RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 ACAD10Q6JQN1 1059 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 DNAAF5Q86Y56 855 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 PSPC1Q8WXF1 523 aaKnown RBP16.06■□□□□ 0.16
COL9A1-208ENST00000489611 RIN2Q8WYP3 895 aaPredicted RBP16.06■□□□□ 0.16
COL9A1-208ENST00000489611 TMEM134Q9H6X4 195 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 PCDHB2Q9Y5E7 798 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 PTPRFP10586 1907 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 A0A0G2JLL6 359 aaPredicted RBP16.06■□□□□ 0.16
COL9A1-208ENST00000489611 ZSCAN5CA6NGD5 496 aaPredicted RBP16.06■□□□□ 0.16
COL9A1-208ENST00000489611 HMGB1P1B2RPK0 211 aaPredicted RBP16.06■□□□□ 0.16
COL9A1-208ENST00000489611 GAS2O43903 313 aaKnown RBP16.06■□□□□ 0.16
COL9A1-208ENST00000489611 CTNNA2P26232 953 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 GJA5P36382 358 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 AP3M2P53677 418 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 SKOR1P84550 965 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 KCNV1Q6PIU1 500 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 TRMT1LQ7Z2T5 733 aaKnown RBP16.06■□□□□ 0.16
COL9A1-208ENST00000489611 PRRT2Q7Z6L0 340 aaPredicted RBP16.06■□□□□ 0.16
COL9A1-208ENST00000489611 PROCA1Q8NCQ7 364 aaPredicted RBP16.06■□□□□ 0.16
COL9A1-208ENST00000489611 ZSWIM2Q8NEG5 633 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 TAS1R2Q8TE23 839 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 HINFPQ9BQA5 517 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 FAM213AQ9BRX8 229 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 KIFC3Q9BVG8 833 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 AMACRQ9UHK6 382 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 MTUS1Q9ULD2 1270 aa16.06■□□□□ 0.16
COL9A1-208ENST00000489611 ADGRA3Q8IWK6 1321 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 DOCK5Q9H7D0 1870 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 K7ERI5 159 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 PODXLO00592 558 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 PEX10O60683 326 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 FAM153BP0C7A2 387 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 DLATP10515 647 aaKnown RBP16.05■□□□□ 0.16
COL9A1-208ENST00000489611 EDNRBP24530 442 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 CTNNA1P35221 906 aaKnown RBP16.05■□□□□ 0.16
COL9A1-208ENST00000489611 ALDH5A1P51649 535 aaPredicted RBP16.05■□□□□ 0.16
COL9A1-208ENST00000489611 DR1Q01658 176 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 PPIL2Q13356 520 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 ZACNQ401N2 412 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 FAM153CQ494X1 144 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 MTERF2Q49AM1 385 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 TRIM72Q6ZMU5 477 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 RUFY4Q6ZNE9 571 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 SLC47A2Q86VL8 602 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 DEPTORQ8TB45 409 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 FAM167AQ96KS9 214 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 AVENQ9NQS1 362 aaPredicted RBP16.05■□□□□ 0.16
COL9A1-208ENST00000489611 PARP2Q9UGN5 583 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 FAM153AQ9UHL3 310 aa16.05■□□□□ 0.16
COL9A1-208ENST00000489611 AGO2Q9UKV8 859 aaKnown RBP16.05■□□□□ 0.16
COL9A1-208ENST00000489611 CXCL11O14625 94 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 ECHS1P30084 290 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 ARL2P36404 184 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 EFNA5P52803 228 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 DCAF12L1Q5VU92 463 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.04■□□□□ 0.16
COL9A1-208ENST00000489611 ZNF564Q8TBZ8 553 aaPredicted RBP16.04■□□□□ 0.16
COL9A1-208ENST00000489611 DDX1Q92499 740 aaKnown RBP16.04■□□□□ 0.16
COL9A1-208ENST00000489611 SLC10A4Q96EP9 437 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 PCDHB18PQ96TA0 734 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 CAPS2Q9BXY5 557 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 KCNH4Q9UQ05 1017 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 PCDHA3Q9Y5H8 950 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 PHF2O75151 1096 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 CELF2O95319 508 aaKnown RBP16.04■□□□□ 0.16
COL9A1-208ENST00000489611 MMEP08473 750 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 TBXAS1P24557 533 aaPredicted RBP16.04■□□□□ 0.16
COL9A1-208ENST00000489611 SLC1A1P43005 524 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 PEX5P50542 639 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 GUCY2FP51841 1108 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 GRM1Q13255 1194 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 BIRC3Q13489 604 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 CLEC16AQ2KHT3 1053 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 ZPBP2Q6X784 338 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 CYFIP1Q7L576 1253 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 TAS1R3Q7RTX0 852 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 ARFGAP2Q8N6H7 521 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 MAIP1Q8WWC4 291 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 KAT5Q92993 513 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 CD101Q93033 1021 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 ZNF653Q96CK0 615 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 ERP44Q9BS26 406 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 NUP85Q9BW27 656 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 PCYOX1Q9UHG3 505 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 TRPC6Q9Y210 931 aa16.04■□□□□ 0.16
COL9A1-208ENST00000489611 PPFIA4O75335 1185 aa16.03■□□□□ 0.16
COL9A1-208ENST00000489611 SLC25A27O95847 323 aa16.03■□□□□ 0.16
COL9A1-208ENST00000489611 ITGA4P13612 1032 aa16.03■□□□□ 0.16
COL9A1-208ENST00000489611 EIF3BP55884 814 aaKnown RBP16.03■□□□□ 0.16
COL9A1-208ENST00000489611 PIK3R5Q8WYR1 880 aa16.03■□□□□ 0.16
COL9A1-208ENST00000489611 ALG3Q92685 438 aa16.03■□□□□ 0.16
COL9A1-208ENST00000489611 VCPIP1Q96JH7 1222 aa16.03■□□□□ 0.16
COL9A1-208ENST00000489611 POP1Q99575 1024 aaKnown RBP16.03■□□□□ 0.16
COL9A1-208ENST00000489611 GBA2Q9HCG7 927 aaPredicted RBP16.03■□□□□ 0.16
COL9A1-208ENST00000489611 LCMT1Q9UIC8 334 aa16.03■□□□□ 0.16
COL9A1-208ENST00000489611 LOC102724159A0A0B4J2E5 919 aa16.02■□□□□ 0.16
COL9A1-208ENST00000489611 SRRM3A6NNA2 597 aaPredicted RBP16.02■□□□□ 0.16
COL9A1-208ENST00000489611 TTI1O43156 1089 aa16.02■□□□□ 0.16
COL9A1-208ENST00000489611 SPOPO43791 374 aa16.02■□□□□ 0.16
COL9A1-208ENST00000489611 TNNI1P19237 187 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms