RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 IVDP26440 423 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 TPP2P29144 1249 aaPredicted RBP12.46□□□□□ -0.41
HDAC4-210ENST00000493582 ADCY7P51828 1080 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 PABPC4Q13310 644 aaKnown RBP eCLIP12.46□□□□□ -0.41
HDAC4-210ENST00000493582 THOC5Q13769 683 aaKnown RBP12.46□□□□□ -0.41
HDAC4-210ENST00000493582 SPARCL1Q14515 664 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 SGO2Q562F6 1265 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 SESTD1Q86VW0 696 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 MAML1Q92585 1016 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 TMEM165Q9HC07 324 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 TFCP2L1Q9NZI6 479 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 SLIT2O94813 1529 aa12.46□□□□□ -0.41
HDAC4-210ENST00000493582 WDR91A4D1P6 747 aa12.46□□□□□ -0.42
HDAC4-210ENST00000493582 SFI1A8K8P3 1242 aa12.46□□□□□ -0.42
HDAC4-210ENST00000493582 USP17L5A8MUK1 530 aa12.46□□□□□ -0.42
HDAC4-210ENST00000493582 CALUO43852 315 aaPredicted RBP12.46□□□□□ -0.42
HDAC4-210ENST00000493582 CCDC22O60826 627 aa12.46□□□□□ -0.42
HDAC4-210ENST00000493582 MED24O75448 989 aa12.46□□□□□ -0.42
HDAC4-210ENST00000493582 ADCY8P40145 1251 aa12.46□□□□□ -0.42
HDAC4-210ENST00000493582 SLC1A5Q15758 541 aa12.46□□□□□ -0.42
HDAC4-210ENST00000493582 HP1BP3Q5SSJ5 553 aaPredicted RBP12.46□□□□□ -0.42
HDAC4-210ENST00000493582 VPS52Q8N1B4 723 aa12.46□□□□□ -0.42
HDAC4-210ENST00000493582 DENND1AQ8TEH3 1009 aa12.46□□□□□ -0.42
HDAC4-210ENST00000493582 MCUR1Q96AQ8 359 aa12.46□□□□□ -0.42
HDAC4-210ENST00000493582 MMADHCQ9H3L0 296 aaPredicted RBP12.46□□□□□ -0.42
HDAC4-210ENST00000493582 SYNCQ9H7C4 482 aa12.46□□□□□ -0.42
HDAC4-210ENST00000493582 METTL14Q9HCE5 456 aaKnown RBP12.46□□□□□ -0.42
HDAC4-210ENST00000493582 ETNK2Q9NVF9 386 aa12.46□□□□□ -0.42
HDAC4-210ENST00000493582 SAP30BPQ9UHR5 308 aaKnown RBP12.46□□□□□ -0.42
HDAC4-210ENST00000493582 LNPEPQ9UIQ6 1025 aa12.46□□□□□ -0.42
HDAC4-210ENST00000493582 ANAPC5Q9UJX4 755 aa12.46□□□□□ -0.42
HDAC4-210ENST00000493582 LRP5O75197 1615 aa12.46□□□□□ -0.42
HDAC4-210ENST00000493582 ASTN1O14525 1302 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 POC1B-GALNT4F8VUJ3 575 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 PDXKO00764 312 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 TCEA3O75764 348 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 GGPS1O95749 300 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 PPP2R5CQ13362 524 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 ZRSR2Q15696 482 aaKnown RBP12.45□□□□□ -0.42
HDAC4-210ENST00000493582 CBWD6Q4V339 395 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 SLC45A4Q5BKX6 768 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 CBWD3Q5JTY5 395 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 CBWD5Q5RIA9 395 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 SNF8Q96H20 258 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 PRR11Q96HE9 360 aaPredicted RBP12.45□□□□□ -0.42
HDAC4-210ENST00000493582 REEP2Q9BRK0 252 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 ASCC2Q9H1I8 757 aaPredicted RBP12.45□□□□□ -0.42
HDAC4-210ENST00000493582 RHBDL2Q9NX52 303 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 STX18Q9P2W9 335 aaKnown RBP12.45□□□□□ -0.42
HDAC4-210ENST00000493582 COL22A1Q8NFW1 1626 aaPredicted RBP12.45□□□□□ -0.42
HDAC4-210ENST00000493582 A6NJR5 290 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 UBAP1LF5GYI3 381 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 IL2RBP14784 551 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 KCNA4P22459 653 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 CA4P22748 312 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 AMPD1P23109 780 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 SLC12A3P55017 1021 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 USP46P62068 366 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 PDK4Q16654 411 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 LIN52Q52LA3 116 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 C11orf63Q6NUN7 778 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 FAM118BQ9BPY3 351 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 LRRC19Q9H756 370 aa12.45□□□□□ -0.42
HDAC4-210ENST00000493582 A0A0G2JND7 137 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 GCNT3O95395 438 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 POTEJP0CG39 1038 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 TRIM49P0CI25 452 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 TRIM49CP0CI26 452 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 KRT15P19012 456 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 DEUP1Q05D60 604 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 PKN2Q16513 984 aaKnown RBP12.44□□□□□ -0.42
HDAC4-210ENST00000493582 RINLQ6ZS11 566 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 CAPN12Q6ZSI9 719 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 TRABD2AQ86V40 505 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 RFWD2Q8NHY2 731 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 AGPAT1Q99943 283 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 CCDC77Q9BR77 488 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 TRABDQ9H4I3 376 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 C2CD2LO14523 706 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 HNRNPRO43390 633 aaKnown RBP12.44□□□□□ -0.42
HDAC4-210ENST00000493582 RPL13P26373 211 aaKnown RBP12.44□□□□□ -0.42
HDAC4-210ENST00000493582 GPC5P78333 572 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 IZUMO2Q6UXV1 221 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 RBM12BQ8IXT5 1001 aaKnown RBP12.44□□□□□ -0.42
HDAC4-210ENST00000493582 PDCD7Q8N8D1 485 aaKnown RBP12.44□□□□□ -0.42
HDAC4-210ENST00000493582 NCSTNQ92542 709 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 CD101Q93033 1021 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 SAR1AQ9NR31 198 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 EURLQ9NYK6 297 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 TAS2R1Q9NYW7 299 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 KANSL3Q9P2N6 904 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 ERVV-1B6SEH8 477 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 PDLIM1O00151 329 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 MUTP22033 750 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 FMO5P49326 533 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 LSAMPQ13449 338 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 PHLDB3Q6NSJ2 640 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 NSMFQ6X4W1 530 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 ARHGAP18Q8N392 663 aa12.44□□□□□ -0.42
HDAC4-210ENST00000493582 ZNF75CPQ92670 426 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms