RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CCNE2O96020 404 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 MYCP01106 439 aaPredicted RBP9.15□□□□□ -0.94
VTI1A-207ENST00000489357 H2AFZP0C0S5 128 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 TGFB3P10600 412 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 MYCLP12524 364 aaPredicted RBP9.15□□□□□ -0.94
VTI1A-207ENST00000489357 KCNA2P16389 499 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 CYP2B6P20813 491 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 GARTP22102 1010 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 VAMP7P51809 220 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 MLLT1Q03111 559 aaPredicted RBP9.15□□□□□ -0.94
VTI1A-207ENST00000489357 KCNA1Q09470 495 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 STXBP2Q15833 593 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 CCL14Q16627 93 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 XKR9Q5GH70 373 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 XKR3Q5GH77 459 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 MEI1Q5TIA1 1274 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 CCDC181Q5TID7 509 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 MIS18BP1Q6P0N0 1132 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 ALKBH5Q6P6C2 394 aaKnown RBP9.15□□□□□ -0.94
VTI1A-207ENST00000489357 KCNV1Q6PIU1 500 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 H2AFVQ71UI9 128 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 ENOSF1Q7L5Y1 443 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 RAET1EQ8TD07 263 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 MORC4Q8TE76 937 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 MAML3Q96JK9 1138 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 PBKQ96KB5 322 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 FBXL18Q96ME1 805 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 UIMC1Q96RL1 719 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 MMS19Q96T76 1030 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 MMP19Q99542 508 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 TLR10Q9BXR5 811 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 INTS2Q9H0H0 1204 aaKnown RBP9.15□□□□□ -0.94
VTI1A-207ENST00000489357 MED4Q9NPJ6 270 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 A1CFQ9NQ94 594 aaKnown RBP9.15□□□□□ -0.94
VTI1A-207ENST00000489357 HOMER2Q9NSB8 354 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 SLC9A2Q9UBY0 812 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 TBX20Q9UMR3 447 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 COQ4Q9Y3A0 265 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 DUSP10Q9Y6W6 482 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 IVNS1ABPQ9Y6Y0 642 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 KIAA1217Q5T5P2 1943 aa9.15□□□□□ -0.95
VTI1A-207ENST00000489357 FRMPD3Q5JV73 1810 aa9.15□□□□□ -0.95
VTI1A-207ENST00000489357 NCANO14594 1321 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 WDR81Q562E7 1941 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 ZBTB39O15060 712 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 GAS2O43903 313 aaKnown RBP9.14□□□□□ -0.95
VTI1A-207ENST00000489357 RGS20O76081 388 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 ATG7O95352 703 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 HMGCRP04035 888 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 TMEM253P0C7T8 217 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 ELNP15502 786 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 CYP2J2P51589 502 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 CBX1P83916 185 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 PPP2R5EQ16537 467 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 EPC2Q52LR7 807 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 ZNF571Q7Z3V5 609 aaPredicted RBP9.14□□□□□ -0.95
VTI1A-207ENST00000489357 SLFN11Q7Z7L1 901 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 RHOT2Q8IXI1 618 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 TMEM161BQ8NDZ6 487 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 SPATA4Q8NEY3 305 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 SLC30A5Q8TAD4 765 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 DHX38Q92620 1227 aaKnown RBP9.14□□□□□ -0.95
VTI1A-207ENST00000489357 IFT74Q96LB3 600 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 SYT11Q9BT88 431 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.14□□□□□ -0.95
VTI1A-207ENST00000489357 SELENOOQ9BVL4 669 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 KATNBL1Q9H079 304 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 PAK6Q9NQU5 681 aaPredicted RBP9.14□□□□□ -0.95
VTI1A-207ENST00000489357 PDLIM7Q9NR12 457 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 HSPBP1Q9NZL4 362 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 DNAJC12Q9UKB3 198 aa9.14□□□□□ -0.95
VTI1A-207ENST00000489357 DDX39AO00148 427 aaKnown RBP9.13□□□□□ -0.95
VTI1A-207ENST00000489357 BACH1O14867 736 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 SNAI1O95863 264 aaPredicted RBP9.13□□□□□ -0.95
VTI1A-207ENST00000489357 PIGRP01833 764 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 INHAP05111 366 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 PGK2P07205 417 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 SUPT20HL2P0C7V6 817 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 GZMAP12544 262 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 ACTN1P12814 892 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 EDNRBP24530 442 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 KLRC1P26715 233 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 NPTX2P47972 431 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 NAP1L1P55209 391 aaKnown RBP9.13□□□□□ -0.95
VTI1A-207ENST00000489357 PEX3P56589 373 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 CNTN2Q02246 1040 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 CACNB2Q08289 660 aaPredicted RBP9.13□□□□□ -0.95
VTI1A-207ENST00000489357 NNTQ13423 1086 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 KCTD2Q14681 263 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 DRAP1Q14919 205 aaPredicted RBP9.13□□□□□ -0.95
VTI1A-207ENST00000489357 MTFR1Q15390 333 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 LINC01559Q495D7 138 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 SLFN12LQ6IEE8 588 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 PPP1R2P3Q6NXS1 205 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 EMBQ6PCB8 327 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 ABHD15Q6UXT9 468 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 ANO5Q75V66 913 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 DPP9Q86TI2 863 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 ZNF511Q8NB15 262 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 NOA1Q8NC60 698 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms