RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 NOMO2Q5JPE7 1267 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 CEP135Q66GS9 1140 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.02□□□□□ -0.97
RNF38-209ENST00000491349 C16orf59Q7L2K0 433 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 TAS1R3Q7RTX0 852 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 CDR2LQ86X02 465 aaPredicted RBP9.02□□□□□ -0.97
RNF38-209ENST00000491349 NT5DC4Q86YG4 428 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 C12orf56Q8IXR9 622 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 NELFBQ8WX92 580 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 ERCC4Q92889 916 aaPredicted RBP9.02□□□□□ -0.97
RNF38-209ENST00000491349 P2RX5Q93086 422 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 FAM213AQ9BRX8 229 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 STRA6Q9BX79 667 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 EIF2AQ9BY44 585 aaKnown RBP9.02□□□□□ -0.97
RNF38-209ENST00000491349 SLC28A3Q9HAS3 691 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 AGPAT3Q9NRZ7 376 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 SNTG2Q9NY99 539 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 HSPBP1Q9NZL4 362 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 STK39Q9UEW8 545 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 CTNND2Q9UQB3 1225 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 TRAF3IP3Q9Y228 551 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 INPP5FQ9Y2H2 1132 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 PCDHB12Q9Y5F1 795 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 STYXL1Q9Y6J8 313 aa9.02□□□□□ -0.97
RNF38-209ENST00000491349 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.01□□□□□ -0.97
RNF38-209ENST00000491349 ARHGEF37A1IGU5 675 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 SMTNL1A8MU46 457 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 CLIC2O15247 247 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 DGKIO75912 1065 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 RECQL4O94761 1208 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 NR3C1P04150 777 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 PRKCSHP14314 528 aaPredicted RBP9.01□□□□□ -0.97
RNF38-209ENST00000491349 LAG3P18627 525 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 ERCC5P28715 1186 aaPredicted RBP9.01□□□□□ -0.97
RNF38-209ENST00000491349 PSMC2P35998 433 aaKnown RBP9.01□□□□□ -0.97
RNF38-209ENST00000491349 ALDH7A1P49419 539 aaKnown RBP9.01□□□□□ -0.97
RNF38-209ENST00000491349 AP3M2P53677 418 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 DEFB103AP81534 67 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 SMAD3P84022 425 aaKnown RBP9.01□□□□□ -0.97
RNF38-209ENST00000491349 GRIK3Q13003 919 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 NFIL3Q16649 462 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 RALGAPA2Q2PPJ7 1873 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 CCDC40Q4G0X9 1142 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 PAN2Q504Q3 1202 aaKnown RBP9.01□□□□□ -0.97
RNF38-209ENST00000491349 C9orf50Q5SZB4 431 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 EEF1DP3Q658K8 133 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 FOXR2Q6PJQ5 311 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 RTN4RL1Q86UN2 441 aaPredicted RBP9.01□□□□□ -0.97
RNF38-209ENST00000491349 SLC9A9Q8IVB4 645 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 ADSSL1Q8N142 457 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 CCDC150Q8NCX0 1101 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 BEST2Q8NFU1 509 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 HELQQ8TDG4 1101 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 ANKRD36BP1Q96IX9 119 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 ZBTB45Q96K62 511 aaPredicted RBP9.01□□□□□ -0.97
RNF38-209ENST00000491349 UROC1Q96N76 676 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 NXF3Q9H4D5 531 aaKnown RBP9.01□□□□□ -0.97
RNF38-209ENST00000491349 PCIF1Q9H4Z3 704 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 ASB7Q9H672 318 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 METTL14Q9HCE5 456 aaKnown RBP9.01□□□□□ -0.97
RNF38-209ENST00000491349 PTPRHQ9HD43 1115 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 RBAKQ9NYW8 714 aaPredicted RBP9.01□□□□□ -0.97
RNF38-209ENST00000491349 RWDD2AQ9UIY3 292 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 DERAQ9Y315 318 aa9.01□□□□□ -0.97
RNF38-209ENST00000491349 ARL5CA6NH57 179 aa9□□□□□ -0.97
RNF38-209ENST00000491349 BECN2A8MW95 431 aa9□□□□□ -0.97
RNF38-209ENST00000491349 ANKRD63C9JTQ0 380 aa9□□□□□ -0.97
RNF38-209ENST00000491349 MAPK13O15264 365 aa9□□□□□ -0.97
RNF38-209ENST00000491349 LPXNO60711 386 aa9□□□□□ -0.97
RNF38-209ENST00000491349 TNNC2P02585 160 aa9□□□□□ -0.97
RNF38-209ENST00000491349 ALDH2P05091 517 aa9□□□□□ -0.97
RNF38-209ENST00000491349 TMEM191BP0C7N4 346 aa9□□□□□ -0.97
RNF38-209ENST00000491349 FGFR1P11362 822 aa9□□□□□ -0.97
RNF38-209ENST00000491349 ATF7P17544 494 aaPredicted RBP9□□□□□ -0.97
RNF38-209ENST00000491349 TNNI1P19237 187 aa9□□□□□ -0.97
RNF38-209ENST00000491349 PAX3P23760 479 aa9□□□□□ -0.97
RNF38-209ENST00000491349 AKAP5P24588 427 aa9□□□□□ -0.97
RNF38-209ENST00000491349 PPM1AP35813 382 aa9□□□□□ -0.97
RNF38-209ENST00000491349 MLH1P40692 756 aa9□□□□□ -0.97
RNF38-209ENST00000491349 ACOT2P49753 483 aa9□□□□□ -0.97
RNF38-209ENST00000491349 KRT17Q04695 432 aa9□□□□□ -0.97
RNF38-209ENST00000491349 KCNA1Q09470 495 aa9□□□□□ -0.97
RNF38-209ENST00000491349 CETN1Q12798 172 aa9□□□□□ -0.97
RNF38-209ENST00000491349 TMEM132DQ14C87 1099 aa9□□□□□ -0.97
RNF38-209ENST00000491349 SNRNP35Q16560 246 aaKnown RBP9□□□□□ -0.97
RNF38-209ENST00000491349 UBXN11Q5T124 520 aa9□□□□□ -0.97
RNF38-209ENST00000491349 RASIP1Q5U651 963 aa9□□□□□ -0.97
RNF38-209ENST00000491349 PPP2R2DQ66LE6 453 aa9□□□□□ -0.97
RNF38-209ENST00000491349 CENPPQ6IPU0 288 aa9□□□□□ -0.97
RNF38-209ENST00000491349 RBM43Q6ZSC3 357 aaKnown RBP9□□□□□ -0.97
RNF38-209ENST00000491349 INTS8Q75QN2 995 aaKnown RBP9□□□□□ -0.97
RNF38-209ENST00000491349 CREBRFQ8IUR6 639 aa9□□□□□ -0.97
RNF38-209ENST00000491349 SMYD4Q8IYR2 804 aaPredicted RBP9□□□□□ -0.97
RNF38-209ENST00000491349 CSGALNACT2Q8N6G5 542 aa9□□□□□ -0.97
RNF38-209ENST00000491349 RDH13Q8NBN7 331 aa9□□□□□ -0.97
RNF38-209ENST00000491349 SMG8Q8ND04 991 aaKnown RBP9□□□□□ -0.97
RNF38-209ENST00000491349 LINC01599Q8WXQ3 324 aa9□□□□□ -0.97
RNF38-209ENST00000491349 LPPQ93052 612 aa9□□□□□ -0.97
RNF38-209ENST00000491349 DDX27Q96GQ7 796 aaKnown RBP9□□□□□ -0.97
RNF38-209ENST00000491349 CEP63Q96MT8 703 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms