RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 FOXD4L3Q6VB84 417 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-232ENST00000489053 ZPBP2Q6X784 338 aa9.98□□□□□ -0.81
HDAC6-232ENST00000489053 HAUS6Q7Z4H7 955 aa9.98□□□□□ -0.81
HDAC6-232ENST00000489053 TMEM161BQ8NDZ6 487 aa9.98□□□□□ -0.81
HDAC6-232ENST00000489053 RABGGTAQ92696 567 aa9.98□□□□□ -0.81
HDAC6-232ENST00000489053 DDX27Q96GQ7 796 aaKnown RBP9.98□□□□□ -0.81
HDAC6-232ENST00000489053 EPSTI1Q96J88 318 aa9.98□□□□□ -0.81
HDAC6-232ENST00000489053 KLHL5Q96PQ7 755 aa9.98□□□□□ -0.81
HDAC6-232ENST00000489053 TTPALQ9BTX7 342 aa9.98□□□□□ -0.81
HDAC6-232ENST00000489053 MSTO1Q9BUK6 570 aa9.98□□□□□ -0.81
HDAC6-232ENST00000489053 CCSER1Q9C0I3 900 aa9.98□□□□□ -0.81
HDAC6-232ENST00000489053 CDT1Q9H211 546 aa9.98□□□□□ -0.81
HDAC6-232ENST00000489053 PIDD1Q9HB75 910 aa9.98□□□□□ -0.81
HDAC6-232ENST00000489053 MARCH5Q9NX47 278 aa9.98□□□□□ -0.81
HDAC6-232ENST00000489053 MIOSQ9NXC5 875 aa9.98□□□□□ -0.81
HDAC6-232ENST00000489053 HCN4Q9Y3Q4 1203 aa9.98□□□□□ -0.81
HDAC6-232ENST00000489053 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-232ENST00000489053 KIAA1671Q9BY89 1806 aa9.98□□□□□ -0.81
HDAC6-232ENST00000489053 TCF20Q9UGU0 1960 aaKnown RBP9.97□□□□□ -0.81
HDAC6-232ENST00000489053 SPTLC2O15270 562 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 TEX28O15482 410 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 XPOTO43592 962 aaKnown RBP9.97□□□□□ -0.81
HDAC6-232ENST00000489053 KIF4AO95239 1232 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 CLTAP09496 248 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 IDEP14735 1019 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 GAP43P17677 238 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 ME1P48163 572 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 DSG1Q02413 1049 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 SLC39A14Q15043 492 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 PSMD5Q16401 504 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 SYCE2Q6PIF2 218 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 DCLRE1AQ6PJP8 1040 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 CCDC149Q6ZUS6 474 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 STXBP4Q6ZWJ1 553 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 DYMQ7RTS9 669 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 PALB2Q86YC2 1186 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 RNF135Q8IUD6 432 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 GLYCTKQ8IVS8 523 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 C12orf76Q8N812 135 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-232ENST00000489053 TDRD5Q8NAT2 981 aaKnown RBP9.97□□□□□ -0.81
HDAC6-232ENST00000489053 STAMQ92783 540 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 ACSF2Q96CM8 615 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-232ENST00000489053 FAM212AQ96EL1 285 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 B3GALT6Q96L58 329 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 CLIC6Q96NY7 704 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 USP28Q96RU2 1077 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 NTPCRQ9BSD7 190 aaKnown RBP9.97□□□□□ -0.81
HDAC6-232ENST00000489053 VN1R3Q9BXE9 311 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 PANK2Q9BZ23 570 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 EPHX3Q9H6B9 360 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 MRPL44Q9H9J2 332 aaKnown RBP9.97□□□□□ -0.81
HDAC6-232ENST00000489053 MAN1C1Q9NR34 630 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 FBXO2Q9UK22 296 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-232ENST00000489053 TBX20Q9UMR3 447 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 EXOC7Q9UPT5 735 aa9.97□□□□□ -0.81
HDAC6-232ENST00000489053 SMIM28A0A1B0GU29 152 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 FAM86C2PA6NEL3 165 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 C19orf67A6NJJ6 358 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 F8W810 466 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 PI4K2BG5E9Z4 385 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 PTGESO14684 152 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 EDN1P05305 212 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 ZSCAN22P10073 491 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-232ENST00000489053 MYBP10242 640 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 CLCN4P51793 760 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 NCKAP1LP55160 1127 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 AMPD3Q01432 767 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 GRIN1Q05586 938 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 BECN1Q14457 450 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 PTPAQ15257 358 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 ARSHQ5FYA8 562 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-232ENST00000489053 OTOP3Q7RTS5 596 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 TAS1R1Q7RTX1 841 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 SYCP3Q8IZU3 236 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 PDILTQ8N807 584 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 CEP120Q8N960 986 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 GSTCDQ8NEC7 633 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 KCNG4Q8TDN1 519 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 NOC3LQ8WTT2 800 aaKnown RBP9.96□□□□□ -0.82
HDAC6-232ENST00000489053 SUSD6Q92537 303 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 KIF12Q96FN5 646 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 SNX27Q96L92 541 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 GPR62Q9BZJ7 368 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 PLEKHA4Q9H4M7 779 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 RPF1Q9H9Y2 349 aaKnown RBP9.96□□□□□ -0.82
HDAC6-232ENST00000489053 CD320Q9NPF0 282 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 FAM13BQ9NYF5 915 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 TFIP11Q9UBB9 837 aaKnown RBP9.96□□□□□ -0.82
HDAC6-232ENST00000489053 MUTYHQ9UIF7 546 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 CFAP45Q9UL16 551 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 C5orf42Q9H799 3197 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 PLXNA4Q9HCM2 1894 aa9.96□□□□□ -0.82
HDAC6-232ENST00000489053 PODXLO00592 558 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 WEE2P0C1S8 567 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 SPATA31D3P0C874 917 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 RPL17P18621 184 aaKnown RBP9.95□□□□□ -0.82
HDAC6-232ENST00000489053 ELF1P32519 619 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 RPL9P32969 192 aaKnown RBP9.95□□□□□ -0.82
HDAC6-232ENST00000489053 MCM4P33991 863 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms