RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 CEP120Q8N960 986 aa17.29■□□□□ 0.36
SMPD4-220ENST00000491319 RSAD2Q8WXG1 361 aa17.29■□□□□ 0.36
SMPD4-220ENST00000491319 PIK3R5Q8WYR1 880 aa17.29■□□□□ 0.36
SMPD4-220ENST00000491319 RUSC1Q9BVN2 902 aa17.29■□□□□ 0.36
SMPD4-220ENST00000491319 PIDD1Q9HB75 910 aa17.29■□□□□ 0.36
SMPD4-220ENST00000491319 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.29■□□□□ 0.36
SMPD4-220ENST00000491319 ZDHHC7Q9NXF8 308 aa17.29■□□□□ 0.36
SMPD4-220ENST00000491319 FBXW11Q9UKB1 542 aa17.29■□□□□ 0.36
SMPD4-220ENST00000491319 MIA3Q5JRA6 1907 aa17.28■□□□□ 0.36
SMPD4-220ENST00000491319 CCDC169A6NNP5 214 aa17.28■□□□□ 0.36
SMPD4-220ENST00000491319 H0Y858 1186 aa17.28■□□□□ 0.36
SMPD4-220ENST00000491319 K7ERI5 159 aa17.28■□□□□ 0.36
SMPD4-220ENST00000491319 LAD1O00515 517 aa17.28■□□□□ 0.36
SMPD4-220ENST00000491319 GALR2O43603 387 aaPredicted RBP17.28■□□□□ 0.36
SMPD4-220ENST00000491319 NARSO43776 548 aaKnown RBP17.28■□□□□ 0.36
SMPD4-220ENST00000491319 HIP1RO75146 1068 aa17.28■□□□□ 0.36
SMPD4-220ENST00000491319 IGFBP6P24592 240 aaPredicted RBP17.28■□□□□ 0.36
SMPD4-220ENST00000491319 NPTX2P47972 431 aa17.28■□□□□ 0.36
SMPD4-220ENST00000491319 KRT79Q5XKE5 535 aa17.28■□□□□ 0.36
SMPD4-220ENST00000491319 ASTLQ6HA08 431 aaPredicted RBP17.28■□□□□ 0.36
SMPD4-220ENST00000491319 GET4Q7L5D6 327 aaPredicted RBP17.28■□□□□ 0.36
SMPD4-220ENST00000491319 TAS1R3Q7RTX0 852 aa17.28■□□□□ 0.36
SMPD4-220ENST00000491319 LNX1Q8TBB1 728 aaPredicted RBP17.28■□□□□ 0.36
SMPD4-220ENST00000491319 PPP1R10Q96QC0 940 aaKnown RBP17.28■□□□□ 0.36
SMPD4-220ENST00000491319 CLSTN3Q9BQT9 956 aa17.28■□□□□ 0.36
SMPD4-220ENST00000491319 MMTAG2Q9BU76 263 aaKnown RBP17.28■□□□□ 0.36
SMPD4-220ENST00000491319 PRKD2Q9BZL6 878 aa17.28■□□□□ 0.36
SMPD4-220ENST00000491319 GOLGA2P5Q9HBQ8 144 aa17.28■□□□□ 0.36
SMPD4-220ENST00000491319 IGSF9Q9P2J2 1179 aa17.28■□□□□ 0.36
SMPD4-220ENST00000491319 STK24Q9Y6E0 443 aa17.28■□□□□ 0.36
SMPD4-220ENST00000491319 ANK1P16157 1881 aa17.27■□□□□ 0.36
SMPD4-220ENST00000491319 USP34Q70CQ2 3546 aa17.27■□□□□ 0.36
SMPD4-220ENST00000491319 ADAM12O43184 909 aa17.27■□□□□ 0.36
SMPD4-220ENST00000491319 ZMYND10O75800 440 aa17.27■□□□□ 0.36
SMPD4-220ENST00000491319 PRPHP41219 470 aa17.27■□□□□ 0.36
SMPD4-220ENST00000491319 MAPK7Q13164 816 aa17.27■□□□□ 0.36
SMPD4-220ENST00000491319 DMP1Q13316 513 aaPredicted RBP17.27■□□□□ 0.36
SMPD4-220ENST00000491319 RABEP1Q15276 862 aa17.27■□□□□ 0.36
SMPD4-220ENST00000491319 ZNF568Q3ZCX4 644 aa17.27■□□□□ 0.36
SMPD4-220ENST00000491319 MCTP1Q6DN14 999 aa17.27■□□□□ 0.36
SMPD4-220ENST00000491319 FLCNQ8NFG4 579 aa17.27■□□□□ 0.36
SMPD4-220ENST00000491319 ATOH1Q92858 354 aaPredicted RBP17.27■□□□□ 0.36
SMPD4-220ENST00000491319 CDT1Q9H211 546 aa17.27■□□□□ 0.36
SMPD4-220ENST00000491319 ARHGAP28Q9P2N2 729 aa17.27■□□□□ 0.36
SMPD4-220ENST00000491319 EPS15L1Q9UBC2 864 aa17.27■□□□□ 0.36
SMPD4-220ENST00000491319 DNM3Q9UQ16 869 aa17.27■□□□□ 0.36
SMPD4-220ENST00000491319 TNFSF13BQ9Y275 285 aa17.27■□□□□ 0.36
SMPD4-220ENST00000491319 TMEM189-UBE2V1I3L0A0 370 aa17.26■□□□□ 0.35
SMPD4-220ENST00000491319 CD2BP2O95400 341 aaKnown RBP17.26■□□□□ 0.35
SMPD4-220ENST00000491319 CLCNKBP51801 687 aa17.26■□□□□ 0.35
SMPD4-220ENST00000491319 NUBP1P53384 320 aa17.26■□□□□ 0.35
SMPD4-220ENST00000491319 OSTNP61366 133 aa17.26■□□□□ 0.35
SMPD4-220ENST00000491319 ELAVL2Q12926 359 aaKnown RBP17.26■□□□□ 0.35
SMPD4-220ENST00000491319 ZRSR1Q15695 479 aaKnown RBP17.26■□□□□ 0.35
SMPD4-220ENST00000491319 RINT1Q6NUQ1 792 aa17.26■□□□□ 0.35
SMPD4-220ENST00000491319 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.26■□□□□ 0.35
SMPD4-220ENST00000491319 DTHD1Q6ZMT9 781 aa17.26■□□□□ 0.35
SMPD4-220ENST00000491319 C3orf58Q8NDZ4 430 aa17.26■□□□□ 0.35
SMPD4-220ENST00000491319 ACO2Q99798 780 aaKnown RBP17.26■□□□□ 0.35
SMPD4-220ENST00000491319 KMT5AQ9NQR1 393 aa17.26■□□□□ 0.35
SMPD4-220ENST00000491319 FBXL21Q9UKT6 434 aa17.26■□□□□ 0.35
SMPD4-220ENST00000491319 KIF3AQ9Y496 699 aa17.26■□□□□ 0.35
SMPD4-220ENST00000491319 ST18O60284 1047 aa17.25■□□□□ 0.35
SMPD4-220ENST00000491319 B3GAT3O94766 335 aa17.25■□□□□ 0.35
SMPD4-220ENST00000491319 CENPBP07199 599 aaPredicted RBP17.25■□□□□ 0.35
SMPD4-220ENST00000491319 C8AP07357 584 aa17.25■□□□□ 0.35
SMPD4-220ENST00000491319 CFHP08603 1231 aa17.25■□□□□ 0.35
SMPD4-220ENST00000491319 NPR3P17342 541 aa17.25■□□□□ 0.35
SMPD4-220ENST00000491319 GRM5P41594 1212 aa17.25■□□□□ 0.35
SMPD4-220ENST00000491319 CLCN5P51795 746 aa17.25■□□□□ 0.35
SMPD4-220ENST00000491319 ATP2C1P98194 919 aaPredicted RBP17.25■□□□□ 0.35
SMPD4-220ENST00000491319 SOX4Q06945 474 aaPredicted RBP17.25■□□□□ 0.35
SMPD4-220ENST00000491319 LIN9Q5TKA1 542 aa17.25■□□□□ 0.35
SMPD4-220ENST00000491319 CD300LGQ6UXG3 332 aa17.25■□□□□ 0.35
SMPD4-220ENST00000491319 C1orf186Q6ZWK4 172 aa17.25■□□□□ 0.35
SMPD4-220ENST00000491319 APBB1IPQ7Z5R6 666 aaPredicted RBP17.25■□□□□ 0.35
SMPD4-220ENST00000491319 SIX5Q8N196 739 aa17.25■□□□□ 0.35
SMPD4-220ENST00000491319 ST13P5Q8NFI4 369 aaPredicted RBP17.25■□□□□ 0.35
SMPD4-220ENST00000491319 TMX3Q96JJ7 454 aa17.25■□□□□ 0.35
SMPD4-220ENST00000491319 DRC1Q96MC2 740 aa17.25■□□□□ 0.35
SMPD4-220ENST00000491319 TARS2Q9BW92 718 aaKnown RBP17.25■□□□□ 0.35
SMPD4-220ENST00000491319 MRPL4Q9BYD3 311 aaKnown RBP17.25■□□□□ 0.35
SMPD4-220ENST00000491319 TMEM134Q9H6X4 195 aa17.25■□□□□ 0.35
SMPD4-220ENST00000491319 PTPRHQ9HD43 1115 aa17.25■□□□□ 0.35
SMPD4-220ENST00000491319 SMIM28A0A1B0GU29 152 aa17.24■□□□□ 0.35
SMPD4-220ENST00000491319 SFI1A8K8P3 1242 aa17.24■□□□□ 0.35
SMPD4-220ENST00000491319 I3L4J1 428 aa17.24■□□□□ 0.35
SMPD4-220ENST00000491319 SLC16A4O15374 487 aa17.24■□□□□ 0.35
SMPD4-220ENST00000491319 CCL16O15467 120 aa17.24■□□□□ 0.35
SMPD4-220ENST00000491319 LAMP2P13473 410 aa17.24■□□□□ 0.35
SMPD4-220ENST00000491319 FGFR3P22607 806 aa17.24■□□□□ 0.35
SMPD4-220ENST00000491319 TKTP29401 623 aaKnown RBP17.24■□□□□ 0.35
SMPD4-220ENST00000491319 NTHL1P78549 312 aa17.24■□□□□ 0.35
SMPD4-220ENST00000491319 RAD51AP2Q09MP3 1159 aa17.24■□□□□ 0.35
SMPD4-220ENST00000491319 UPP1Q16831 310 aa17.24■□□□□ 0.35
SMPD4-220ENST00000491319 RILPL1Q5EBL4 403 aa17.24■□□□□ 0.35
SMPD4-220ENST00000491319 PPM1LQ5SGD2 360 aa17.24■□□□□ 0.35
SMPD4-220ENST00000491319 PDXDC1Q6P996 788 aa17.24■□□□□ 0.35
SMPD4-220ENST00000491319 GRASPQ7Z6J2 395 aaPredicted RBP17.24■□□□□ 0.35
SMPD4-220ENST00000491319 PNMA5Q96PV4 448 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms