RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 DDX41Q9UJV9 622 aaKnown RBP6.89□□□□□ -1.31
SF3A3-208ENST00000489537 PCDHA13Q9Y5I0 950 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-208ENST00000489537 MRFAP1Q9Y605 127 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 STYXL1Q9Y6J8 313 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 ADGRA2Q96PE1 1338 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 SYNGAP1Q96PV0 1343 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 SZT2Q5T011 3432 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 RANBP2P49792 3224 aaKnown RBP6.88□□□□□ -1.31
SF3A3-208ENST00000489537 A0A0G2JMZ2 1700 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 ZMYM2Q9UBW7 1377 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 RBM47A0AV96 593 aaKnown RBP6.88□□□□□ -1.31
SF3A3-208ENST00000489537 CTAGE15A4D2H0 777 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 FAM181BA6NEQ2 426 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 PDHXO00330 501 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 CES2O00748 559 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 CLIC2O15247 247 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 SLC16A4O15374 487 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 RRP9O43818 475 aaKnown RBP6.88□□□□□ -1.31
SF3A3-208ENST00000489537 ADCY3O60266 1144 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 PEX10O60683 326 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 PPFIA4O75335 1185 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 ZIC2O95409 532 aaPredicted RBP6.88□□□□□ -1.31
SF3A3-208ENST00000489537 MYCP01106 439 aaPredicted RBP6.88□□□□□ -1.31
SF3A3-208ENST00000489537 CTAGE8P0CG41 777 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 TXNP10599 105 aaKnown RBP6.88□□□□□ -1.31
SF3A3-208ENST00000489537 EN2P19622 333 aaPredicted RBP6.88□□□□□ -1.31
SF3A3-208ENST00000489537 TBXAS1P24557 533 aaPredicted RBP6.88□□□□□ -1.31
SF3A3-208ENST00000489537 HOXD13P35453 343 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 SOX5P35711 763 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 ARL2P36404 184 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 PAFAH1B1P43034 410 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 CYP2J2P51589 502 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 YWHAEP62258 255 aaKnown RBP6.88□□□□□ -1.31
SF3A3-208ENST00000489537 CNTN2Q02246 1040 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 TNFAIP2Q03169 654 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 NCBP1Q09161 790 aaKnown RBP6.88□□□□□ -1.31
SF3A3-208ENST00000489537 TARBP2Q15633 366 aaKnown RBP6.88□□□□□ -1.31
SF3A3-208ENST00000489537 NAB2Q15742 525 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 PPP2R5EQ16537 467 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 SNRNP35Q16560 246 aaKnown RBP6.88□□□□□ -1.31
SF3A3-208ENST00000489537 MTERF2Q49AM1 385 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 ZC2HC1CQ53FD0 456 aaPredicted RBP6.88□□□□□ -1.31
SF3A3-208ENST00000489537 IQSEC1Q6DN90 963 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 GPAT2Q6NUI2 795 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 SRGAP1Q7Z6B7 1085 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 DPP9Q86TI2 863 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 CTAGE6Q86UF2 777 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 ZNF677Q86XU0 584 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 CCDC60Q8IWA6 550 aaPredicted RBP6.88□□□□□ -1.31
SF3A3-208ENST00000489537 CTAGE4Q8IX94 777 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 TTC39CQ8N584 583 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 GLIS3Q8NEA6 775 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 FBXL13Q8NEE6 735 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 PPTC7Q8NI37 304 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 TRIM11Q96F44 468 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 MFSD14AQ96MC6 490 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 SPATA33Q96N06 139 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 NT5C1BQ96P26 610 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 PURBQ96QR8 312 aaKnown RBP6.88□□□□□ -1.31
SF3A3-208ENST00000489537 UIMC1Q96RL1 719 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 TSPAN18Q96SJ8 248 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 DESI2Q9BSY9 194 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 SELENOOQ9BVL4 669 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 MRPL4Q9BYD3 311 aaKnown RBP6.88□□□□□ -1.31
SF3A3-208ENST00000489537 ABHD16BQ9H3Z7 469 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 GUCA1BQ9UMX6 200 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 PTPN22Q9Y2R2 807 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 COQ4Q9Y3A0 265 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 SAR1BQ9Y6B6 198 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 PTCH2Q9Y6C5 1203 aa6.88□□□□□ -1.31
SF3A3-208ENST00000489537 PARP14Q460N5 1801 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 GSTTP1A0A1W2PQM5 241 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 RRN3P2A6NIE6 340 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 ZNF862O60290 1169 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 KPNA6O60684 536 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 TOM1L1O75674 476 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 CNMDO75829 334 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 NOL4O94818 638 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 STBD1O95210 358 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 GZMAP12544 262 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 TAL1P17542 331 aaPredicted RBP6.87□□□□□ -1.31
SF3A3-208ENST00000489537 TCF7P36402 384 aaPredicted RBP6.87□□□□□ -1.31
SF3A3-208ENST00000489537 GPC3P51654 580 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 NAP1L1P55209 391 aaKnown RBP6.87□□□□□ -1.31
SF3A3-208ENST00000489537 CHMP4BP1P59074 171 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 GCNT1Q02742 428 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 GPS2Q13227 327 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 MAPK6Q16659 721 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 UGCGQ16739 394 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 ASTE1Q2TB18 679 aaPredicted RBP6.87□□□□□ -1.31
SF3A3-208ENST00000489537 ZNF792Q3KQV3 632 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 MAP9Q49MG5 647 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 PAPD7Q5XG87 772 aaKnown RBP6.87□□□□□ -1.31
SF3A3-208ENST00000489537 CCDC62Q6P9F0 684 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 FAM43BQ6ZT52 329 aaPredicted RBP6.87□□□□□ -1.31
SF3A3-208ENST00000489537 ARMCX2Q7L311 632 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 PLEKHH3Q7Z736 793 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 CD302Q8IX05 232 aa6.87□□□□□ -1.31
SF3A3-208ENST00000489537 RHOT2Q8IXI1 618 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms