RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 MAP7D2Q96T17 732 aa11.1□□□□□ -0.63
HDAC3-210ENST00000490808 NFKBIZQ9BYH8 718 aa11.1□□□□□ -0.63
HDAC3-210ENST00000490808 IFIH1Q9BYX4 1025 aaKnown RBP11.1□□□□□ -0.63
HDAC3-210ENST00000490808 INTS2Q9H0H0 1204 aaKnown RBP11.1□□□□□ -0.63
HDAC3-210ENST00000490808 PRMT7Q9NVM4 692 aaPredicted RBP11.1□□□□□ -0.63
HDAC3-210ENST00000490808 APEX2Q9UBZ4 518 aa11.1□□□□□ -0.63
HDAC3-210ENST00000490808 ATP11BQ9Y2G3 1177 aa11.1□□□□□ -0.63
HDAC3-210ENST00000490808 USP20Q9Y2K6 914 aa11.1□□□□□ -0.63
HDAC3-210ENST00000490808 ATP8B3O60423 1300 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 SIP14410 1827 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 UQCRHLA0A096LP55 91 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 CTAGE9A4FU28 777 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 ANKRD63C9JTQ0 380 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 DYNC1I1O14576 645 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 CLDN3O15551 220 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 TACC1O75410 805 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 TOM1L1O75674 476 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 UQCRHP07919 91 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 ZNF286BP0CG31 522 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 SMIM10L2AP0DMW4 78 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 SMIM10L2BP0DMW5 78 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 SYN1P17600 705 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 RFC2P35250 354 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 PRKCIP41743 596 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 MAGEA1P43355 309 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 ATN1P54259 1190 aaPredicted RBP11.09□□□□□ -0.63
HDAC3-210ENST00000490808 POU5F1Q01860 360 aaKnown RBP11.09□□□□□ -0.63
HDAC3-210ENST00000490808 NCBP1Q09161 790 aaKnown RBP11.09□□□□□ -0.63
HDAC3-210ENST00000490808 PPFIA1Q13136 1202 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 CAPSQ13938 189 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 TRIM60Q495X7 471 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 FAM47CQ5HY64 1035 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 CDCA2Q69YH5 1023 aaPredicted RBP11.09□□□□□ -0.63
HDAC3-210ENST00000490808 RHPN2Q8IUC4 686 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 NME8Q8N427 588 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 RNF10Q8N5U6 811 aaKnown RBP11.09□□□□□ -0.63
HDAC3-210ENST00000490808 METTL13Q8N6R0 699 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 ACRBPQ8NEB7 543 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 FBXL13Q8NEE6 735 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 TCHPQ9BT92 498 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.09□□□□□ -0.63
HDAC3-210ENST00000490808 MSTO1Q9BUK6 570 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 KIFC3Q9BVG8 833 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 TMEM39AQ9NV64 488 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 ARHGAP20Q9P2F6 1191 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 DNAJC12Q9UKB3 198 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 TBX21Q9UL17 535 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 PCDHA13Q9Y5I0 950 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 GRIN2DO15399 1336 aa11.09□□□□□ -0.63
HDAC3-210ENST00000490808 MBLAC1A4D2B0 266 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-210ENST00000490808 GOLGA8IPA6NC78 632 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 GOLGA8JA6NMD2 632 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 RBAK-RBAKDNI3L0D1 243 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 EPHB6O15197 1021 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 PQBP1O60828 265 aaKnown RBP11.08□□□□□ -0.64
HDAC3-210ENST00000490808 URI1O94763 535 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-210ENST00000490808 SLU7O95391 586 aaKnown RBP11.08□□□□□ -0.64
HDAC3-210ENST00000490808 PRKCBP05771 671 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 PFKMP08237 780 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 TRIM49P0CI25 452 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 TRIM49CP0CI26 452 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 SRGAP2CP0DJJ0 459 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 INSRRP14616 1297 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 KLRC1P26715 233 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 ADSSP30520 456 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 GTF2F1P35269 517 aaKnown RBP eCLIP11.08□□□□□ -0.64
HDAC3-210ENST00000490808 SOX5P35711 763 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 MAGEA10P43363 369 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-210ENST00000490808 ADAM17P78536 824 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 FAAP100Q0VG06 881 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 BMS1Q14692 1282 aaKnown RBP11.08□□□□□ -0.64
HDAC3-210ENST00000490808 PSMD6Q15008 389 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 PCBP1Q15365 356 aaKnown RBP eCLIP11.08□□□□□ -0.64
HDAC3-210ENST00000490808 SLC18A3Q16572 532 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 PTGISQ16647 500 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 ZNF569Q5MCW4 686 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 SERINC5Q86VE9 423 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 RNF149Q8NC42 400 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 MNS1Q8NEH6 495 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 TRIM58Q8NG06 486 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 SECISBP2LQ93073 1101 aaKnown RBP11.08□□□□□ -0.64
HDAC3-210ENST00000490808 SAAL1Q96ER3 474 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 CALR3Q96L12 384 aaKnown RBP11.08□□□□□ -0.64
HDAC3-210ENST00000490808 NT5C1BQ96P26 610 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 LBHD1Q9BQE6 289 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-210ENST00000490808 FAM213AQ9BRX8 229 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 IMPG2Q9BZV3 1241 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 INO80BQ9C086 356 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-210ENST00000490808 UBE2OQ9C0C9 1292 aaKnown RBP11.08□□□□□ -0.64
HDAC3-210ENST00000490808 HDAC6Q9UBN7 1215 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 GUCA1BQ9UMX6 200 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 COQ4Q9Y3A0 265 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 TELO2Q9Y4R8 837 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 FHOD1Q9Y613 1164 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 CUL9Q8IWT3 2517 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 TANC1Q9C0D5 1861 aa11.08□□□□□ -0.64
HDAC3-210ENST00000490808 LAMA2P24043 3122 aaKnown RBP11.07□□□□□ -0.64
HDAC3-210ENST00000490808 A0A0B4J269 797 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 INO80B-WBP1J3KQ70 363 aa11.07□□□□□ -0.64
HDAC3-210ENST00000490808 TULP1O00294 542 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms