RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 SRGAP1Q7Z6B7 1085 aa15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 MICU3Q86XE3 530 aa15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 TMTC2Q8N394 836 aa15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 GAB3Q8WWW8 586 aa15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 TCEAL4Q96EI5 215 aa15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 TRPV5Q9NQA5 729 aa15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 BARHL2Q9NY43 387 aa15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 KIF26AQ9ULI4 1882 aaPredicted RBP15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 SLC12A7Q9Y666 1083 aa15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 LAMA5O15230 3695 aa15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 HELZ2Q9BYK8 2649 aaKnown RBP15.3■□□□□ 0.04
EXOSC3-207ENST00000490516 DDX11L8A8MPP1 907 aa15.29■□□□□ 0.04
EXOSC3-207ENST00000490516 MSH4O15457 936 aa15.29■□□□□ 0.04
EXOSC3-207ENST00000490516 AKAP5P24588 427 aa15.29■□□□□ 0.04
EXOSC3-207ENST00000490516 SFNP31947 248 aa15.29■□□□□ 0.04
EXOSC3-207ENST00000490516 OR1D2P34982 312 aa15.29■□□□□ 0.04
EXOSC3-207ENST00000490516 SOX9P48436 509 aa15.29■□□□□ 0.04
EXOSC3-207ENST00000490516 JAK3P52333 1124 aa15.29■□□□□ 0.04
EXOSC3-207ENST00000490516 LRRC32Q14392 662 aa15.29■□□□□ 0.04
EXOSC3-207ENST00000490516 HSP90AA2PQ14568 343 aaPredicted RBP15.29■□□□□ 0.04
EXOSC3-207ENST00000490516 CPB2Q96IY4 423 aa15.29■□□□□ 0.04
EXOSC3-207ENST00000490516 NXF3Q9H4D5 531 aaKnown RBP15.29■□□□□ 0.04
EXOSC3-207ENST00000490516 VPS45Q9NRW7 570 aa15.29■□□□□ 0.04
EXOSC3-207ENST00000490516 V9GY48 417 aaPredicted RBP15.29■□□□□ 0.04
EXOSC3-207ENST00000490516 NUP205Q92621 2012 aa15.29■□□□□ 0.04
EXOSC3-207ENST00000490516 ATG2BQ96BY7 2078 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 NCANO14594 1321 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 GAS7O60861 476 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 CCDC192P0DO97 292 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 PSMC3P17980 439 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 HOXA6P31267 233 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 VIPR2P41587 438 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 HDAC1Q13547 482 aaPredicted RBP15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 RAB33AQ14088 237 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 PRSS36Q5K4E3 855 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 PLA2G4FQ68DD2 849 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 PRPF31Q8WWY3 499 aaKnown RBP15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 ZSWIM3Q96MP5 696 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 ASB16Q96NS5 453 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 LRRC2Q9BYS8 371 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 GLT8D2Q9H1C3 349 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 AVENQ9NQS1 362 aaPredicted RBP15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 KLK14Q9P0G3 267 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 GIT1Q9Y2X7 761 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 PCDHGA5Q9Y5G8 931 aa15.28■□□□□ 0.04
EXOSC3-207ENST00000490516 MAST4O15021 2626 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 SLC38A8A6NNN8 435 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 ZNF263O14978 683 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 HYAL3O43820 417 aaPredicted RBP15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 EXTL3O43909 919 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 TSPAN1O60635 241 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 ERLIN2O94905 339 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 KIF4AO95239 1232 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 PTPN2P17706 415 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 CIITAP33076 1130 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 LIFRP42702 1097 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 LAMTOR4Q0VGL1 99 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 FUT2Q10981 343 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 GRIK3Q13003 919 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 DAB2IPQ5VWQ8 1189 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 TXNDC11Q6PKC3 985 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 ANO5Q75V66 913 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 MIER3Q7Z3K6 550 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 PDZD3Q86UT5 571 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 EXOC6Q8TAG9 804 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 TMEM143Q96AN5 459 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 TMEM87BQ96K49 555 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 CORO1BQ9BR76 489 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 MTA3Q9BTC8 594 aa15.27■□□□□ 0.04
EXOSC3-207ENST00000490516 WDR27A2RRH5 827 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 CASTOR2A6NHX0 329 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 hCG_1984214I3L0E3 225 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 ARNTLO00327 626 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 CEACAM1P13688 526 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 MCM5P33992 734 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 CCR2P41597 374 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 NPEPPSP55786 919 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 LRCH2Q5VUJ6 765 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 NOTUMQ6P988 496 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 ZNF713Q8N859 430 aaPredicted RBP15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 ZNF579Q8NAF0 562 aaKnown RBP15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 SLC5A5Q92911 643 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 RIT2Q99578 217 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 TEKT3Q9BXF9 490 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 CSRNP2Q9H175 543 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 BMP2KQ9NSY1 1161 aaPredicted RBP15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 KLK13Q9UKR3 277 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 GPSM3Q9Y4H4 160 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 NEUROG3Q9Y4Z2 214 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 FREM2Q5SZK8 3169 aa15.26■□□□□ 0.03
EXOSC3-207ENST00000490516 EDIL3O43854 480 aa15.25■□□□□ 0.03
EXOSC3-207ENST00000490516 DGKKQ5KSL6 1271 aa15.25■□□□□ 0.03
EXOSC3-207ENST00000490516 CHD1LQ86WJ1 897 aa15.25■□□□□ 0.03
EXOSC3-207ENST00000490516 RNF149Q8NC42 400 aa15.25■□□□□ 0.03
EXOSC3-207ENST00000490516 CSGALNACT1Q8TDX6 532 aa15.25■□□□□ 0.03
EXOSC3-207ENST00000490516 DEPDC1BQ8WUY9 529 aa15.25■□□□□ 0.03
EXOSC3-207ENST00000490516 SMARCD2Q92925 531 aa15.25■□□□□ 0.03
EXOSC3-207ENST00000490516 ZC3H10Q96K80 434 aaKnown RBP15.25■□□□□ 0.03
EXOSC3-207ENST00000490516 JPH2Q9BR39 696 aaPredicted RBP15.25■□□□□ 0.03
EXOSC3-207ENST00000490516 CDY1Q9Y6F8 540 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms