RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 TMEM175Q9BSA9 504 aa11.84□□□□□ -0.51
VPS13D-210ENST00000489961 PLVAPQ9BX97 442 aa11.84□□□□□ -0.51
VPS13D-210ENST00000489961 TTYH1Q9H313 450 aaPredicted RBP11.84□□□□□ -0.51
VPS13D-210ENST00000489961 KCTD10Q9H3F6 313 aa11.84□□□□□ -0.51
VPS13D-210ENST00000489961 SEMA6BQ9H3T3 888 aa11.84□□□□□ -0.51
VPS13D-210ENST00000489961 NRDE2Q9H7Z3 1164 aa11.84□□□□□ -0.51
VPS13D-210ENST00000489961 CERS4Q9HA82 394 aa11.84□□□□□ -0.51
VPS13D-210ENST00000489961 KIAA1586Q9HCI6 787 aa11.84□□□□□ -0.51
VPS13D-210ENST00000489961 SLC38A7Q9NVC3 462 aa11.84□□□□□ -0.51
VPS13D-210ENST00000489961 HSPBP1Q9NZL4 362 aa11.84□□□□□ -0.51
VPS13D-210ENST00000489961 CNTN3Q9P232 1028 aa11.84□□□□□ -0.51
VPS13D-210ENST00000489961 HCSTQ9UBK5 93 aa11.84□□□□□ -0.51
VPS13D-210ENST00000489961 MTUS1Q9ULD2 1270 aa11.84□□□□□ -0.51
VPS13D-210ENST00000489961 RANBP2P49792 3224 aaKnown RBP11.84□□□□□ -0.51
VPS13D-210ENST00000489961 SMIM28A0A1B0GU29 152 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 TTC26A0AVF1 554 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 GOLGA8IPA6NC78 632 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 GOLGA8JA6NMD2 632 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 C5orf67F2Z3F1 127 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 PTGESO14684 152 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 PSMA7O14818 248 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 CLIC2O15247 247 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 XPOTO43592 962 aaKnown RBP11.83□□□□□ -0.52
VPS13D-210ENST00000489961 DDHD2O94830 711 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 IL18RAPO95256 599 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 ALDH2P05091 517 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 LINC00271P0C7V0 271 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 KCNE1P15382 129 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 PPM1AP35813 382 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 PRCPP42785 496 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 CYP2J2P51589 502 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 BCAR1P56945 870 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 TUSC3Q13454 348 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 MORC3Q14149 939 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 ENOX2Q16206 610 aaKnown RBP11.83□□□□□ -0.52
VPS13D-210ENST00000489961 GLRA4Q5JXX5 417 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 KCNT2Q6UVM3 1135 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 ZNF280BQ86YH2 543 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 XXYLT1Q8NBI6 393 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 P2RX5Q93086 422 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 FAM212AQ96EL1 285 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 FAM161BQ96MY7 647 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 TSPAN18Q96SJ8 248 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 C11orf84Q9BUA3 381 aaPredicted RBP11.83□□□□□ -0.52
VPS13D-210ENST00000489961 RBAKQ9NYW8 714 aaPredicted RBP11.83□□□□□ -0.52
VPS13D-210ENST00000489961 TRAF3IP3Q9Y228 551 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.83□□□□□ -0.52
VPS13D-210ENST00000489961 ANK1P16157 1881 aa11.83□□□□□ -0.52
VPS13D-210ENST00000489961 COL4A4P53420 1690 aaPredicted RBP11.82□□□□□ -0.52
VPS13D-210ENST00000489961 ZNF233A6NK53 670 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 LACTBL1A8MY62 500 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 TULP1O00294 542 aaPredicted RBP11.82□□□□□ -0.52
VPS13D-210ENST00000489961 EXOC3O60645 756 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 NR3C1P04150 777 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 ADRB2P07550 413 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 GALTP07902 379 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 RPL13P26373 211 aaKnown RBP11.82□□□□□ -0.52
VPS13D-210ENST00000489961 OR1G1P47890 313 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 SLC11A1P49279 550 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 DSC1Q08554 894 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 GPM6BQ13491 265 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 MYBPC2Q14324 1141 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 CCDC183Q5T5S1 534 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 CRELD2Q6UXH1 353 aaPredicted RBP11.82□□□□□ -0.52
VPS13D-210ENST00000489961 SPRED2Q7Z698 418 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 SLC9A9Q8IVB4 645 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 BRSK2Q8IWQ3 736 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 COLGALT2Q8IYK4 626 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 ADSSL1Q8N142 457 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 DEFB123Q8N688 67 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 SYAP1Q96A49 352 aaPredicted RBP11.82□□□□□ -0.52
VPS13D-210ENST00000489961 KIF12Q96FN5 646 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 DHTKD1Q96HY7 919 aaPredicted RBP11.82□□□□□ -0.52
VPS13D-210ENST00000489961 PPP1R10Q96QC0 940 aaKnown RBP11.82□□□□□ -0.52
VPS13D-210ENST00000489961 TSG101Q99816 390 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 CXCL16Q9H2A7 254 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 ASB7Q9H672 318 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 SPG21Q9NZD8 308 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 DNAJB4Q9UDY4 337 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 PLAGL2Q9UPG8 496 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 FAN1Q9Y2M0 1017 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 DERAQ9Y315 318 aa11.82□□□□□ -0.52
VPS13D-210ENST00000489961 H3BNC9 293 aa11.81□□□□□ -0.52
VPS13D-210ENST00000489961 NRP1O14786 923 aa11.81□□□□□ -0.52
VPS13D-210ENST00000489961 MEFVO15553 781 aaPredicted RBP11.81□□□□□ -0.52
VPS13D-210ENST00000489961 PBX3P40426 434 aa11.81□□□□□ -0.52
VPS13D-210ENST00000489961 KRT17Q04695 432 aa11.81□□□□□ -0.52
VPS13D-210ENST00000489961 GRIN2CQ14957 1233 aa11.81□□□□□ -0.52
VPS13D-210ENST00000489961 SURF1Q15526 300 aa11.81□□□□□ -0.52
VPS13D-210ENST00000489961 SNRNP35Q16560 246 aaKnown RBP11.81□□□□□ -0.52
VPS13D-210ENST00000489961 NFIL3Q16649 462 aa11.81□□□□□ -0.52
VPS13D-210ENST00000489961 EDRF1Q3B7T1 1238 aa11.81□□□□□ -0.52
VPS13D-210ENST00000489961 Q7L0L9 218 aa11.81□□□□□ -0.52
VPS13D-210ENST00000489961 SLC39A11Q8N1S5 342 aa11.81□□□□□ -0.52
VPS13D-210ENST00000489961 KLHL23Q8NBE8 558 aa11.81□□□□□ -0.52
VPS13D-210ENST00000489961 RDH13Q8NBN7 331 aa11.81□□□□□ -0.52
VPS13D-210ENST00000489961 ZSWIM2Q8NEG5 633 aa11.81□□□□□ -0.52
VPS13D-210ENST00000489961 GDPD5Q8WTR4 605 aa11.81□□□□□ -0.52
VPS13D-210ENST00000489961 TMEM174Q8WUU8 243 aa11.81□□□□□ -0.52
VPS13D-210ENST00000489961 TMEM169Q96HH4 297 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms