RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 LRRK2Q5S007 2527 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 A0A087WV48 116 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 A0A0D9SFI3 127 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 CCDC194A0A1B0GVG4 234 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 MAGEB2O15479 319 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 ZNF862O60290 1169 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 POU2F2P09086 479 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 PSMC3P17980 439 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 VIPR2P41587 438 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 RAB27AP51159 221 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 MLLT6P55198 1093 aaPredicted RBP8.2□□□□□ -1.1
COL9A1-209ENST00000489861 NUCB1Q02818 461 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 SEMA3BQ13214 749 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 NMIQ13287 307 aaPredicted RBP8.2□□□□□ -1.1
COL9A1-209ENST00000489861 GRM4Q14833 912 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 PON2Q15165 354 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 SEC23AQ15436 765 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 ELF2Q15723 593 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 UBE2SQ16763 222 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 AXDND1Q5T1B0 1012 aaPredicted RBP8.2□□□□□ -1.1
COL9A1-209ENST00000489861 IFIT1BQ5T764 474 aaKnown RBP8.2□□□□□ -1.1
COL9A1-209ENST00000489861 GPR65Q8IYL9 337 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 OTUD7AQ8TE49 926 aaPredicted RBP8.2□□□□□ -1.1
COL9A1-209ENST00000489861 NLRP7Q8WX94 980 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 RABGGTAQ92696 567 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 ZSWIM3Q96MP5 696 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 ASB16Q96NS5 453 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 MXRA8Q9BRK3 442 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 AGO4Q9HCK5 861 aaKnown RBP8.2□□□□□ -1.1
COL9A1-209ENST00000489861 MIOSQ9NXC5 875 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 KANSL3Q9P2N6 904 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 MAFBQ9Y5Q3 323 aaPredicted RBP8.2□□□□□ -1.1
COL9A1-209ENST00000489861 C2CD3Q4AC94 2353 aa8.2□□□□□ -1.1
COL9A1-209ENST00000489861 KIAA1549LQ6ZVL6 1849 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 HELZP42694 1942 aaKnown RBP8.19□□□□□ -1.1
COL9A1-209ENST00000489861 A0A087WZ62 844 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 ZNF263O14978 683 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 DHX15O43143 795 aaKnown RBP8.19□□□□□ -1.1
COL9A1-209ENST00000489861 RHOBTB1O94844 696 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 TMOD1P28289 359 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 CCR2P41597 374 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 MAPK8P45983 427 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 PRSS36Q5K4E3 855 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 UBXN11Q5T124 520 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 B4GALNT3Q6L9W6 998 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 PCSK4Q6UW60 755 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 RALYLQ86SE5 291 aaKnown RBP8.19□□□□□ -1.1
COL9A1-209ENST00000489861 ZNF710Q8N1W2 664 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 TTC8Q8TAM2 541 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 PGBD4Q96DM1 585 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 FDXACB1Q9BRP7 624 aaPredicted RBP8.19□□□□□ -1.1
COL9A1-209ENST00000489861 LY9Q9HBG7 655 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 CACNG4Q9UBN1 327 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 TSC2P49815 1807 aa8.19□□□□□ -1.1
COL9A1-209ENST00000489861 CABIN1Q9Y6J0 2220 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 MUC22E2RYF6 1773 aaPredicted RBP8.18□□□□□ -1.1
COL9A1-209ENST00000489861 WDR27A2RRH5 827 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 MYBPHLA2RUH7 354 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 UPK3BL1B0FP48 263 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 UPK3BL2E5RIL1 263 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 SPECC1L-ADORA2AF8WAN1 911 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 CTHP32929 405 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 CREMQ03060 361 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 ZNF423Q2M1K9 1284 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 CWC27Q6UX04 472 aaKnown RBP8.18□□□□□ -1.1
COL9A1-209ENST00000489861 PLEKHM2Q8IWE5 1019 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 PNPLA1Q8N8W4 532 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 LNX1Q8TBB1 728 aaPredicted RBP8.18□□□□□ -1.1
COL9A1-209ENST00000489861 ADAMTS14Q8WXS8 1223 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 RSPRY1Q96DX4 576 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 ZFP42Q96MM3 310 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 HHIPQ96QV1 700 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 COLEC11Q9BWP8 271 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 GCOM2Q9BZD3 368 aaPredicted RBP8.18□□□□□ -1.1
COL9A1-209ENST00000489861 SENP2Q9HC62 589 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 AVENQ9NQS1 362 aaPredicted RBP8.18□□□□□ -1.1
COL9A1-209ENST00000489861 DKK4Q9UBT3 224 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 ADAM28Q9UKQ2 775 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 PCDHA6Q9UN73 950 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 INVSQ9Y283 1065 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 FARP1Q9Y4F1 1045 aaPredicted RBP8.18□□□□□ -1.1
COL9A1-209ENST00000489861 PCDHA8Q9Y5H6 950 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 CNTNAP2Q9UHC6 1331 aa8.18□□□□□ -1.1
COL9A1-209ENST00000489861 COL5A1P20908 1838 aaPredicted RBP8.17□□□□□ -1.1
COL9A1-209ENST00000489861 TRIP11Q15643 1979 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 PCDH15Q96QU1 1955 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 ARL5CA6NH57 179 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 MAP3K13O43283 966 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 KRT38O76015 456 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 SFPQP23246 707 aaKnown RBP eCLIP8.17□□□□□ -1.1
COL9A1-209ENST00000489861 ITPKBP27987 946 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 GBP1P32455 592 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 KIF5BP33176 963 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 RDXP35241 583 aaKnown RBP8.17□□□□□ -1.1
COL9A1-209ENST00000489861 SCNN1GP51170 649 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 KPNA1P52294 538 aaPredicted RBP8.17□□□□□ -1.1
COL9A1-209ENST00000489861 KCNC4Q03721 635 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 PSMD5Q16401 504 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 UVSSAQ2YD98 709 aa8.17□□□□□ -1.1
COL9A1-209ENST00000489861 PMS2CLQ68D20 193 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms