RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 KMT2BQ9UMN6 2715 aaPredicted RBP19.57■□□□□ 0.72
NUP50-218ENST00000493456 CASTOR2A6NHX0 329 aa19.57■□□□□ 0.72
NUP50-218ENST00000493456 NCAM2O15394 837 aa19.57■□□□□ 0.72
NUP50-218ENST00000493456 CSTF1Q05048 431 aaKnown RBP19.57■□□□□ 0.72
NUP50-218ENST00000493456 ZBTB41Q5SVQ8 909 aa19.57■□□□□ 0.72
NUP50-218ENST00000493456 PPP4R3CPQ6ZMV5 832 aa19.57■□□□□ 0.72
NUP50-218ENST00000493456 CDR2LQ86X02 465 aaPredicted RBP19.57■□□□□ 0.72
NUP50-218ENST00000493456 CEP57Q86XR8 500 aa19.57■□□□□ 0.72
NUP50-218ENST00000493456 ZBTB44Q8NCP5 570 aa19.57■□□□□ 0.72
NUP50-218ENST00000493456 ITFG1Q8TB96 612 aa19.57■□□□□ 0.72
NUP50-218ENST00000493456 SLC7A14Q8TBB6 771 aa19.57■□□□□ 0.72
NUP50-218ENST00000493456 NELL2Q99435 816 aa19.57■□□□□ 0.72
NUP50-218ENST00000493456 EIF2AK1Q9BQI3 630 aaKnown RBP19.57■□□□□ 0.72
NUP50-218ENST00000493456 EPC1Q9H2F5 836 aa19.57■□□□□ 0.72
NUP50-218ENST00000493456 PRMT7Q9NVM4 692 aaPredicted RBP19.57■□□□□ 0.72
NUP50-218ENST00000493456 CACNG4Q9UBN1 327 aa19.57■□□□□ 0.72
NUP50-218ENST00000493456 MTF2Q9Y483 593 aaPredicted RBP19.57■□□□□ 0.72
NUP50-218ENST00000493456 PRR5-ARHGAP8B1AHC4 643 aa19.56■□□□□ 0.72
NUP50-218ENST00000493456 THP07101 528 aa19.56■□□□□ 0.72
NUP50-218ENST00000493456 RPS9P46781 194 aaKnown RBP19.56■□□□□ 0.72
NUP50-218ENST00000493456 RARRES1P49788 294 aa19.56■□□□□ 0.72
NUP50-218ENST00000493456 ARHGAP8P85298 464 aa19.56■□□□□ 0.72
NUP50-218ENST00000493456 STK3Q13188 491 aa19.56■□□□□ 0.72
NUP50-218ENST00000493456 PABPC1LQ4VXU2 614 aaKnown RBP19.56■□□□□ 0.72
NUP50-218ENST00000493456 AXDND1Q5T1B0 1012 aaPredicted RBP19.56■□□□□ 0.72
NUP50-218ENST00000493456 NPAS3Q8IXF0 933 aa19.56■□□□□ 0.72
NUP50-218ENST00000493456 HSD17B14Q9BPX1 270 aa19.56■□□□□ 0.72
NUP50-218ENST00000493456 KXD1Q9BQD3 176 aa19.56■□□□□ 0.72
NUP50-218ENST00000493456 POLR3FQ9H1D9 316 aaPredicted RBP19.56■□□□□ 0.72
NUP50-218ENST00000493456 SMG5Q9UPR3 1016 aaKnown RBP19.56■□□□□ 0.72
NUP50-218ENST00000493456 CACNA1BQ00975 2339 aa19.56■□□□□ 0.72
NUP50-218ENST00000493456 COL4A3Q01955 1670 aa19.56■□□□□ 0.72
NUP50-218ENST00000493456 STK36Q9NRP7 1315 aa19.55■□□□□ 0.72
NUP50-218ENST00000493456 PTGESO14684 152 aa19.55■□□□□ 0.72
NUP50-218ENST00000493456 EPB41L2O43491 1005 aaKnown RBP19.55■□□□□ 0.72
NUP50-218ENST00000493456 LILRB5O75023 590 aa19.55■□□□□ 0.72
NUP50-218ENST00000493456 LMNB2Q03252 620 aa19.55■□□□□ 0.72
NUP50-218ENST00000493456 RAB33AQ14088 237 aa19.55■□□□□ 0.72
NUP50-218ENST00000493456 CDCA2Q69YH5 1023 aaPredicted RBP19.55■□□□□ 0.72
NUP50-218ENST00000493456 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.55■□□□□ 0.72
NUP50-218ENST00000493456 NELL1Q92832 810 aa19.55■□□□□ 0.72
NUP50-218ENST00000493456 CLDN23Q96B33 292 aa19.55■□□□□ 0.72
NUP50-218ENST00000493456 FAM126AQ9BYI3 521 aaPredicted RBP19.55■□□□□ 0.72
NUP50-218ENST00000493456 DOCK6Q96HP0 2047 aa19.54■□□□□ 0.72
NUP50-218ENST00000493456 LRRIQ4A6NIV6 560 aa19.54■□□□□ 0.72
NUP50-218ENST00000493456 N4BP3O15049 544 aa19.54■□□□□ 0.72
NUP50-218ENST00000493456 ADAM12O43184 909 aa19.54■□□□□ 0.72
NUP50-218ENST00000493456 ECI2O75521 394 aa19.54■□□□□ 0.72
NUP50-218ENST00000493456 FAM187BQ17R55 369 aa19.54■□□□□ 0.72
NUP50-218ENST00000493456 TPRG1Q6ZUI0 275 aa19.54■□□□□ 0.72
NUP50-218ENST00000493456 ZBTB8OSQ8IWT0 167 aa19.54■□□□□ 0.72
NUP50-218ENST00000493456 OXER1Q8TDS5 423 aa19.54■□□□□ 0.72
NUP50-218ENST00000493456 CNTNAP3BQ96NU0 1288 aa19.54■□□□□ 0.72
NUP50-218ENST00000493456 CNTNAP3Q9BZ76 1288 aa19.54■□□□□ 0.72
NUP50-218ENST00000493456 PRMT8Q9NR22 394 aaPredicted RBP19.54■□□□□ 0.72
NUP50-218ENST00000493456 GDE1Q9NZC3 331 aa19.54■□□□□ 0.72
NUP50-218ENST00000493456 DAXXQ9UER7 740 aaPredicted RBP19.54■□□□□ 0.72
NUP50-218ENST00000493456 PCDHA12Q9UN75 941 aa19.54■□□□□ 0.72
NUP50-218ENST00000493456 MRPS17Q9Y2R5 130 aaKnown RBP19.54■□□□□ 0.72
NUP50-218ENST00000493456 TBC1D4O60343 1298 aa19.53■□□□□ 0.72
NUP50-218ENST00000493456 RECQL4O94761 1208 aa19.53■□□□□ 0.72
NUP50-218ENST00000493456 CD72P21854 359 aa19.53■□□□□ 0.72
NUP50-218ENST00000493456 TARSP26639 723 aaKnown RBP19.53■□□□□ 0.72
NUP50-218ENST00000493456 ATXN1P54253 815 aaKnown RBP19.53■□□□□ 0.72
NUP50-218ENST00000493456 NAB2Q15742 525 aa19.53■□□□□ 0.72
NUP50-218ENST00000493456 ZNF852Q6ZMS4 543 aa19.53■□□□□ 0.72
NUP50-218ENST00000493456 MCPH1Q8NEM0 835 aa19.53■□□□□ 0.72
NUP50-218ENST00000493456 LARP6Q9BRS8 491 aaKnown RBP19.53■□□□□ 0.72
NUP50-218ENST00000493456 TM6SF1Q9BZW5 370 aa19.53■□□□□ 0.72
NUP50-218ENST00000493456 C2orf40Q9H1Z8 148 aa19.53■□□□□ 0.72
NUP50-218ENST00000493456 FZD8Q9H461 694 aa19.53■□□□□ 0.72
NUP50-218ENST00000493456 PDZD7Q9H5P4 517 aa19.53■□□□□ 0.72
NUP50-218ENST00000493456 HCFC1R1Q9NWW0 138 aa19.53■□□□□ 0.72
NUP50-218ENST00000493456 DNMT3BQ9UBC3 853 aaKnown RBP19.53■□□□□ 0.72
NUP50-218ENST00000493456 MTRRQ9UBK8 725 aa19.53■□□□□ 0.72
NUP50-218ENST00000493456 CDV3Q9UKY7 258 aaKnown RBP19.53■□□□□ 0.72
NUP50-218ENST00000493456 MRPS23Q9Y3D9 190 aaKnown RBP19.53■□□□□ 0.72
NUP50-218ENST00000493456 TMEM189-UBE2V1I3L0A0 370 aa19.52■□□□□ 0.72
NUP50-218ENST00000493456 USO1O60763 962 aaKnown RBP19.52■□□□□ 0.72
NUP50-218ENST00000493456 XRCC6P12956 609 aaKnown RBP eCLIP19.52■□□□□ 0.72
NUP50-218ENST00000493456 OR1D2P34982 312 aa19.52■□□□□ 0.72
NUP50-218ENST00000493456 CALCRLQ16602 461 aa19.52■□□□□ 0.72
NUP50-218ENST00000493456 DNASE1L2Q92874 299 aa19.52■□□□□ 0.72
NUP50-218ENST00000493456 ADPGKQ9BRR6 497 aa19.52■□□□□ 0.72
NUP50-218ENST00000493456 AVENQ9NQS1 362 aaPredicted RBP19.52■□□□□ 0.72
NUP50-218ENST00000493456 SNTG2Q9NY99 539 aa19.52■□□□□ 0.72
NUP50-218ENST00000493456 ACACBO00763 2458 aa19.51■□□□□ 0.71
NUP50-218ENST00000493456 FGFR3P22607 806 aa19.51■□□□□ 0.71
NUP50-218ENST00000493456 RBM25P49756 843 aaKnown RBP19.51■□□□□ 0.71
NUP50-218ENST00000493456 ADCY1Q08828 1119 aa19.51■□□□□ 0.71
NUP50-218ENST00000493456 SCRN1Q12765 414 aa19.51■□□□□ 0.71
NUP50-218ENST00000493456 TMEM132AQ24JP5 1023 aa19.51■□□□□ 0.71
NUP50-218ENST00000493456 EARS2Q5JPH6 523 aaKnown RBP19.51■□□□□ 0.71
NUP50-218ENST00000493456 PIGOQ8TEQ8 1089 aa19.51■□□□□ 0.71
NUP50-218ENST00000493456 RTKNQ9BST9 563 aa19.51■□□□□ 0.71
NUP50-218ENST00000493456 TTC12Q9H892 705 aaPredicted RBP19.51■□□□□ 0.71
NUP50-218ENST00000493456 BRMS1Q9HCU9 246 aa19.51■□□□□ 0.71
NUP50-218ENST00000493456 GMEB2Q9UKD1 530 aa19.51■□□□□ 0.71
NUP50-218ENST00000493456 TPRP12270 2363 aaKnown RBP19.51■□□□□ 0.71
NUP50-218ENST00000493456 VWA8A3KMH1 1905 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms