RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 KRT80Q6KB66 452 aa22.34■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 MID2Q9UJV3 735 aa22.34■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 CFLARO15519 480 aa22.34■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 PPP4CP60510 307 aa22.34■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 TNFAIP1Q13829 316 aa22.34■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 PREPLQ4J6C6 727 aaPredicted RBP22.34■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 ZBTB33Q86T24 672 aa22.34■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 TMEM117Q9H0C3 514 aa22.34■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 GTF3C4Q9UKN8 822 aa22.34■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 CCDC195A0A1B0GUA6 201 aa22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 GOLGA8RI6L899 631 aa22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 NOP14P78316 857 aaKnown RBP22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 ADAM33Q9BZ11 813 aa22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 OSBPL8Q9BZF1 889 aa22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 APLFQ8IW19 511 aaPredicted RBP22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 GPD1LQ8N335 351 aa22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 PNMA5Q96PV4 448 aa22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 SEMA4AQ9H3S1 761 aa22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 WHRNQ9P202 907 aa22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 TARSP26639 723 aaKnown RBP22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 KCNMA1Q12791 1236 aa22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 TEX2Q8IWB9 1127 aa22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 TRIM56Q9BRZ2 755 aaKnown RBP22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 DAGLAQ9Y4D2 1042 aa22.33■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 DLG5Q8TDM6 1919 aa22.33■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 TMED1Q13445 227 aa22.33■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 TFDP1Q14186 410 aa22.33■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 FOXN3O00409 490 aaPredicted RBP22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 MED24O75448 989 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 HNRNPH3P31942 346 aaKnown RBP22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 RFC1P35251 1148 aaPredicted RBP22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 SATB1Q01826 763 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 PPP2R5CQ13362 524 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 SPDYCQ5MJ68 293 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 KIRREL3Q8IZU9 778 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 TRIML2Q8N7C3 387 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 PGM2Q96G03 612 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 POLR3CQ9BUI4 534 aaPredicted RBP22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 CDC42EP4Q9H3Q1 356 aaKnown RBP22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 CYP26B1Q9NR63 512 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 SMYD2Q9NRG4 433 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 CHORDC1Q9UHD1 332 aaPredicted RBP22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 TLK1Q9UKI8 766 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 G3BP2Q9UN86 482 aaKnown RBP22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 PI4K2BG5E9Z4 385 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 HSPA4LO95757 839 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 VHLP40337 213 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 CASP4P49662 377 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 KRT76Q01546 638 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 VGLL2Q8N8G2 317 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 CPA5Q8WXQ8 436 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 TATDN2Q93075 761 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 RXFP1Q9HBX9 757 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 DLGAP2Q9P1A6 1054 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 SLC9A2Q9UBY0 812 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 PHTF1Q9UMS5 762 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 MTO1Q9Y2Z2 717 aaKnown RBP22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 UBAP1LF5GYI3 381 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 ADPGKQ9BRR6 497 aa22.32■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 SHOX2O60902 331 aaPredicted RBP22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 GIT2Q14161 759 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 LVRNQ6Q4G3 990 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 ANO5Q75V66 913 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 DNAAF5Q86Y56 855 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 SLC26A7Q8TE54 656 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 AGPAT3Q9NRZ7 376 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 ARL4AP40617 200 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 CTCFP49711 727 aaPredicted RBP22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 MIGA2Q7L4E1 593 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 CCNYQ8ND76 341 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 SLC13A1Q9BZW2 595 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 GTPBP10A4D1E9 387 aaKnown RBP22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 AKAP3O75969 853 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 PSMC5P62195 406 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 CCDC97Q96F63 343 aaPredicted RBP22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 BLOC1S4Q9NUP1 217 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 ATXN2Q99700 1313 aaKnown RBP22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 CAPN9O14815 690 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 ENO1P06733 434 aaKnown RBP22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 SFNP31947 248 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 DNAL1Q4LDG9 190 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 RASSF3Q86WH2 238 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 ASNSD1Q9NWL6 643 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 ZHX2Q9Y6X8 837 aa22.31■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 INO80B-WBP1J3KQ70 363 aa22.3■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 TAP1Q03518 808 aa22.3■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 HIC1Q14526 733 aa22.3■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 IL17AQ16552 155 aa22.3■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 NLGN1Q8N2Q7 840 aa22.3■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 DNAAF3Q8N9W5 541 aa22.3■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 ICA1LQ8NDH6 482 aa22.3■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 INO80BQ9C086 356 aaPredicted RBP22.3■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 KLHL11Q9NVR0 708 aa22.3■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 C15orf41Q9Y2V0 281 aa22.3■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 RIMS1Q86UR5 1692 aaKnown RBP22.3■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 TTC4O95801 387 aa22.3■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 ELF3P78545 371 aaPredicted RBP22.3■■□□□ 1.16
CHKB-CPT1B-203ENST00000492556 KDSRQ06136 332 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms