RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 PPM1EQ8WY54 764 aa16.6■□□□□ 0.25
SS18L1-204ENST00000491916 BICD1Q96G01 975 aa16.6■□□□□ 0.25
SS18L1-204ENST00000491916 CNTN3Q9P232 1028 aa16.6■□□□□ 0.25
SS18L1-204ENST00000491916 PCDHB13Q9Y5F0 798 aa16.6■□□□□ 0.25
SS18L1-204ENST00000491916 PDCD11Q14690 1871 aaKnown RBP16.6■□□□□ 0.25
SS18L1-204ENST00000491916 OGTO15294 1046 aa16.59■□□□□ 0.25
SS18L1-204ENST00000491916 ALDH2P05091 517 aa16.59■□□□□ 0.25
SS18L1-204ENST00000491916 KCNE1P15382 129 aa16.59■□□□□ 0.25
SS18L1-204ENST00000491916 SOX4Q06945 474 aaPredicted RBP16.59■□□□□ 0.25
SS18L1-204ENST00000491916 DPYDQ12882 1025 aa16.59■□□□□ 0.25
SS18L1-204ENST00000491916 TCEAL5Q5H9L2 206 aa16.59■□□□□ 0.25
SS18L1-204ENST00000491916 GLRA4Q5JXX5 417 aa16.59■□□□□ 0.25
SS18L1-204ENST00000491916 FAM26FQ5R3K3 315 aa16.59■□□□□ 0.25
SS18L1-204ENST00000491916 CD300LGQ6UXG3 332 aa16.59■□□□□ 0.25
SS18L1-204ENST00000491916 CRELD2Q6UXH1 353 aaPredicted RBP16.59■□□□□ 0.25
SS18L1-204ENST00000491916 APBB1IPQ7Z5R6 666 aaPredicted RBP16.59■□□□□ 0.25
SS18L1-204ENST00000491916 ADGRD2Q7Z7M1 963 aa16.59■□□□□ 0.25
SS18L1-204ENST00000491916 RNF168Q8IYW5 571 aaPredicted RBP16.59■□□□□ 0.25
SS18L1-204ENST00000491916 MICALL1Q8N3F8 863 aa16.59■□□□□ 0.25
SS18L1-204ENST00000491916 TMEM130Q8N3G9 435 aa16.59■□□□□ 0.25
SS18L1-204ENST00000491916 SCFD1Q8WVM8 642 aa16.59■□□□□ 0.25
SS18L1-204ENST00000491916 RABGGTAQ92696 567 aa16.59■□□□□ 0.25
SS18L1-204ENST00000491916 ACAP3Q96P50 834 aa16.59■□□□□ 0.25
SS18L1-204ENST00000491916 ACCSQ96QU6 501 aa16.59■□□□□ 0.25
SS18L1-204ENST00000491916 CCDC94Q9BW85 323 aaPredicted RBP16.59■□□□□ 0.25
SS18L1-204ENST00000491916 CPSF3Q9UKF6 684 aaKnown RBP16.59■□□□□ 0.25
SS18L1-204ENST00000491916 C5orf42Q9H799 3197 aa16.59■□□□□ 0.25
SS18L1-204ENST00000491916 TTC26A0AVF1 554 aa16.58■□□□□ 0.24
SS18L1-204ENST00000491916 EIF3DO15371 548 aaKnown RBP eCLIP16.58■□□□□ 0.24
SS18L1-204ENST00000491916 THP07101 528 aa16.58■□□□□ 0.24
SS18L1-204ENST00000491916 CLTAP09496 248 aa16.58■□□□□ 0.24
SS18L1-204ENST00000491916 CXCL8P10145 99 aa16.58■□□□□ 0.24
SS18L1-204ENST00000491916 GTF2F1P35269 517 aaKnown RBP eCLIP16.58■□□□□ 0.24
SS18L1-204ENST00000491916 HYAL1Q12794 435 aa16.58■□□□□ 0.24
SS18L1-204ENST00000491916 TUSC3Q13454 348 aa16.58■□□□□ 0.24
SS18L1-204ENST00000491916 ALCAMQ13740 583 aa16.58■□□□□ 0.24
SS18L1-204ENST00000491916 ZBTB6Q15916 424 aa16.58■□□□□ 0.24
SS18L1-204ENST00000491916 ENOX2Q16206 610 aaKnown RBP16.58■□□□□ 0.24
SS18L1-204ENST00000491916 KMT5BQ4FZB7 885 aa16.58■□□□□ 0.24
SS18L1-204ENST00000491916 TAS1R1Q7RTX1 841 aa16.58■□□□□ 0.24
SS18L1-204ENST00000491916 DDX53Q86TM3 631 aaKnown RBP16.58■□□□□ 0.24
SS18L1-204ENST00000491916 IPO9Q96P70 1041 aaKnown RBP16.58■□□□□ 0.24
SS18L1-204ENST00000491916 NSUN3Q9H649 340 aaKnown RBP16.58■□□□□ 0.24
SS18L1-204ENST00000491916 TLR9Q9NR96 1032 aa16.58■□□□□ 0.24
SS18L1-204ENST00000491916 FAN1Q9Y2M0 1017 aa16.58■□□□□ 0.24
SS18L1-204ENST00000491916 ANK1P16157 1881 aa16.57■□□□□ 0.24
SS18L1-204ENST00000491916 TGFB1I1O43294 461 aa16.57■□□□□ 0.24
SS18L1-204ENST00000491916 NR1I2O75469 434 aa16.57■□□□□ 0.24
SS18L1-204ENST00000491916 CSPG5O95196 566 aa16.57■□□□□ 0.24
SS18L1-204ENST00000491916 MYL1P05976 194 aa16.57■□□□□ 0.24
SS18L1-204ENST00000491916 OR1G1P47890 313 aa16.57■□□□□ 0.24
SS18L1-204ENST00000491916 STK4Q13043 487 aa16.57■□□□□ 0.24
SS18L1-204ENST00000491916 BMT2Q1RMZ1 405 aa16.57■□□□□ 0.24
SS18L1-204ENST00000491916 TIGD5Q53EQ6 642 aa16.57■□□□□ 0.24
SS18L1-204ENST00000491916 CLEC17AQ6ZS10 378 aa16.57■□□□□ 0.24
SS18L1-204ENST00000491916 KIAA0895Q8NCT3 520 aa16.57■□□□□ 0.24
SS18L1-204ENST00000491916 FAM193BQ96PV7 902 aaPredicted RBP16.57■□□□□ 0.24
SS18L1-204ENST00000491916 RPS6KC1Q96S38 1066 aa16.57■□□□□ 0.24
SS18L1-204ENST00000491916 MSTO1Q9BUK6 570 aa16.57■□□□□ 0.24
SS18L1-204ENST00000491916 ZBP1Q9H171 429 aa16.57■□□□□ 0.24
SS18L1-204ENST00000491916 SLC39A2Q9NP94 309 aa16.57■□□□□ 0.24
SS18L1-204ENST00000491916 PRG3Q9Y2Y8 225 aaPredicted RBP16.57■□□□□ 0.24
SS18L1-204ENST00000491916 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.56■□□□□ 0.24
SS18L1-204ENST00000491916 CARNS1A5YM72 827 aa16.56■□□□□ 0.24
SS18L1-204ENST00000491916 CASTOR2A6NHX0 329 aa16.56■□□□□ 0.24
SS18L1-204ENST00000491916 HIDE1A8MVS5 230 aa16.56■□□□□ 0.24
SS18L1-204ENST00000491916 LACTBL1A8MY62 500 aa16.56■□□□□ 0.24
SS18L1-204ENST00000491916 LILRB3O75022 631 aa16.56■□□□□ 0.24
SS18L1-204ENST00000491916 ACOT2P49753 483 aa16.56■□□□□ 0.24
SS18L1-204ENST00000491916 WNT7BP56706 349 aa16.56■□□□□ 0.24
SS18L1-204ENST00000491916 KRT17Q04695 432 aa16.56■□□□□ 0.24
SS18L1-204ENST00000491916 FAM160A1Q05DH4 1040 aa16.56■□□□□ 0.24
SS18L1-204ENST00000491916 CTC1Q2NKJ3 1217 aa16.56■□□□□ 0.24
SS18L1-204ENST00000491916 SLFN12LQ6IEE8 588 aa16.56■□□□□ 0.24
SS18L1-204ENST00000491916 C18orf25Q96B23 403 aaPredicted RBP16.56■□□□□ 0.24
SS18L1-204ENST00000491916 TMEM169Q96HH4 297 aa16.56■□□□□ 0.24
SS18L1-204ENST00000491916 CBWD1Q9BRT8 395 aa16.56■□□□□ 0.24
SS18L1-204ENST00000491916 GPR62Q9BZJ7 368 aa16.56■□□□□ 0.24
SS18L1-204ENST00000491916 PLEKHA5Q9HAU0 1116 aa16.56■□□□□ 0.24
SS18L1-204ENST00000491916 GOLGA2P5Q9HBQ8 144 aa16.56■□□□□ 0.24
SS18L1-204ENST00000491916 TOPORSQ9NS56 1045 aaPredicted RBP16.56■□□□□ 0.24
SS18L1-204ENST00000491916 AGO2Q9UKV8 859 aaKnown RBP16.56■□□□□ 0.24
SS18L1-204ENST00000491916 C2orf71A6NGG8 1288 aa16.55■□□□□ 0.24
SS18L1-204ENST00000491916 RHOBTB3O94955 611 aa16.55■□□□□ 0.24
SS18L1-204ENST00000491916 KIF4AO95239 1232 aa16.55■□□□□ 0.24
SS18L1-204ENST00000491916 RPN1P04843 607 aaKnown RBP16.55■□□□□ 0.24
SS18L1-204ENST00000491916 CTSAP10619 480 aa16.55■□□□□ 0.24
SS18L1-204ENST00000491916 GARTP22102 1010 aa16.55■□□□□ 0.24
SS18L1-204ENST00000491916 LTBRP36941 435 aa16.55■□□□□ 0.24
SS18L1-204ENST00000491916 MATR3P43243 847 aaKnown RBP eCLIP16.55■□□□□ 0.24
SS18L1-204ENST00000491916 YARSP54577 528 aaKnown RBP16.55■□□□□ 0.24
SS18L1-204ENST00000491916 KCNC3Q14003 757 aa16.55■□□□□ 0.24
SS18L1-204ENST00000491916 UPP1Q16831 310 aa16.55■□□□□ 0.24
SS18L1-204ENST00000491916 VPS52Q8N1B4 723 aa16.55■□□□□ 0.24
SS18L1-204ENST00000491916 MRPL43Q8N983 215 aaKnown RBP16.55■□□□□ 0.24
SS18L1-204ENST00000491916 C3orf58Q8NDZ4 430 aa16.55■□□□□ 0.24
SS18L1-204ENST00000491916 SPATA20Q8TB22 786 aa16.55■□□□□ 0.24
SS18L1-204ENST00000491916 TCF25Q9BQ70 676 aa16.55■□□□□ 0.24
SS18L1-204ENST00000491916 TMEM206Q9H813 350 aa16.55■□□□□ 0.24
SS18L1-204ENST00000491916 PUF60Q9UHX1 559 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms