RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 CHAF1AQ13111 956 aaPredicted RBP5.46□□□□□ -1.54
CLIP4-212ENST00000493551 TOP3AQ13472 1001 aaPredicted RBP5.46□□□□□ -1.54
CLIP4-212ENST00000493551 PAN2Q504Q3 1202 aaKnown RBP5.46□□□□□ -1.54
CLIP4-212ENST00000493551 CD276Q5ZPR3 534 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 Q6ZPA2 131 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 DIS3LQ8TF46 1054 aaKnown RBP5.46□□□□□ -1.54
CLIP4-212ENST00000493551 CLEC4DQ8WXI8 215 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 ZKSCAN4Q969J2 545 aaPredicted RBP5.46□□□□□ -1.54
CLIP4-212ENST00000493551 SCYL1Q96KG9 808 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 CCDC140Q96MF4 163 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 MPHOSPH8Q99549 860 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 HTATIP2Q9BUP3 242 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 C12orf65Q9H3J6 166 aaKnown RBP5.46□□□□□ -1.54
CLIP4-212ENST00000493551 CD209Q9NNX6 404 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 PARPBPQ9NWS1 579 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 ZNF70Q9UC06 446 aaPredicted RBP5.46□□□□□ -1.54
CLIP4-212ENST00000493551 GABRQQ9UN88 632 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 RIPOR2Q9Y4F9 1068 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 NR2E3Q9Y5X4 410 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 MYPNQ86TC9 1320 aa5.46□□□□□ -1.54
CLIP4-212ENST00000493551 ZNF839A8K0R7 811 aa5.45□□□□□ -1.54
CLIP4-212ENST00000493551 MATN2O00339 956 aa5.45□□□□□ -1.54
CLIP4-212ENST00000493551 CHL1O00533 1208 aa5.45□□□□□ -1.54
CLIP4-212ENST00000493551 IL18BPO95998 194 aa5.45□□□□□ -1.54
CLIP4-212ENST00000493551 TFRCP02786 760 aaKnown RBP5.45□□□□□ -1.54
CLIP4-212ENST00000493551 IGKV5-2P06315 115 aa5.45□□□□□ -1.54
CLIP4-212ENST00000493551 MSX2P35548 267 aaPredicted RBP5.45□□□□□ -1.54
CLIP4-212ENST00000493551 MRPS21P82921 87 aaKnown RBP5.45□□□□□ -1.54
CLIP4-212ENST00000493551 HHEXQ03014 270 aa5.45□□□□□ -1.54
CLIP4-212ENST00000493551 LMOD3Q0VAK6 560 aa5.45□□□□□ -1.54
CLIP4-212ENST00000493551 NFYCQ13952 458 aa5.45□□□□□ -1.54
CLIP4-212ENST00000493551 ARHGEF6Q15052 776 aa5.45□□□□□ -1.54
CLIP4-212ENST00000493551 MIGA2Q7L4E1 593 aa5.45□□□□□ -1.54
CLIP4-212ENST00000493551 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.45□□□□□ -1.54
CLIP4-212ENST00000493551 CCDC191Q8NCU4 936 aa5.45□□□□□ -1.54
CLIP4-212ENST00000493551 PIP4K2CQ8TBX8 421 aa5.45□□□□□ -1.54
CLIP4-212ENST00000493551 U2AF1L4Q8WU68 220 aaKnown RBP5.45□□□□□ -1.54
CLIP4-212ENST00000493551 DEFB118Q96PH6 123 aa5.45□□□□□ -1.54
CLIP4-212ENST00000493551 TACO1Q9BSH4 297 aaKnown RBP5.45□□□□□ -1.54
CLIP4-212ENST00000493551 PUF60Q9UHX1 559 aaKnown RBP5.45□□□□□ -1.54
CLIP4-212ENST00000493551 EFR3BQ9Y2G0 817 aa5.45□□□□□ -1.54
CLIP4-212ENST00000493551 GIT1Q9Y2X7 761 aa5.45□□□□□ -1.54
CLIP4-212ENST00000493551 CLSPNQ9HAW4 1339 aa5.45□□□□□ -1.54
CLIP4-212ENST00000493551 COL1A1P02452 1464 aaPredicted RBP5.45□□□□□ -1.54
CLIP4-212ENST00000493551 PI4KAP2A4QPH2 592 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 TLR2O60603 784 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 HSP90B1P14625 803 aaKnown RBP5.44□□□□□ -1.54
CLIP4-212ENST00000493551 ADRA1BP35368 520 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 GYG1P46976 350 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 RRADP55042 308 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 NCAPHQ15003 741 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 G2E3Q7L622 706 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 TMPRSS6Q8IU80 811 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 PI4KAP1Q8N8J0 262 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 C8orf58Q8NAV2 365 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 PAWRQ96IZ0 340 aaKnown RBP5.44□□□□□ -1.54
CLIP4-212ENST00000493551 CDIP1Q9H305 208 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 PNNQ9H307 717 aaKnown RBP5.44□□□□□ -1.54
CLIP4-212ENST00000493551 PRO3102Q9H379 93 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 SLC2A4RGQ9NR83 387 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 PLA2G3Q9NZ20 509 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 NUB1Q9Y5A7 615 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 PPP2R3BQ9Y5P8 575 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 CENPFP49454 3210 aa5.44□□□□□ -1.54
CLIP4-212ENST00000493551 PDHXO00330 501 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 ARHGAP6O43182 974 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 TBX1O43435 398 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 WDHD1O75717 1129 aaPredicted RBP5.43□□□□□ -1.54
CLIP4-212ENST00000493551 DDX58O95786 925 aaKnown RBP5.43□□□□□ -1.54
CLIP4-212ENST00000493551 GJB1P08034 283 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 CETPP11597 493 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 ETV4P43268 484 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 GJA8P48165 433 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 FANCCQ00597 558 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 TCP10Q12799 353 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 TUSC3Q13454 348 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 SNAPC2Q13487 334 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 NOLC1Q14978 699 aaKnown RBP eCLIP5.43□□□□□ -1.54
CLIP4-212ENST00000493551 PRSS53Q2L4Q9 553 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 TAF7LQ5H9L4 462 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 MFSD14BQ5SR56 506 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 ZNF804AQ7Z570 1209 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 TSPYL6Q8N831 410 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.43□□□□□ -1.54
CLIP4-212ENST00000493551 MICAL1Q8TDZ2 1067 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 TSR2Q969E8 191 aaKnown RBP5.43□□□□□ -1.54
CLIP4-212ENST00000493551 ANKRD2Q9GZV1 360 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 METTL5Q9NRN9 209 aaKnown RBP5.43□□□□□ -1.54
CLIP4-212ENST00000493551 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.43□□□□□ -1.54
CLIP4-212ENST00000493551 BRCA2P51587 3418 aa5.43□□□□□ -1.54
CLIP4-212ENST00000493551 ESYT3A0FGR9 886 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 ANKRD18BA2A2Z9 1011 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 ADCY3O60266 1144 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 KCNJ6P48051 423 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 UBXN2AP68543 259 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 NEXNQ0ZGT2 675 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 TNFAIP1Q13829 316 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 WDR43Q15061 677 aaKnown RBP eCLIP5.42□□□□□ -1.54
CLIP4-212ENST00000493551 LAIR1Q6GTX8 287 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms