RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 R4GN57 208 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 FGF18O76093 207 aa11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 ADRB1P08588 477 aa11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 TCP1P17987 556 aaKnown RBP11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 HNRNPH3P31942 346 aaKnown RBP11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 PRPHP41219 470 aa11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 MTHFRP42898 656 aa11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 ZBED6P86452 979 aa11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 PDAP1Q13442 181 aaKnown RBP11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 COL9A2Q14055 689 aaPredicted RBP11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 CDC37Q16543 378 aaPredicted RBP11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 PAN2Q504Q3 1202 aaKnown RBP11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 CES5AQ6NT32 575 aa11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 DCLK2Q8N568 766 aa11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 IL31RAQ8NI17 732 aa11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 FAM76AQ8TAV0 307 aa11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 LMBR1Q8WVP7 490 aa11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 AK8Q96MA6 479 aa11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 APOL5Q9BWW9 433 aa11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 TCP11L1Q9NUJ3 509 aa11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 CDH22Q9UJ99 828 aa11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 GGA2Q9UJY4 613 aa11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 NRCAMQ92823 1304 aa11.55□□□□□ -0.56
PDLIM1-205ENST00000493949 SETXQ7Z333 2677 aaKnown RBP11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 ZFYVE26Q68DK2 2539 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 TULP1O00294 542 aaPredicted RBP11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 USO1O60763 962 aaKnown RBP11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 PPFIA3O75145 1194 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 FGFR1OPO95684 399 aaKnown RBP11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 RPN1P04843 607 aaKnown RBP11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 ARHGAP4P98171 946 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 FUT2Q10981 343 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 GPATCH4Q5T3I0 446 aaKnown RBP11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 SWT1Q5T5J6 900 aaKnown RBP11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 EMC10Q5UCC4 262 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 RRAGBQ5VZM2 374 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 LRRC31Q6UY01 552 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 FAM43BQ6ZT52 329 aaPredicted RBP11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 TMTC3Q6ZXV5 915 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 B4GALNT4Q76KP1 1039 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 VSIG10LQ86VR7 867 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 RAB11FIP4Q86YS3 637 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 C10orf67Q8IYJ2 551 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 TDRD5Q8NAT2 981 aaKnown RBP11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 SUMF1Q8NBK3 374 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 NELFBQ8WX92 580 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 CASP10Q92851 521 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 CAVIN3Q969G5 261 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 BORCS6Q96GS4 357 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 HINFPQ9BQA5 517 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 PDCD2LQ9BRP1 358 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 CCSER1Q9C0I3 900 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 AGO3Q9H9G7 860 aaKnown RBP11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 MLXIPQ9HAP2 919 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 ERVK-5Q9HDB9 667 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 AAASQ9NRG9 546 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 LIMD1Q9UGP4 676 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 DUSP12Q9UNI6 340 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 KCNJ14Q9UNX9 436 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 BOLA1Q9Y3E2 137 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 JRKLQ9Y4A0 524 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 ATP8B3O60423 1300 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 C2orf16Q68DN1 1984 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 FRYQ5TBA9 3013 aa11.54□□□□□ -0.56
PDLIM1-205ENST00000493949 CEP295Q9C0D2 2601 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 OPLAHO14841 1288 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 TACC1O75410 805 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 RHOBTB3O94955 611 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 LCA5LO95447 670 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 PARP1P09874 1014 aaKnown RBP11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 RHOXF2BP0C7M4 288 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 MYCLP12524 364 aaPredicted RBP11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 HOXB3P14651 431 aaPredicted RBP11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 RXRAP19793 462 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 KIF5BP33176 963 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 GNAQP50148 359 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 HSD17B4P51659 736 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 VAV2P52735 878 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 SKOR1P84550 965 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 PLCB3Q01970 1234 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 UBXN1Q04323 297 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 GRIN1Q05586 938 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 NR5A1Q13285 461 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 CCDC122Q5T0U0 273 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 KIAA1841Q6NSI8 718 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 RUFY4Q6ZNE9 571 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 MICALCLQ6ZW33 695 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 KIAA1328Q86T90 577 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 TADA2BQ86TJ2 420 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 RSPH3Q86UC2 560 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 DAGLBQ8NCG7 672 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 C3orf20Q8ND61 904 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 ACRBPQ8NEB7 543 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 ZNF507Q8TCN5 953 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 JAKMIP2Q96AA8 810 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 ALS2CR12Q96Q35 445 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 ERGIC2Q96RQ1 377 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 CEP89Q96ST8 783 aa11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 ZSCAN10Q96SZ4 725 aaPredicted RBP11.53□□□□□ -0.56
PDLIM1-205ENST00000493949 SH3GL2Q99962 352 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms