RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 AXDND1Q5T1B0 1012 aaPredicted RBP17■□□□□ 0.31
SCAMP3-208ENST00000490999 POTEHQ6S545 545 aa17■□□□□ 0.31
SCAMP3-208ENST00000490999 OTUD6AQ7L8S5 288 aa17■□□□□ 0.31
SCAMP3-208ENST00000490999 TPH2Q8IWU9 490 aa17■□□□□ 0.31
SCAMP3-208ENST00000490999 GPR161Q8N6U8 529 aaKnown RBP17■□□□□ 0.31
SCAMP3-208ENST00000490999 NELL1Q92832 810 aa17■□□□□ 0.31
SCAMP3-208ENST00000490999 KCNB2Q92953 911 aa17■□□□□ 0.31
SCAMP3-208ENST00000490999 MCRS1Q96EZ8 462 aa17■□□□□ 0.31
SCAMP3-208ENST00000490999 FAM20AQ96MK3 541 aa17■□□□□ 0.31
SCAMP3-208ENST00000490999 POLR3FQ9H1D9 316 aaPredicted RBP17■□□□□ 0.31
SCAMP3-208ENST00000490999 ZSWIM4Q9H7M6 989 aa17■□□□□ 0.31
SCAMP3-208ENST00000490999 GMEB2Q9UKD1 530 aa17■□□□□ 0.31
SCAMP3-208ENST00000490999 NDRG2Q9UN36 371 aaKnown RBP17■□□□□ 0.31
SCAMP3-208ENST00000490999 DYNC1LI1Q9Y6G9 523 aaKnown RBP17■□□□□ 0.31
SCAMP3-208ENST00000490999 CCDC194A0A1B0GVG4 234 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 TTLL13PA6NNM8 815 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 PRR5-ARHGAP8B1AHC4 643 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 MARCH6O60337 910 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 DEXIO95424 95 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 CEBPBP17676 345 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 SDHBP21912 280 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 KCNA4P22459 653 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 HOXA9P31269 272 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 MAGEA9P43362 315 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 ARHGAP8P85298 464 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 SPEM2Q0P670 501 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 STK3Q13188 491 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 GRM2Q14416 872 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 PCBP1Q15365 356 aaKnown RBP eCLIP16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 NEK8Q86SG6 692 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 IFNLR1Q8IU57 520 aaPredicted RBP16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 CLDN23Q96B33 292 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 RTKNQ9BST9 563 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 GPRC5CQ9NQ84 441 aa16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 MRPS23Q9Y3D9 190 aaKnown RBP16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 MTCL1Q9Y4B5 1905 aaKnown RBP16.99■□□□□ 0.31
SCAMP3-208ENST00000490999 CEP295Q9C0D2 2601 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 CACNA1GO43497 2377 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 A0A087WWV3 80 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 FAM205CA6NFA0 338 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 CPLX1O14810 134 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 RECQL4O94761 1208 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 HSPA4P34932 840 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 OR1D2P34982 312 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 FZD5Q13467 585 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 TOB2Q14106 344 aaPredicted RBP16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 RSPO2Q6UXX9 243 aaPredicted RBP16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 ZNF852Q6ZMS4 543 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 PIK3AP1Q6ZUJ8 805 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 MAEAQ7L5Y9 396 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 FBXL16Q8N461 479 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 OXER1Q8TDS5 423 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 GJB4Q9NTQ9 266 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 SNTG2Q9NY99 539 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 USP20Q9Y2K6 914 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 CDY1Q9Y6F8 540 aa16.98■□□□□ 0.31
SCAMP3-208ENST00000490999 A0A1B0GUA9 196 aa16.97■□□□□ 0.31
SCAMP3-208ENST00000490999 LRRIQ4A6NIV6 560 aa16.97■□□□□ 0.31
SCAMP3-208ENST00000490999 NRG2O14511 850 aaPredicted RBP16.97■□□□□ 0.31
SCAMP3-208ENST00000490999 USO1O60763 962 aaKnown RBP16.97■□□□□ 0.31
SCAMP3-208ENST00000490999 ADRB1P08588 477 aa16.97■□□□□ 0.31
SCAMP3-208ENST00000490999 TDGF1P13385 188 aa16.97■□□□□ 0.31
SCAMP3-208ENST00000490999 ARL2P36404 184 aa16.97■□□□□ 0.31
SCAMP3-208ENST00000490999 RPS9P46781 194 aaKnown RBP16.97■□□□□ 0.31
SCAMP3-208ENST00000490999 EARS2Q5JPH6 523 aaKnown RBP16.97■□□□□ 0.31
SCAMP3-208ENST00000490999 PPM1JQ5JR12 505 aa16.97■□□□□ 0.31
SCAMP3-208ENST00000490999 TANGO2Q6ICL3 276 aa16.97■□□□□ 0.31
SCAMP3-208ENST00000490999 PRR23BQ6ZRT6 265 aa16.97■□□□□ 0.31
SCAMP3-208ENST00000490999 CCDC43Q96MW1 224 aaKnown RBP16.97■□□□□ 0.31
SCAMP3-208ENST00000490999 PDZD7Q9H5P4 517 aa16.97■□□□□ 0.31
SCAMP3-208ENST00000490999 ZMYM2Q9UBW7 1377 aa16.97■□□□□ 0.31
SCAMP3-208ENST00000490999 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.96■□□□□ 0.31
SCAMP3-208ENST00000490999 I3L4J1 428 aa16.96■□□□□ 0.31
SCAMP3-208ENST00000490999 TBC1D4O60343 1298 aa16.96■□□□□ 0.31
SCAMP3-208ENST00000490999 ECI2O75521 394 aa16.96■□□□□ 0.31
SCAMP3-208ENST00000490999 SLITRK3O94933 977 aa16.96■□□□□ 0.31
SCAMP3-208ENST00000490999 RHOP08100 348 aa16.96■□□□□ 0.31
SCAMP3-208ENST00000490999 GCFC2P16383 781 aaKnown RBP16.96■□□□□ 0.31
SCAMP3-208ENST00000490999 FCARP24071 287 aa16.96■□□□□ 0.31
SCAMP3-208ENST00000490999 EVCP57679 992 aa16.96■□□□□ 0.31
SCAMP3-208ENST00000490999 ADCY1Q08828 1119 aa16.96■□□□□ 0.31
SCAMP3-208ENST00000490999 NAB2Q15742 525 aa16.96■□□□□ 0.31
SCAMP3-208ENST00000490999 GLRA4Q5JXX5 417 aa16.96■□□□□ 0.31
SCAMP3-208ENST00000490999 PPP4R3AQ6IN85 833 aa16.96■□□□□ 0.31
SCAMP3-208ENST00000490999 EIF2AK1Q9BQI3 630 aaKnown RBP16.96■□□□□ 0.31
SCAMP3-208ENST00000490999 RALYQ9UKM9 306 aaKnown RBP16.96■□□□□ 0.31
SCAMP3-208ENST00000490999 KCNH3Q9ULD8 1083 aa16.96■□□□□ 0.31
SCAMP3-208ENST00000490999 FRYQ5TBA9 3013 aa16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 TBX3O15119 743 aa16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 NCAM2O15394 837 aa16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 DGAT1O75907 488 aa16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 POU2F2P09086 479 aa16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 LIG1P18858 919 aa16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 TKTP29401 623 aaKnown RBP16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 RAB33AQ14088 237 aa16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 TMEM132AQ24JP5 1023 aa16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 GALNT17Q6IS24 598 aa16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 NOSTRINQ8IVI9 506 aa16.95■□□□□ 0.3
SCAMP3-208ENST00000490999 PIGOQ8TEQ8 1089 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms