 0.12
BRCA1-223ENST00000494123 ANK1P16157 1881 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 COL4A6Q14031 1691 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 SMIM28A0A1B0GU29 152 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 PTGESO14684 152 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 SLC16A3O15427 465 aaKnown RBP15.8■□□□□ 0.12
BRCA1-223ENST00000494123 AKAP3O75969 853 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 SPAG1Q07617 926 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 CYP24A1Q07973 514 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 SURF1Q15526 300 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 XKR4Q5GH76 650 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 USP37Q86T82 979 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 GSTCDQ8NEC7 633 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 KIF12Q96FN5 646 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 FNBP1Q96RU3 617 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 MKNK1Q9BUB5 465 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 SRRTQ9BXP5 876 aaKnown RBP15.8■□□□□ 0.12
BRCA1-223ENST00000494123 PBX4Q9BYU1 374 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 CXCL16Q9H2A7 254 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 SLC38A7Q9NVC3 462 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 MIOSQ9NXC5 875 aa15.8■□□□□ 0.12
BRCA1-223ENST00000494123 PDCD11Q14690 1871 aaKnown RBP15.8■□□□□ 0.12
BRCA1-223ENST00000494123 MAPK13O15264 365 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 MEFVO15553 781 aaPredicted RBP15.79■□□□□ 0.12
BRCA1-223ENST00000494123 XPOTO43592 962 aaKnown RBP15.79■□□□□ 0.12
BRCA1-223ENST00000494123 KRT13P13646 458 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 MYOGP15173 224 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 KCNE1P15382 129 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 PBX2P40425 430 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 TMEM132DQ14C87 1099 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 JADE1Q6IE81 842 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 LRRC55Q6ZSA7 311 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 INTS8Q75QN2 995 aaKnown RBP15.79■□□□□ 0.12
BRCA1-223ENST00000494123 ZC3H3Q8IXZ2 948 aaKnown RBP15.79■□□□□ 0.12
BRCA1-223ENST00000494123 SP7Q8TDD2 431 aaPredicted RBP15.79■□□□□ 0.12
BRCA1-223ENST00000494123 CCDC127Q96BQ5 260 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 TSPAN18Q96SJ8 248 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 FUCA2Q9BTY2 467 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 PDE11AQ9HCR9 933 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 PLAGL2Q9UPG8 496 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 LCHNA4D1U4 455 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 ZC3H11AO75152 810 aaKnown RBP eCLIP15.79■□□□□ 0.12
BRCA1-223ENST00000494123 CA3P07451 260 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 DLATP10515 647 aaKnown RBP15.79■□□□□ 0.12
BRCA1-223ENST00000494123 SMAD3P84022 425 aaKnown RBP15.79■□□□□ 0.12
BRCA1-223ENST00000494123 PSMD6Q15008 389 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 LRIT3Q3SXY7 679 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 CCDC40Q4G0X9 1142 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 FILIP1Q7Z7B0 1213 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 MFSD14AQ96MC6 490 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms