RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 EDEM3Q9BZQ6 932 aa24.63■■□□□ 1.53
USF3-203ENST00000491165 A0A087WZ62 844 aa24.62■■□□□ 1.53
USF3-203ENST00000491165 DENND3A2RUS2 1198 aa24.62■■□□□ 1.53
USF3-203ENST00000491165 MAPTP10636 758 aaKnown RBP24.62■■□□□ 1.53
USF3-203ENST00000491165 COL6A1P12109 1028 aa24.62■■□□□ 1.53
USF3-203ENST00000491165 CDK7P50613 346 aa24.62■■□□□ 1.53
USF3-203ENST00000491165 GPC3P51654 580 aa24.62■■□□□ 1.53
USF3-203ENST00000491165 NLRP11P59045 1033 aaKnown RBP24.62■■□□□ 1.53
USF3-203ENST00000491165 KIZQ2M2Z5 673 aa24.62■■□□□ 1.53
USF3-203ENST00000491165 MYOCDQ8IZQ8 938 aa24.62■■□□□ 1.53
USF3-203ENST00000491165 DHX38Q92620 1227 aaKnown RBP24.62■■□□□ 1.53
USF3-203ENST00000491165 RUBCNQ92622 972 aa24.62■■□□□ 1.53
USF3-203ENST00000491165 FDXACB1Q9BRP7 624 aaPredicted RBP24.62■■□□□ 1.53
USF3-203ENST00000491165 CRACR2AQ9BSW2 395 aa24.62■■□□□ 1.53
USF3-203ENST00000491165 SELENOOQ9BVL4 669 aa24.62■■□□□ 1.53
USF3-203ENST00000491165 GPR32O75388 356 aa24.62■■□□□ 1.53
USF3-203ENST00000491165 PDXDC1Q6P996 788 aa24.62■■□□□ 1.53
USF3-203ENST00000491165 KCTD10Q9H3F6 313 aa24.62■■□□□ 1.53
USF3-203ENST00000491165 ST6GALNAC4Q9H4F1 302 aa24.62■■□□□ 1.53
USF3-203ENST00000491165 LAMA2P24043 3122 aaKnown RBP24.61■■□□□ 1.53
USF3-203ENST00000491165 TTLL13PA6NNM8 815 aa24.61■■□□□ 1.53
USF3-203ENST00000491165 TISP43B9A030 160 aa24.61■■□□□ 1.53
USF3-203ENST00000491165 MYBL2P10244 700 aa24.61■■□□□ 1.53
USF3-203ENST00000491165 TCP1P17987 556 aaKnown RBP24.61■■□□□ 1.53
USF3-203ENST00000491165 MAGEA1P43355 309 aa24.61■■□□□ 1.53
USF3-203ENST00000491165 SMTNP53814 917 aa24.61■■□□□ 1.53
USF3-203ENST00000491165 BMT2Q1RMZ1 405 aa24.61■■□□□ 1.53
USF3-203ENST00000491165 CDCA2Q69YH5 1023 aaPredicted RBP24.61■■□□□ 1.53
USF3-203ENST00000491165 CACNA2D4Q7Z3S7 1137 aa24.61■■□□□ 1.53
USF3-203ENST00000491165 GSPT2Q8IYD1 628 aaKnown RBP24.61■■□□□ 1.53
USF3-203ENST00000491165 GINS2Q9Y248 185 aa24.61■■□□□ 1.53
USF3-203ENST00000491165 HYOU1Q9Y4L1 999 aa24.61■■□□□ 1.53
USF3-203ENST00000491165 PJA2O43164 708 aa24.61■■□□□ 1.53
USF3-203ENST00000491165 PPP2R5AQ15172 486 aa24.61■■□□□ 1.53
USF3-203ENST00000491165 PAWRQ96IZ0 340 aaKnown RBP24.61■■□□□ 1.53
USF3-203ENST00000491165 OSBPL9Q96SU4 736 aa24.61■■□□□ 1.53
USF3-203ENST00000491165 ADAMTS10Q9H324 1103 aa24.61■■□□□ 1.53
USF3-203ENST00000491165 EIF3DO15371 548 aaKnown RBP eCLIP24.6■■□□□ 1.53
USF3-203ENST00000491165 DEPTORQ8TB45 409 aa24.6■■□□□ 1.53
USF3-203ENST00000491165 TMEM40Q8WWA1 233 aa24.6■■□□□ 1.53
USF3-203ENST00000491165 GDAP1L1Q96MZ0 367 aa24.6■■□□□ 1.53
USF3-203ENST00000491165 TMEM106CQ9BVX2 250 aa24.6■■□□□ 1.53
USF3-203ENST00000491165 TSPYL1Q9H0U9 437 aa24.6■■□□□ 1.53
USF3-203ENST00000491165 TBX20Q9UMR3 447 aa24.6■■□□□ 1.53
USF3-203ENST00000491165 SSU72P8A0A1W2PR75 194 aa24.59■■□□□ 1.53
USF3-203ENST00000491165 TGFB1I1O43294 461 aa24.59■■□□□ 1.53
USF3-203ENST00000491165 PTENP60484 403 aa24.59■■□□□ 1.53
USF3-203ENST00000491165 FKBP3Q00688 224 aaKnown RBP24.59■■□□□ 1.53
USF3-203ENST00000491165 PTPN11Q06124 597 aaPredicted RBP24.59■■□□□ 1.53
USF3-203ENST00000491165 MAPK8IP2Q13387 824 aaPredicted RBP24.59■■□□□ 1.53
USF3-203ENST00000491165 TAF2Q6P1X5 1199 aa24.59■■□□□ 1.53
USF3-203ENST00000491165 CCDC113Q9H0I3 377 aa24.59■■□□□ 1.53
USF3-203ENST00000491165 KNOP1Q1ED39 458 aaKnown RBP24.59■■□□□ 1.53
USF3-203ENST00000491165 ASTE1Q2TB18 679 aaPredicted RBP24.59■■□□□ 1.53
USF3-203ENST00000491165 ZCWPW2Q504Y3 356 aa24.59■■□□□ 1.53
USF3-203ENST00000491165 FAM126BQ8IXS8 530 aa24.59■■□□□ 1.53
USF3-203ENST00000491165 SPATA4Q8NEY3 305 aa24.59■■□□□ 1.53
USF3-203ENST00000491165 AENQ8WTP8 325 aaKnown RBP24.59■■□□□ 1.53
USF3-203ENST00000491165 NLRP7Q8WX94 980 aa24.59■■□□□ 1.53
USF3-203ENST00000491165 OSMRQ99650 979 aa24.59■■□□□ 1.53
USF3-203ENST00000491165 OSBPL7Q9BZF2 842 aa24.59■■□□□ 1.53
USF3-203ENST00000491165 PCDHB13Q9Y5F0 798 aa24.59■■□□□ 1.53
USF3-203ENST00000491165 ASAP2O43150 1006 aa24.58■■□□□ 1.53
USF3-203ENST00000491165 EN2P19622 333 aaPredicted RBP24.58■■□□□ 1.53
USF3-203ENST00000491165 SLC39A5Q6ZMH5 540 aa24.58■■□□□ 1.53
USF3-203ENST00000491165 NUCKS1Q9H1E3 243 aaKnown RBP24.58■■□□□ 1.53
USF3-203ENST00000491165 GGCXP38435 758 aa24.58■■□□□ 1.52
USF3-203ENST00000491165 MBTD1Q05BQ5 628 aa24.58■■□□□ 1.52
USF3-203ENST00000491165 TRIM71Q2Q1W2 868 aaKnown RBP24.58■■□□□ 1.52
USF3-203ENST00000491165 CCDC40Q4G0X9 1142 aa24.58■■□□□ 1.52
USF3-203ENST00000491165 COL13A1Q5TAT6 717 aaPredicted RBP24.58■■□□□ 1.52
USF3-203ENST00000491165 CCDC181Q5TID7 509 aa24.58■■□□□ 1.52
USF3-203ENST00000491165 MAP4K3Q8IVH8 894 aa24.58■■□□□ 1.52
USF3-203ENST00000491165 CEP72Q9P209 647 aa24.58■■□□□ 1.52
USF3-203ENST00000491165 MYH10P35580 1976 aa24.57■■□□□ 1.52
USF3-203ENST00000491165 CTSHP09668 335 aa24.57■■□□□ 1.52
USF3-203ENST00000491165 GFPT1Q06210 699 aaPredicted RBP24.57■■□□□ 1.52
USF3-203ENST00000491165 KCNMA1Q12791 1236 aa24.57■■□□□ 1.52
USF3-203ENST00000491165 ANKLE1Q8NAG6 615 aa24.57■■□□□ 1.52
USF3-203ENST00000491165 LRRC1Q9BTT6 524 aa24.57■■□□□ 1.52
USF3-203ENST00000491165 FGFR4P22455 802 aa24.56■■□□□ 1.52
USF3-203ENST00000491165 HGSNATQ68CP4 663 aa24.56■■□□□ 1.52
USF3-203ENST00000491165 SLC39A4Q6P5W5 647 aa24.56■■□□□ 1.52
USF3-203ENST00000491165 GPIHBP1Q8IV16 184 aa24.56■■□□□ 1.52
USF3-203ENST00000491165 RNF10Q8N5U6 811 aaKnown RBP24.56■■□□□ 1.52
USF3-203ENST00000491165 CCDC155Q8N6L0 562 aa24.56■■□□□ 1.52
USF3-203ENST00000491165 KCNN1Q92952 543 aa24.56■■□□□ 1.52
USF3-203ENST00000491165 NOX5Q96PH1 765 aa24.56■■□□□ 1.52
USF3-203ENST00000491165 NFKBIZQ9BYH8 718 aa24.56■■□□□ 1.52
USF3-203ENST00000491165 NOD1Q9Y239 953 aa24.56■■□□□ 1.52
USF3-203ENST00000491165 K7ERI5 159 aa24.56■■□□□ 1.52
USF3-203ENST00000491165 PQBP1O60828 265 aaKnown RBP24.56■■□□□ 1.52
USF3-203ENST00000491165 CD4P01730 458 aa24.56■■□□□ 1.52
USF3-203ENST00000491165 CHRNA1P02708 482 aa24.56■■□□□ 1.52
USF3-203ENST00000491165 PTK7Q13308 1070 aa24.56■■□□□ 1.52
USF3-203ENST00000491165 TFDP1Q14186 410 aa24.56■■□□□ 1.52
USF3-203ENST00000491165 TDRD12Q587J7 1177 aaKnown RBP24.56■■□□□ 1.52
USF3-203ENST00000491165 SYN2Q92777 582 aaPredicted RBP24.56■■□□□ 1.52
USF3-203ENST00000491165 CEP63Q96MT8 703 aa24.56■■□□□ 1.52
USF3-203ENST00000491165 GOLGA6BA6NDN3 693 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms