RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 CATSPER4Q7RTX7 472 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 RFX6Q8HWS3 928 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 BEST2Q8NFU1 509 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 BCAS4Q8TDM0 211 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 ST6GALNAC4Q9H4F1 302 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 ASNSD1Q9NWL6 643 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 PSD3Q9NYI0 1048 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 L1RE1Q9UN81 338 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 ALG6Q9Y672 507 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 DAPK3O43293 454 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 IFNB1P01574 187 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 KRT7P08729 469 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 PSMA2P25787 234 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 GTF2A2P52657 109 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 GCNT1Q02742 428 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 KIF22Q14807 665 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 ATF7IP2Q5U623 682 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 CCDC137Q6PK04 289 aaKnown RBP7.83□□□□□ -1.16
NPHP3-208ENST00000490993 SCARA5Q6ZMJ2 495 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 SIAH1Q8IUQ4 282 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 RBBP8NLQ8NC74 664 aaPredicted RBP7.83□□□□□ -1.16
NPHP3-208ENST00000490993 CFAP57Q96MR6 1250 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 TMEM117Q9H0C3 514 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.83□□□□□ -1.16
NPHP3-208ENST00000490993 LTBP3Q9NS15 1303 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 SPATA31C2B4DYI2 1134 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 GOLGA8SH3BPF8 625 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 GCLCP48506 637 aaPredicted RBP7.83□□□□□ -1.16
NPHP3-208ENST00000490993 SNX1Q13596 522 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 CUL2Q13617 745 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 USP50Q70EL3 339 aaPredicted RBP7.83□□□□□ -1.16
NPHP3-208ENST00000490993 PCGF5Q86SE9 256 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 PALM2Q8IXS6 379 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 MSL3Q8N5Y2 521 aaKnown RBP7.83□□□□□ -1.16
NPHP3-208ENST00000490993 C12orf42Q96LP6 360 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 PLCD4Q9BRC7 762 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 KIFC3Q9BVG8 833 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 ARHGEF37A1IGU5 675 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 A6NJR5 290 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 ZBTB39O15060 712 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 MCF2LO15068 1137 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 OGTO15294 1046 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 TGFB1I1O43294 461 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 BUB1BO60566 1050 aaPredicted RBP7.83□□□□□ -1.16
NPHP3-208ENST00000490993 CYP11B1P15538 503 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 ALDH3A1P30838 453 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 ATP1A2P50993 1020 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 NOP14P78316 857 aaKnown RBP7.83□□□□□ -1.16
NPHP3-208ENST00000490993 ZNF211Q13398 564 aaPredicted RBP7.83□□□□□ -1.16
NPHP3-208ENST00000490993 SETDB1Q15047 1291 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 KCTD16Q68DU8 428 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 RCOR2Q8IZ40 523 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 KCTD6Q8NC69 237 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 LENG9Q96B70 501 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 PACSIN1Q9BY11 444 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 NIF3L1Q9GZT8 377 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 THAP2Q9H0W7 228 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 TMEM134Q9H6X4 195 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.83□□□□□ -1.16
NPHP3-208ENST00000490993 ATP8B3O60423 1300 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 LRRD1A4D1F6 860 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 SGK1O00141 431 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 TOM1L1O75674 476 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 PMS2P54278 862 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 ENPEPQ07075 957 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 SPIRE1Q08AE8 756 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 KIAA1755Q5JYT7 1200 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 SCYL2Q6P3W7 929 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 ZPBP2Q6X784 338 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 GSPT2Q8IYD1 628 aaKnown RBP7.82□□□□□ -1.16
NPHP3-208ENST00000490993 CLEC4DQ8WXI8 215 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 KLRG1Q96E93 195 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 CABS1Q96KC9 395 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 TARS2Q9BW92 718 aaKnown RBP7.82□□□□□ -1.16
NPHP3-208ENST00000490993 TXNDC16Q9P2K2 825 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 SNX24Q9Y343 169 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 REXO2Q9Y3B8 237 aaKnown RBP7.82□□□□□ -1.16
NPHP3-208ENST00000490993 RRN3P2A6NIE6 340 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 RNF225M0QZC1 329 aaPredicted RBP7.82□□□□□ -1.16
NPHP3-208ENST00000490993 EPHB6O15197 1021 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 PRPSAP2O60256 369 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 ITGB3BPQ13352 177 aaPredicted RBP7.82□□□□□ -1.16
NPHP3-208ENST00000490993 PSMD6Q15008 389 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 OR6B2Q6IFH4 312 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 WDR49Q8IV35 697 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 HOMEZQ8IX15 550 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 PPP1R14CQ8TAE6 165 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 ACAP3Q96P50 834 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 INPP4AQ96PE3 977 aaPredicted RBP7.82□□□□□ -1.16
NPHP3-208ENST00000490993 ZSWIM1Q9BR11 485 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 MED10Q9BTT4 135 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 AMACRQ9UHK6 382 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 A0A1B0GUL6 1792 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 LAMB1P07942 1786 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 MYH1P12882 1939 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 COL24A1Q17RW2 1714 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 RPTORQ8N122 1335 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 RASGRF2O14827 1237 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 RAD51CO43502 376 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 SGPL1O95470 568 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms