RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 MRPL11Q9Y3B7 192 aaKnown RBP6.63□□□□□ -1.35
CPSF7-213ENST00000494016 KDM3AQ9Y4C1 1321 aa6.63□□□□□ -1.35
CPSF7-213ENST00000494016 PCDHGC5Q9Y5F6 944 aa6.63□□□□□ -1.35
CPSF7-213ENST00000494016 THSD7BQ9C0I4 1608 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 ABCB11O95342 1321 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 PITPNM2Q9BZ72 1349 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 GOLGA6L9A6NEM1 432 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 RRP9O43818 475 aaKnown RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 GAS2O43903 313 aaKnown RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 CTNND1O60716 968 aaKnown RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 SLU7O95391 586 aaKnown RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 CFBP00751 764 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 SSBP05455 408 aaKnown RBP eCLIP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 ARP10275 920 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 HOXD13P35453 343 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 ZNF76P36508 570 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 ARHGAP25P42331 645 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 MTIF2P46199 727 aaKnown RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 GMPSP49915 693 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 HSD17B4P51659 736 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 RPS26P62854 115 aaKnown RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 GHRHRQ02643 423 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 LRRC63Q05C16 580 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 NBPF12Q5TAG4 269 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 MAP1SQ66K74 1059 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 NCAPH2Q6IBW4 605 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 LLGL2Q6P1M3 1020 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 B3GNT9Q6UX72 402 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 CYP26C1Q6V0L0 522 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 LRRC55Q6ZSA7 311 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 EPM2AIP1Q7L775 607 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 GPBP1Q86WP2 473 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 FAM114A1Q8IWE2 563 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 CCDC65Q8IXS2 484 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 ZC3H3Q8IXZ2 948 aaKnown RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 MYOCDQ8IZQ8 938 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 LRRN4CLQ8ND94 238 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 GPBAR1Q8TDU6 330 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 MORC4Q8TE76 937 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 SCFD1Q8WVM8 642 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 WDR24Q96S15 920 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 DNAJC7Q99615 494 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 EIF2AK1Q9BQI3 630 aaKnown RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 PLCD4Q9BRC7 762 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 NUP58Q9BVL2 599 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 KIAA1683Q9H0B3 1180 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 PDCL3Q9H2J4 239 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 KCTD10Q9H3F6 313 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 TAF1DQ9H5J8 278 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 SH2D4AQ9H788 454 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 GINM1Q9NU53 330 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 RGL1Q9NZL6 768 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 CNOT7Q9UIV1 285 aaKnown RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 ZNF112Q9UJU3 913 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 ZNF215Q9UL58 517 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 PPP1R9AQ9ULJ8 1098 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 DNM3Q9UQ16 869 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 SIK3Q9Y2K2 1263 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 RAXQ9Y2V3 346 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 LUC7L2Q9Y383 392 aaKnown RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 REXO2Q9Y3B8 237 aaKnown RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 EPN1Q9Y6I3 576 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-213ENST00000494016 TRPM7Q96QT4 1865 aa6.62□□□□□ -1.35
CPSF7-213ENST00000494016 RPTORQ8N122 1335 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 A0A1W2PQJ5 194 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 TMPRSS2O15393 492 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 EYA4O95677 639 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 FGFR1OPO95684 399 aaKnown RBP6.61□□□□□ -1.35
CPSF7-213ENST00000494016 ICAM1P05362 532 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 TPM1P09493 284 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 CCDC175P0C221 793 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 CASQ1P31415 396 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 GNG11P61952 73 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 UBXN2AP68543 259 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 PABPC4Q13310 644 aaKnown RBP eCLIP6.61□□□□□ -1.35
CPSF7-213ENST00000494016 PPP2R5CQ13362 524 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 MEA1Q16626 185 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 TBC1D10BQ4KMP7 808 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-213ENST00000494016 HERC4Q5GLZ8 1057 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-213ENST00000494016 FIGNQ5HY92 759 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 FAM26FQ5R3K3 315 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 PRPF38AQ8NAV1 312 aaKnown RBP6.61□□□□□ -1.35
CPSF7-213ENST00000494016 ACRBPQ8NEB7 543 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 ERMNQ8TAM6 284 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 ERO1AQ96HE7 468 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 DYDC2Q96IM9 177 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 MAP7D2Q96T17 732 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 MXRA8Q9BRK3 442 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 ZNF341Q9BYN7 854 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 NDST4Q9H3R1 872 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 POLD4Q9HCU8 107 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 ZFP64Q9NPA5 681 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 CRIM1Q9NZV1 1036 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 TBC1D7Q9P0N9 293 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 COL20A1Q9P218 1284 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 HACL1Q9UJ83 578 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 AP4E1Q9UPM8 1137 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 ACTL7BQ9Y614 415 aa6.61□□□□□ -1.35
CPSF7-213ENST00000494016 RBBP6Q7Z6E9 1792 aaKnown RBP6.61□□□□□ -1.35
CPSF7-213ENST00000494016 PASKQ96RG2 1323 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 191.7 ms