RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 FAM86C1Q9NVL1 165 aa15.01□□□□□ -0.01
COL6A3-211ENST00000491233 ZDHHC7Q9NXF8 308 aa15.01□□□□□ -0.01
COL6A3-211ENST00000491233 FBXW11Q9UKB1 542 aa15.01□□□□□ -0.01
COL6A3-211ENST00000491233 DUSP12Q9UNI6 340 aa15.01□□□□□ -0.01
COL6A3-211ENST00000491233 WDFY4Q6ZS81 3184 aa15.01□□□□□ -0.01
COL6A3-211ENST00000491233 CCDC169A6NNP5 214 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 K7ERI5 159 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 ST18O60284 1047 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 HIP1RO75146 1068 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 PAPLNO95428 1278 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 CDC25AP30304 524 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 NPTX2P47972 431 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 ELAVL2Q12926 359 aaKnown RBP15□□□□□ -0.01
COL6A3-211ENST00000491233 DMP1Q13316 513 aaPredicted RBP15□□□□□ -0.01
COL6A3-211ENST00000491233 ZNF568Q3ZCX4 644 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 DTHD1Q6ZMT9 781 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 GET4Q7L5D6 327 aaPredicted RBP15□□□□□ -0.01
COL6A3-211ENST00000491233 KCNK18Q7Z418 384 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 APBB1IPQ7Z5R6 666 aaPredicted RBP15□□□□□ -0.01
COL6A3-211ENST00000491233 CEP120Q8N960 986 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 MYADMQ96S97 322 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 NT5C3AQ9H0P0 336 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 CDT1Q9H211 546 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 KCNK12Q9HB15 430 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 IGSF9Q9P2J2 1179 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 DNM3Q9UQ16 869 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 TNFSF13BQ9Y275 285 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 MYH15Q9Y2K3 1946 aa15□□□□□ -0.01
COL6A3-211ENST00000491233 ZMYND10O75800 440 aa14.99□□□□□ -0.01
COL6A3-211ENST00000491233 MAPK7Q13164 816 aa14.99□□□□□ -0.01
COL6A3-211ENST00000491233 ZRSR1Q15695 479 aaKnown RBP14.99□□□□□ -0.01
COL6A3-211ENST00000491233 CWF19L1Q69YN2 538 aaKnown RBP14.99□□□□□ -0.01
COL6A3-211ENST00000491233 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.99□□□□□ -0.01
COL6A3-211ENST00000491233 LNX1Q8TBB1 728 aaPredicted RBP14.99□□□□□ -0.01
COL6A3-211ENST00000491233 DRC1Q96MC2 740 aa14.99□□□□□ -0.01
COL6A3-211ENST00000491233 PPP1R10Q96QC0 940 aaKnown RBP14.99□□□□□ -0.01
COL6A3-211ENST00000491233 CLSTN3Q9BQT9 956 aa14.99□□□□□ -0.01
COL6A3-211ENST00000491233 MMTAG2Q9BU76 263 aaKnown RBP14.99□□□□□ -0.01
COL6A3-211ENST00000491233 PRKD2Q9BZL6 878 aa14.99□□□□□ -0.01
COL6A3-211ENST00000491233 GOLGA2P5Q9HBQ8 144 aa14.99□□□□□ -0.01
COL6A3-211ENST00000491233 KMT5AQ9NQR1 393 aa14.99□□□□□ -0.01
COL6A3-211ENST00000491233 ARHGAP28Q9P2N2 729 aa14.99□□□□□ -0.01
COL6A3-211ENST00000491233 EPS15L1Q9UBC2 864 aa14.99□□□□□ -0.01
COL6A3-211ENST00000491233 TMEM189-UBE2V1I3L0A0 370 aa14.98□□□□□ -0.01
COL6A3-211ENST00000491233 GALR2O43603 387 aaPredicted RBP14.98□□□□□ -0.01
COL6A3-211ENST00000491233 NARSO43776 548 aaKnown RBP14.98□□□□□ -0.01
COL6A3-211ENST00000491233 CD2BP2O95400 341 aaKnown RBP14.98□□□□□ -0.01
COL6A3-211ENST00000491233 GRM5P41594 1212 aa14.98□□□□□ -0.01
COL6A3-211ENST00000491233 CLCNKBP51801 687 aa14.98□□□□□ -0.01
COL6A3-211ENST00000491233 NUBP1P53384 320 aa14.98□□□□□ -0.01
COL6A3-211ENST00000491233 ATP2C1P98194 919 aaPredicted RBP14.98□□□□□ -0.01
COL6A3-211ENST00000491233 RILPL1Q5EBL4 403 aa14.98□□□□□ -0.01
COL6A3-211ENST00000491233 LIN9Q5TKA1 542 aa14.98□□□□□ -0.01
COL6A3-211ENST00000491233 ASTLQ6HA08 431 aaPredicted RBP14.98□□□□□ -0.01
COL6A3-211ENST00000491233 RINT1Q6NUQ1 792 aa14.98□□□□□ -0.01
COL6A3-211ENST00000491233 TAS1R3Q7RTX0 852 aa14.98□□□□□ -0.01
COL6A3-211ENST00000491233 FLCNQ8NFG4 579 aa14.98□□□□□ -0.01
COL6A3-211ENST00000491233 RSAD2Q8WXG1 361 aa14.98□□□□□ -0.01
COL6A3-211ENST00000491233 TMX3Q96JJ7 454 aa14.98□□□□□ -0.01
COL6A3-211ENST00000491233 ACO2Q99798 780 aaKnown RBP14.98□□□□□ -0.01
COL6A3-211ENST00000491233 CCDC94Q9BW85 323 aaPredicted RBP14.98□□□□□ -0.01
COL6A3-211ENST00000491233 TARS2Q9BW92 718 aaKnown RBP14.98□□□□□ -0.01
COL6A3-211ENST00000491233 MRPL4Q9BYD3 311 aaKnown RBP14.98□□□□□ -0.01
COL6A3-211ENST00000491233 TMEM134Q9H6X4 195 aa14.98□□□□□ -0.01
COL6A3-211ENST00000491233 FBXL21Q9UKT6 434 aa14.98□□□□□ -0.01
COL6A3-211ENST00000491233 H0Y858 1186 aa14.97□□□□□ -0.01
COL6A3-211ENST00000491233 ADAM12O43184 909 aa14.97□□□□□ -0.01
COL6A3-211ENST00000491233 B3GAT3O94766 335 aa14.97□□□□□ -0.01
COL6A3-211ENST00000491233 C8AP07357 584 aa14.97□□□□□ -0.01
COL6A3-211ENST00000491233 HARSP12081 509 aaKnown RBP14.97□□□□□ -0.01
COL6A3-211ENST00000491233 FGFR3P22607 806 aa14.97□□□□□ -0.01
COL6A3-211ENST00000491233 IGFBP6P24592 240 aaPredicted RBP14.97□□□□□ -0.01
COL6A3-211ENST00000491233 GJB2P29033 226 aa14.97□□□□□ -0.01
COL6A3-211ENST00000491233 YARSP54577 528 aaKnown RBP14.97□□□□□ -0.01
COL6A3-211ENST00000491233 OSTNP61366 133 aa14.97□□□□□ -0.01
COL6A3-211ENST00000491233 PDXDC1Q6P996 788 aa14.97□□□□□ -0.01
COL6A3-211ENST00000491233 C1orf186Q6ZWK4 172 aa14.97□□□□□ -0.01
COL6A3-211ENST00000491233 C3orf58Q8NDZ4 430 aa14.97□□□□□ -0.01
COL6A3-211ENST00000491233 ATOH1Q92858 354 aaPredicted RBP14.97□□□□□ -0.01
COL6A3-211ENST00000491233 PNMA5Q96PV4 448 aa14.97□□□□□ -0.01
COL6A3-211ENST00000491233 IRF2BPLQ9H1B7 796 aa14.97□□□□□ -0.01
COL6A3-211ENST00000491233 PTPRHQ9HD43 1115 aa14.97□□□□□ -0.01
COL6A3-211ENST00000491233 TOPORSQ9NS56 1045 aaPredicted RBP14.97□□□□□ -0.01
COL6A3-211ENST00000491233 DAXXQ9UER7 740 aaPredicted RBP14.97□□□□□ -0.01
COL6A3-211ENST00000491233 SMIM28A0A1B0GU29 152 aa14.96□□□□□ -0.01
COL6A3-211ENST00000491233 VWA3AA6NCI4 1184 aa14.96□□□□□ -0.01
COL6A3-211ENST00000491233 SFI1A8K8P3 1242 aa14.96□□□□□ -0.01
COL6A3-211ENST00000491233 H3BQV1 296 aa14.96□□□□□ -0.01
COL6A3-211ENST00000491233 I3L4J1 428 aa14.96□□□□□ -0.01
COL6A3-211ENST00000491233 SLC16A4O15374 487 aa14.96□□□□□ -0.01
COL6A3-211ENST00000491233 CFHP08603 1231 aa14.96□□□□□ -0.01
COL6A3-211ENST00000491233 GUCY2CP25092 1073 aa14.96□□□□□ -0.01
COL6A3-211ENST00000491233 TKTP29401 623 aaKnown RBP14.96□□□□□ -0.01
COL6A3-211ENST00000491233 CLCN5P51795 746 aa14.96□□□□□ -0.01
COL6A3-211ENST00000491233 SOX4Q06945 474 aaPredicted RBP14.96□□□□□ -0.01
COL6A3-211ENST00000491233 RAD51AP2Q09MP3 1159 aa14.96□□□□□ -0.01
COL6A3-211ENST00000491233 UPP1Q16831 310 aa14.96□□□□□ -0.01
COL6A3-211ENST00000491233 PPM1LQ5SGD2 360 aa14.96□□□□□ -0.01
COL6A3-211ENST00000491233 HYIQ5T013 277 aa14.96□□□□□ -0.01
COL6A3-211ENST00000491233 DCLRE1AQ6PJP8 1040 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms