RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 LLGL2Q6P1M3 1020 aa24.76■■□□□ 1.55
SNIP1-203ENST00000493916 DYMQ7RTS9 669 aa24.76■■□□□ 1.55
SNIP1-203ENST00000493916 DNAJC19Q96DA6 116 aa24.76■■□□□ 1.55
SNIP1-203ENST00000493916 ACAP3Q96P50 834 aa24.76■■□□□ 1.55
SNIP1-203ENST00000493916 PAAF1Q9BRP4 392 aa24.76■■□□□ 1.55
SNIP1-203ENST00000493916 EMILIN2Q9BXX0 1053 aa24.76■■□□□ 1.55
SNIP1-203ENST00000493916 PANK2Q9BZ23 570 aa24.76■■□□□ 1.55
SNIP1-203ENST00000493916 SEL1LQ9UBV2 794 aa24.76■■□□□ 1.55
SNIP1-203ENST00000493916 SMIM28A0A1B0GU29 152 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 HNRNPDLO14979 420 aaKnown RBP24.75■■□□□ 1.55
SNIP1-203ENST00000493916 HARSP12081 509 aaKnown RBP24.75■■□□□ 1.55
SNIP1-203ENST00000493916 HOXB8P17481 243 aaPredicted RBP24.75■■□□□ 1.55
SNIP1-203ENST00000493916 NMT1P30419 496 aaKnown RBP24.75■■□□□ 1.55
SNIP1-203ENST00000493916 GLUD2P49448 558 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 LIG4P49917 911 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 OSTNP61366 133 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 DNM1Q05193 864 aaKnown RBP24.75■■□□□ 1.55
SNIP1-203ENST00000493916 E2F4Q16254 413 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 FUT10Q6P4F1 479 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 SHC4Q6S5L8 630 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 TAS1R1Q7RTX1 841 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 SFR1Q86XK3 245 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 MAP4K3Q8IVH8 894 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 GPR65Q8IYL9 337 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 PDILTQ8N807 584 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 TMEM87AQ8NBN3 555 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 CUEDC2Q9H467 287 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 CHST7Q9NS84 486 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 CNTN3Q9P232 1028 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 CACNG4Q9UBN1 327 aa24.75■■□□□ 1.55
SNIP1-203ENST00000493916 SF3B1O75533 1304 aaKnown RBP eCLIP24.75■■□□□ 1.554e-8■■■■■ 68.9
SNIP1-203ENST00000493916 KIF4AO95239 1232 aa24.74■■□□□ 1.55
SNIP1-203ENST00000493916 KCNE1P15382 129 aa24.74■■□□□ 1.55
SNIP1-203ENST00000493916 GAP43P17677 238 aa24.74■■□□□ 1.55
SNIP1-203ENST00000493916 DSG1Q02413 1049 aa24.74■■□□□ 1.55
SNIP1-203ENST00000493916 GLRA4Q5JXX5 417 aa24.74■■□□□ 1.55
SNIP1-203ENST00000493916 KIAA0319Q5VV43 1072 aa24.74■■□□□ 1.55
SNIP1-203ENST00000493916 PPFIBP1Q86W92 1011 aa24.74■■□□□ 1.55
SNIP1-203ENST00000493916 SLC22A17Q8WUG5 538 aa24.74■■□□□ 1.55
SNIP1-203ENST00000493916 RABGGTAQ92696 567 aa24.74■■□□□ 1.55
SNIP1-203ENST00000493916 UROC1Q96N76 676 aa24.74■■□□□ 1.55
SNIP1-203ENST00000493916 GPR62Q9BZJ7 368 aa24.74■■□□□ 1.55
SNIP1-203ENST00000493916 HAPLN2Q9GZV7 340 aa24.74■■□□□ 1.55
SNIP1-203ENST00000493916 TNMDQ9H2S6 317 aa24.74■■□□□ 1.55
SNIP1-203ENST00000493916 ZDHHC9Q9Y397 364 aa24.74■■□□□ 1.55
SNIP1-203ENST00000493916 FRMD3A2A2Y4 597 aa24.73■■□□□ 1.55
SNIP1-203ENST00000493916 TMEM189-UBE2V1I3L0A0 370 aa24.73■■□□□ 1.55
SNIP1-203ENST00000493916 TADA2AO75478 443 aa24.73■■□□□ 1.55
SNIP1-203ENST00000493916 CNPP09543 421 aaKnown RBP24.73■■□□□ 1.55
SNIP1-203ENST00000493916 USP41Q3LFD5 358 aa24.73■■□□□ 1.55
SNIP1-203ENST00000493916 SYCE2Q6PIF2 218 aa24.73■■□□□ 1.55
SNIP1-203ENST00000493916 ADHFE1Q8IWW8 467 aa24.73■■□□□ 1.55
SNIP1-203ENST00000493916 HVCN1Q96D96 273 aa24.73■■□□□ 1.55
SNIP1-203ENST00000493916 KLHL5Q96PQ7 755 aa24.73■■□□□ 1.55
SNIP1-203ENST00000493916 S1PR5Q9H228 398 aa24.73■■□□□ 1.55
SNIP1-203ENST00000493916 SLC38A7Q9NVC3 462 aa24.73■■□□□ 1.55
SNIP1-203ENST00000493916 DZANK1Q9NVP4 752 aa24.73■■□□□ 1.55
SNIP1-203ENST00000493916 RCOR1Q9UKL0 485 aa24.73■■□□□ 1.55
SNIP1-203ENST00000493916 PCDHA7Q9UN72 937 aa24.73■■□□□ 1.55
SNIP1-203ENST00000493916 USP15Q9Y4E8 981 aaPredicted RBP24.73■■□□□ 1.55
SNIP1-203ENST00000493916 C5orf42Q9H799 3197 aa24.73■■□□□ 1.55
SNIP1-203ENST00000493916 MEFVO15553 781 aaPredicted RBP24.72■■□□□ 1.55
SNIP1-203ENST00000493916 PPP1R37O75864 691 aa24.72■■□□□ 1.55
SNIP1-203ENST00000493916 MATR3P43243 847 aaKnown RBP eCLIP24.72■■□□□ 1.55
SNIP1-203ENST00000493916 ME1P48163 572 aa24.72■■□□□ 1.55
SNIP1-203ENST00000493916 ZP2Q05996 745 aa24.72■■□□□ 1.55
SNIP1-203ENST00000493916 BECN1Q14457 450 aa24.72■■□□□ 1.55
SNIP1-203ENST00000493916 KYAT1Q16773 422 aa24.72■■□□□ 1.55
SNIP1-203ENST00000493916 ZNF720Q7Z2F6 126 aa24.72■■□□□ 1.55
SNIP1-203ENST00000493916 SUSD6Q92537 303 aa24.72■■□□□ 1.55
SNIP1-203ENST00000493916 ZMAT2Q96NC0 199 aaKnown RBP24.72■■□□□ 1.55
SNIP1-203ENST00000493916 STRA6Q9BX79 667 aa24.72■■□□□ 1.55
SNIP1-203ENST00000493916 LRRC27Q9C0I9 530 aa24.72■■□□□ 1.55
SNIP1-203ENST00000493916 RXFP1Q9HBX9 757 aa24.72■■□□□ 1.55
SNIP1-203ENST00000493916 OLFML3Q9NRN5 406 aa24.72■■□□□ 1.55
SNIP1-203ENST00000493916 KBTBD4Q9NVX7 518 aa24.72■■□□□ 1.55
SNIP1-203ENST00000493916 C2CD2LO14523 706 aa24.71■■□□□ 1.55
SNIP1-203ENST00000493916 FAM189A1O60320 539 aa24.71■■□□□ 1.55
SNIP1-203ENST00000493916 ELAVL2Q12926 359 aaKnown RBP24.71■■□□□ 1.55
SNIP1-203ENST00000493916 SLC10A6Q3KNW5 377 aa24.71■■□□□ 1.55
SNIP1-203ENST00000493916 TPRNQ4KMQ1 711 aa24.71■■□□□ 1.55
SNIP1-203ENST00000493916 ZC2HC1CQ53FD0 456 aaPredicted RBP24.71■■□□□ 1.55
SNIP1-203ENST00000493916 KIAA1841Q6NSI8 718 aa24.71■■□□□ 1.55
SNIP1-203ENST00000493916 SLC39A4Q6P5W5 647 aa24.71■■□□□ 1.55
SNIP1-203ENST00000493916 IQUBQ8NA54 791 aa24.71■■□□□ 1.55
SNIP1-203ENST00000493916 POP1Q99575 1024 aaKnown RBP24.71■■□□□ 1.55
SNIP1-203ENST00000493916 PLEKHA5Q9HAU0 1116 aa24.71■■□□□ 1.55
SNIP1-203ENST00000493916 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.71■■□□□ 1.55
SNIP1-203ENST00000493916 A0A0B4J269 797 aa24.7■■□□□ 1.54
SNIP1-203ENST00000493916 C19orf67A6NJJ6 358 aa24.7■■□□□ 1.54
SNIP1-203ENST00000493916 CLTAP09496 248 aa24.7■■□□□ 1.54
SNIP1-203ENST00000493916 EPCAMP16422 314 aa24.7■■□□□ 1.54
SNIP1-203ENST00000493916 KLRC2P26717 231 aa24.7■■□□□ 1.54
SNIP1-203ENST00000493916 CLCN4P51793 760 aa24.7■■□□□ 1.54
SNIP1-203ENST00000493916 CLCNKBP51801 687 aa24.7■■□□□ 1.54
SNIP1-203ENST00000493916 CREMQ03060 361 aa24.7■■□□□ 1.54
SNIP1-203ENST00000493916 SOX4Q06945 474 aaPredicted RBP24.7■■□□□ 1.54
SNIP1-203ENST00000493916 UPP1Q16831 310 aa24.7■■□□□ 1.54
SNIP1-203ENST00000493916 SEZ6Q53EL9 994 aa24.7■■□□□ 1.54
SNIP1-203ENST00000493916 RESP18Q5W5W9 173 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms