RNA–Protein interactions for RNA: ENST00000491769.1

COL6A3-212, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5

Gene COL6A3, Length 6,731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-212ENST00000491769 KDM5CP41229 1560 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 PLEKHG2Q9H7P9 1386 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 C19orf81C9J6K1 198 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 STXBP3O00186 592 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 STAG3L1P0CL83 205 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 AKR1B1P15121 316 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 TYK2P29597 1187 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 EIF2B5Q13144 721 aaKnown RBP13.86□□□□□ -0.19
COL6A3-212ENST00000491769 MED21Q13503 144 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 SLFNL1Q499Z3 407 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 SLC25A41Q8N5S1 370 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 TMEM169Q96HH4 297 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 HES6Q96HZ4 224 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 SLC38A7Q9NVC3 462 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 MZF1P28698 734 aaPredicted RBP13.86□□□□□ -0.19
COL6A3-212ENST00000491769 NCALDP61601 193 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 SKOR1P84550 965 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 LRRC8EQ6NSJ5 796 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 EPM2AIP1Q7L775 607 aaPredicted RBP13.86□□□□□ -0.19
COL6A3-212ENST00000491769 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.86□□□□□ -0.19
COL6A3-212ENST00000491769 ADAMTS12P58397 1594 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 CFAP43Q8NDM7 1665 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 H0Y626 953 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 GUCA1CO95843 209 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 GMPSP49915 693 aaPredicted RBP13.86□□□□□ -0.19
COL6A3-212ENST00000491769 GRM4Q14833 912 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 DRAP1Q14919 205 aaPredicted RBP13.86□□□□□ -0.19
COL6A3-212ENST00000491769 DGKDQ16760 1214 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 CYP4A22Q5TCH4 519 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 C11orf74Q86VG3 221 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 OLFML3Q9NRN5 406 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 STAP2Q9UGK3 403 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 NFU1Q9UMS0 254 aa13.86□□□□□ -0.19
COL6A3-212ENST00000491769 TCF3P15923 654 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 PTRHD1Q6GMV3 140 aaKnown RBP13.85□□□□□ -0.19
COL6A3-212ENST00000491769 RGS9BPQ6ZS82 235 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 TBC1D10CQ8IV04 446 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 PARVAQ9NVD7 372 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 ARHGAP26Q9UNA1 814 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 SPATA31A3Q5VYP0 1347 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 EMSYQ7Z589 1322 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 ATP1A1P05023 1023 aaKnown RBP13.85□□□□□ -0.19
COL6A3-212ENST00000491769 MYBL1P10243 752 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 RFX3P48380 749 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 SESN2P58004 480 aaPredicted RBP13.85□□□□□ -0.19
COL6A3-212ENST00000491769 GFPT1Q06210 699 aaPredicted RBP13.85□□□□□ -0.19
COL6A3-212ENST00000491769 ERAP2Q6P179 960 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 ZBED8Q8IZ13 594 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 CERKQ8TCT0 537 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 ELMO2Q96JJ3 720 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 C3orf70A6NLC5 250 aaPredicted RBP13.85□□□□□ -0.19
COL6A3-212ENST00000491769 FTLP02792 175 aaPredicted RBP13.85□□□□□ -0.19
COL6A3-212ENST00000491769 ACADMP11310 421 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 DMC1Q14565 340 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 C10orf53Q8N6V4 93 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 RABGGTAQ92696 567 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 L3MBTL3Q96JM7 780 aaPredicted RBP13.85□□□□□ -0.19
COL6A3-212ENST00000491769 SH2D3AQ9BRG2 576 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 MXD3Q9BW11 206 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 GPR63Q9BZJ6 419 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 KLHL11Q9NVR0 708 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 IMPDH2P12268 514 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 CSE1LP55060 971 aaKnown RBP13.85□□□□□ -0.19
COL6A3-212ENST00000491769 EIF3BP55884 814 aaKnown RBP13.85□□□□□ -0.19
COL6A3-212ENST00000491769 ALS2CLQ60I27 953 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 FAM47EQ6ZV65 393 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 GTF3C2Q8WUA4 911 aaPredicted RBP13.85□□□□□ -0.19
COL6A3-212ENST00000491769 APOL5Q9BWW9 433 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 FBXL21Q9UKT6 434 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 DTNAQ9Y4J8 743 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 CFAP74Q9C0B2 1584 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 PEG3Q9GZU2 1588 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 KCNN4O15554 427 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 PJA2O43164 708 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 TRIM49P0CI25 452 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 TRIM49CP0CI26 452 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 SFSWAPQ12872 951 aaKnown RBP13.85□□□□□ -0.19
COL6A3-212ENST00000491769 CDH18Q13634 790 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 CLMNQ96JQ2 1002 aa13.85□□□□□ -0.19
COL6A3-212ENST00000491769 MIF4GDA9UHW6 222 aaKnown RBP13.84□□□□□ -0.19
COL6A3-212ENST00000491769 TADA3O75528 432 aa13.84□□□□□ -0.19
COL6A3-212ENST00000491769 KRT14P02533 472 aa13.84□□□□□ -0.19
COL6A3-212ENST00000491769 CASP1P29466 404 aa13.84□□□□□ -0.19
COL6A3-212ENST00000491769 ACOT2P49753 483 aa13.84□□□□□ -0.19
COL6A3-212ENST00000491769 UBE3AQ05086 875 aa13.84□□□□□ -0.19
COL6A3-212ENST00000491769 GRIN1Q05586 938 aa13.84□□□□□ -0.19
COL6A3-212ENST00000491769 TMED1Q13445 227 aa13.84□□□□□ -0.19
COL6A3-212ENST00000491769 ABI2Q9NYB9 513 aaPredicted RBP13.84□□□□□ -0.19
COL6A3-212ENST00000491769 CD274Q9NZQ7 290 aa13.84□□□□□ -0.19
COL6A3-212ENST00000491769 ADGRL3Q9HAR2 1447 aa13.84□□□□□ -0.19
COL6A3-212ENST00000491769 NPC1L1Q9UHC9 1359 aa13.84□□□□□ -0.19
COL6A3-212ENST00000491769 C17orf102A2RUQ5 167 aa13.84□□□□□ -0.19
COL6A3-212ENST00000491769 IRAK1BP1Q5VVH5 260 aa13.84□□□□□ -0.19
COL6A3-212ENST00000491769 TDRD10Q5VZ19 366 aaKnown RBP13.84□□□□□ -0.19
COL6A3-212ENST00000491769 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL6A3-212ENST00000491769 MRPL40Q9NQ50 206 aaKnown RBP13.84□□□□□ -0.19
COL6A3-212ENST00000491769 H7C1W4 665 aa13.84□□□□□ -0.19
COL6A3-212ENST00000491769 CDC25BP30305 580 aa13.84□□□□□ -0.19
COL6A3-212ENST00000491769 SV2CQ496J9 727 aa13.84□□□□□ -0.19
COL6A3-212ENST00000491769 MFSD1Q9H3U5 465 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms