RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 PRPHP41219 470 aa23.05■■□□□ 1.28
SYNE4-205ENST00000490730 OSTNP61366 133 aa23.05■■□□□ 1.28
SYNE4-205ENST00000490730 NAB2Q15742 525 aa23.05■■□□□ 1.28
SYNE4-205ENST00000490730 LILRA6Q6PI73 481 aa23.05■■□□□ 1.28
SYNE4-205ENST00000490730 GET4Q7L5D6 327 aaPredicted RBP23.05■■□□□ 1.28
SYNE4-205ENST00000490730 FLCNQ8NFG4 579 aa23.05■■□□□ 1.28
SYNE4-205ENST00000490730 DRC1Q96MC2 740 aa23.05■■□□□ 1.28
SYNE4-205ENST00000490730 KMT5AQ9NQR1 393 aa23.05■■□□□ 1.28
SYNE4-205ENST00000490730 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.05■■□□□ 1.28
SYNE4-205ENST00000490730 ZDHHC7Q9NXF8 308 aa23.05■■□□□ 1.28
SYNE4-205ENST00000490730 FBXL21Q9UKT6 434 aa23.05■■□□□ 1.28
SYNE4-205ENST00000490730 YARSP54577 528 aaKnown RBP23.04■■□□□ 1.28
SYNE4-205ENST00000490730 ELAVL2Q12926 359 aaKnown RBP23.04■■□□□ 1.28
SYNE4-205ENST00000490730 ZNF568Q3ZCX4 644 aa23.04■■□□□ 1.28
SYNE4-205ENST00000490730 RILPL1Q5EBL4 403 aa23.04■■□□□ 1.28
SYNE4-205ENST00000490730 LIN9Q5TKA1 542 aa23.04■■□□□ 1.28
SYNE4-205ENST00000490730 KCNK18Q7Z418 384 aa23.04■■□□□ 1.28
SYNE4-205ENST00000490730 TMEM105Q8N8V8 129 aa23.04■■□□□ 1.28
SYNE4-205ENST00000490730 LNX1Q8TBB1 728 aaPredicted RBP23.04■■□□□ 1.28
SYNE4-205ENST00000490730 PIK3R5Q8WYR1 880 aa23.04■■□□□ 1.28
SYNE4-205ENST00000490730 ATOH1Q92858 354 aaPredicted RBP23.04■■□□□ 1.28
SYNE4-205ENST00000490730 TMX3Q96JJ7 454 aa23.04■■□□□ 1.28
SYNE4-205ENST00000490730 MYADMQ96S97 322 aa23.04■■□□□ 1.28
SYNE4-205ENST00000490730 CLSTN3Q9BQT9 956 aa23.04■■□□□ 1.28
SYNE4-205ENST00000490730 RHOBTB2Q9BYZ6 727 aa23.04■■□□□ 1.28
SYNE4-205ENST00000490730 PRKD2Q9BZL6 878 aa23.04■■□□□ 1.28
SYNE4-205ENST00000490730 IGSF9Q9P2J2 1179 aa23.04■■□□□ 1.28
SYNE4-205ENST00000490730 TNFSF13BQ9Y275 285 aa23.04■■□□□ 1.28
SYNE4-205ENST00000490730 VWA8A3KMH1 1905 aa23.04■■□□□ 1.28
SYNE4-205ENST00000490730 ZMYND10O75800 440 aa23.03■■□□□ 1.28
SYNE4-205ENST00000490730 B3GAT3O94766 335 aa23.03■■□□□ 1.28
SYNE4-205ENST00000490730 C1RP00736 705 aa23.03■■□□□ 1.28
SYNE4-205ENST00000490730 GJB2P29033 226 aa23.03■■□□□ 1.28
SYNE4-205ENST00000490730 CLCNKBP51801 687 aa23.03■■□□□ 1.28
SYNE4-205ENST00000490730 RAD51AP2Q09MP3 1159 aa23.03■■□□□ 1.28
SYNE4-205ENST00000490730 ASTLQ6HA08 431 aaPredicted RBP23.03■■□□□ 1.28
SYNE4-205ENST00000490730 RINT1Q6NUQ1 792 aa23.03■■□□□ 1.28
SYNE4-205ENST00000490730 DAW1Q8N136 415 aa23.03■■□□□ 1.28
SYNE4-205ENST00000490730 CEP120Q8N960 986 aa23.03■■□□□ 1.28
SYNE4-205ENST00000490730 RSAD2Q8WXG1 361 aa23.03■■□□□ 1.28
SYNE4-205ENST00000490730 PPP1R10Q96QC0 940 aaKnown RBP23.03■■□□□ 1.28
SYNE4-205ENST00000490730 PLIN2Q99541 437 aa23.03■■□□□ 1.28
SYNE4-205ENST00000490730 ACO2Q99798 780 aaKnown RBP23.03■■□□□ 1.28
SYNE4-205ENST00000490730 MMTAG2Q9BU76 263 aaKnown RBP23.03■■□□□ 1.28
SYNE4-205ENST00000490730 CCDC94Q9BW85 323 aaPredicted RBP23.03■■□□□ 1.28
SYNE4-205ENST00000490730 MRPL4Q9BYD3 311 aaKnown RBP23.03■■□□□ 1.28
SYNE4-205ENST00000490730 CDT1Q9H211 546 aa23.03■■□□□ 1.28
SYNE4-205ENST00000490730 UPF2Q9HAU5 1272 aaKnown RBP23.03■■□□□ 1.28
SYNE4-205ENST00000490730 GOLGA2P5Q9HBQ8 144 aa23.03■■□□□ 1.28
SYNE4-205ENST00000490730 DUSP12Q9UNI6 340 aa23.03■■□□□ 1.28
SYNE4-205ENST00000490730 H0Y858 1186 aa23.02■■□□□ 1.28
SYNE4-205ENST00000490730 HARSP12081 509 aaKnown RBP23.02■■□□□ 1.28
SYNE4-205ENST00000490730 PDXDC1Q6P996 788 aa23.02■■□□□ 1.28
SYNE4-205ENST00000490730 TCHPQ9BT92 498 aa23.02■■□□□ 1.28
SYNE4-205ENST00000490730 TARS2Q9BW92 718 aaKnown RBP23.02■■□□□ 1.28
SYNE4-205ENST00000490730 TOPORSQ9NS56 1045 aaPredicted RBP23.02■■□□□ 1.28
SYNE4-205ENST00000490730 FBXW11Q9UKB1 542 aa23.02■■□□□ 1.28
SYNE4-205ENST00000490730 VWA3AA6NCI4 1184 aa23.01■■□□□ 1.27
SYNE4-205ENST00000490730 SFI1A8K8P3 1242 aa23.01■■□□□ 1.27
SYNE4-205ENST00000490730 SLC16A4O15374 487 aa23.01■■□□□ 1.27
SYNE4-205ENST00000490730 ADAM12O43184 909 aa23.01■■□□□ 1.27
SYNE4-205ENST00000490730 GALR2O43603 387 aaPredicted RBP23.01■■□□□ 1.27
SYNE4-205ENST00000490730 NARSO43776 548 aaKnown RBP23.01■■□□□ 1.27
SYNE4-205ENST00000490730 GRM5P41594 1212 aa23.01■■□□□ 1.27
SYNE4-205ENST00000490730 ATP2C1P98194 919 aaPredicted RBP23.01■■□□□ 1.27
SYNE4-205ENST00000490730 PPM1LQ5SGD2 360 aa23.01■■□□□ 1.27
SYNE4-205ENST00000490730 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.01■■□□□ 1.27
SYNE4-205ENST00000490730 C1orf186Q6ZWK4 172 aa23.01■■□□□ 1.27
SYNE4-205ENST00000490730 SIX5Q8N196 739 aa23.01■■□□□ 1.27
SYNE4-205ENST00000490730 CDK5RAP3Q96JB5 506 aa23.01■■□□□ 1.27
SYNE4-205ENST00000490730 IRF2BPLQ9H1B7 796 aa23.01■■□□□ 1.27
SYNE4-205ENST00000490730 TMEM134Q9H6X4 195 aa23.01■■□□□ 1.27
SYNE4-205ENST00000490730 ARHGAP28Q9P2N2 729 aa23.01■■□□□ 1.27
SYNE4-205ENST00000490730 EPS15L1Q9UBC2 864 aa23.01■■□□□ 1.27
SYNE4-205ENST00000490730 POLIQ9UNA4 740 aa23.01■■□□□ 1.27
SYNE4-205ENST00000490730 MYH11P35749 1972 aa23.01■■□□□ 1.27
SYNE4-205ENST00000490730 SMIM28A0A1B0GU29 152 aa23■■□□□ 1.27
SYNE4-205ENST00000490730 I3L4J1 428 aa23■■□□□ 1.27
SYNE4-205ENST00000490730 CD2BP2O95400 341 aaKnown RBP23■■□□□ 1.27
SYNE4-205ENST00000490730 C8AP07357 584 aa23■■□□□ 1.27
SYNE4-205ENST00000490730 CFHP08603 1231 aa23■■□□□ 1.27
SYNE4-205ENST00000490730 IGFBP6P24592 240 aaPredicted RBP23■■□□□ 1.27
SYNE4-205ENST00000490730 NUBP1P53384 320 aa23■■□□□ 1.27
SYNE4-205ENST00000490730 MAPK7Q13164 816 aa23■■□□□ 1.27
SYNE4-205ENST00000490730 DCLRE1AQ6PJP8 1040 aa23■■□□□ 1.27
SYNE4-205ENST00000490730 TAS1R3Q7RTX0 852 aa23■■□□□ 1.27
SYNE4-205ENST00000490730 UROC1Q96N76 676 aa23■■□□□ 1.27
SYNE4-205ENST00000490730 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23■■□□□ 1.27
SYNE4-205ENST00000490730 DAXXQ9UER7 740 aaPredicted RBP23■■□□□ 1.27
SYNE4-205ENST00000490730 RBM19Q9Y4C8 960 aaKnown RBP23■■□□□ 1.27
SYNE4-205ENST00000490730 DOCK8Q8NF50 2099 aa23■■□□□ 1.27
SYNE4-205ENST00000490730 CCL16O15467 120 aa22.99■■□□□ 1.27
SYNE4-205ENST00000490730 RFX1P22670 979 aa22.99■■□□□ 1.27
SYNE4-205ENST00000490730 FSHRP23945 695 aa22.99■■□□□ 1.27
SYNE4-205ENST00000490730 OR1D2P34982 312 aa22.99■■□□□ 1.27
SYNE4-205ENST00000490730 STRN3Q13033 797 aa22.99■■□□□ 1.27
SYNE4-205ENST00000490730 UPP1Q16831 310 aa22.99■■□□□ 1.27
SYNE4-205ENST00000490730 GRASPQ7Z6J2 395 aaPredicted RBP22.99■■□□□ 1.27
SYNE4-205ENST00000490730 ST13P5Q8NFI4 369 aaPredicted RBP22.99■■□□□ 1.27
SYNE4-205ENST00000490730 PNMA5Q96PV4 448 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms