RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 USP20Q9Y2K6 914 aa11.33□□□□□ -0.6
NUDCD3-210ENST00000493613 DCHS1Q96JQ0 3298 aa11.33□□□□□ -0.6
NUDCD3-210ENST00000493613 KRBA1A5PL33 1030 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 PRR23AA6NEV1 266 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 EDN1P05305 212 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 MUTP22033 750 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 RFX1P22670 979 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 TTC38Q5R3I4 469 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 LIN9Q5TKA1 542 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 HAUS3Q68CZ6 603 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 FRMD5Q7Z6J6 570 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 DTWD2Q8NBA8 298 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 LNX1Q8TBB1 728 aaPredicted RBP11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 PIK3R5Q8WYR1 880 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 IFT74Q96LB3 600 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 CLSTN3Q9BQT9 956 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 LLPHQ9BRT6 129 aaKnown RBP11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 FOXP1Q9H334 677 aaPredicted RBP11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 FBXW11Q9UKB1 542 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 CA14Q9ULX7 337 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 GDAQ9Y2T3 454 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 COL4A3Q01955 1670 aa11.32□□□□□ -0.6
NUDCD3-210ENST00000493613 TICRRQ7Z2Z1 1910 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 HNRNPA1P09651 372 aaKnown RBP eCLIP11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 FSHRP23945 695 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 CCT6AP40227 531 aaKnown RBP11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 RBM25P49756 843 aaKnown RBP11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 EFNA5P52803 228 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 ELAVL2Q12926 359 aaKnown RBP11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 HTR4Q13639 388 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 ANGPT1Q15389 498 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 DCAF4L1Q3SXM0 396 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 PPM1LQ5SGD2 360 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 EEF1DP3Q658K8 133 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 PDXDC1Q6P996 788 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 GRASPQ7Z6J2 395 aaPredicted RBP11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 FAM184AQ8NB25 1140 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 FBXO18Q8NFZ0 1043 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 GPR152Q8TDT2 470 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 KIFAP3Q92845 792 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 NKD2Q969F2 451 aaPredicted RBP11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 KIFC3Q9BVG8 833 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 BHMT2Q9H2M3 363 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 POLD4Q9HCU8 107 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 LRWD1Q9UFC0 647 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 POLIQ9UNA4 740 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 ZFP37Q9Y6Q3 630 aaPredicted RBP11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 NUMBLQ9Y6R0 609 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 TCHHQ07283 1943 aa11.31□□□□□ -0.6
NUDCD3-210ENST00000493613 ANHXE9PGG2 379 aa11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 ADAM12O43184 909 aa11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 C8AP07357 584 aa11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 FXR2P51116 673 aaKnown RBP eCLIP11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 NTHL1P78549 312 aa11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 NBR1Q14596 966 aa11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 ECM1Q16610 540 aa11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 GLRA4Q5JXX5 417 aa11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 ATF7IP2Q5U623 682 aa11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 APBB1IPQ7Z5R6 666 aaPredicted RBP11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 ST13P5Q8NFI4 369 aaPredicted RBP11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 TBC1D17Q9HA65 648 aa11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 DDX19AQ9NUU7 478 aaKnown RBP11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 DAXXQ9UER7 740 aaPredicted RBP11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 NOL7Q9UMY1 257 aaKnown RBP11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 KIAA1024Q9UPX6 916 aa11.3□□□□□ -0.6
NUDCD3-210ENST00000493613 TMEM189-UBE2V1I3L0A0 370 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 K7ERI5 159 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 CCL16O15467 120 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 XYLBO75191 536 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 B3GAT3O94766 335 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 HOXA9P31269 272 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 OR1D2P34982 312 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 TRAPPC10P48553 1259 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 CLCNKBP51801 687 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 HMGN5P82970 282 aaKnown RBP11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 SPECC1Q5M775 1068 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 AXDND1Q5T1B0 1012 aaPredicted RBP11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 NT5DC1Q5TFE4 455 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 C4orf32Q8N8J7 132 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 SLC7A14Q8TBB6 771 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 SNX29Q8TEQ0 813 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 FGF14Q92915 247 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 UROC1Q96N76 676 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 PPP1R10Q96QC0 940 aaKnown RBP11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 RAB34Q9BZG1 259 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 ARHGEF3Q9NR81 526 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 CDH7Q9ULB5 785 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 FAM186AA6NE01 2351 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 PHLPP2Q6ZVD8 1323 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 COL4A2P08572 1712 aa11.29□□□□□ -0.6
NUDCD3-210ENST00000493613 TSC2P49815 1807 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 RIF1Q5UIP0 2472 aaKnown RBP11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 CCDC169A6NNP5 214 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 TRAPPC3O43617 180 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 FGFR3P22607 806 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 IGFBP6P24592 240 aaPredicted RBP11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 YARSP54577 528 aaKnown RBP11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 PEX3P56589 373 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 PTGDRQ13258 359 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms