RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 SMARCC2Q8TAQ2 1214 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 CENPIQ92674 756 aaPredicted RBP3.98□□□□□ -1.77
PRPF4-203ENST00000488937 ALG1Q9BT22 464 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 COLEC11Q9BWP8 271 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 DEF6Q9H4E7 631 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 ZMAT4Q9H898 229 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 UBN1Q9NPG3 1134 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 WASH6PQ9NQA3 447 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 ITM2CQ9NQX7 267 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 SPATA6Q9NWH7 488 aaPredicted RBP3.98□□□□□ -1.77
PRPF4-203ENST00000488937 GGA3Q9NZ52 723 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 TMEFF2Q9UIK5 374 aaPredicted RBP3.98□□□□□ -1.77
PRPF4-203ENST00000488937 KCNG1Q9UIX4 513 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 CBLCQ9ULV8 474 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 NOC2LQ9Y3T9 749 aaKnown RBP3.98□□□□□ -1.77
PRPF4-203ENST00000488937 ANKRD18BA2A2Z9 1011 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 RHPN2P1A8MT19 583 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 H7C1D1 291 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 ZNF561-AS1K7EIQ3 104 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 EIF3FO00303 357 aaPredicted RBP3.97□□□□□ -1.77
PRPF4-203ENST00000488937 FOXN3O00409 490 aaPredicted RBP3.97□□□□□ -1.77
PRPF4-203ENST00000488937 TOR1BO14657 336 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 KPNA5O15131 536 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 GSTA4O15217 222 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 KDM1AO60341 852 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 MGEA5O60502 916 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 ZBTB7AO95365 584 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 CYP2C8P10632 490 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 ENPP1P22413 925 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 ELF1P32519 619 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 GALNSP34059 522 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 LTBRP36941 435 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 SRSF2Q01130 221 aaKnown RBP3.97□□□□□ -1.77
PRPF4-203ENST00000488937 ZNF543Q08ER8 600 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 KIF22Q14807 665 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 FSCN1Q16658 493 aaKnown RBP3.97□□□□□ -1.77
PRPF4-203ENST00000488937 KIZQ2M2Z5 673 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 SLC10A5Q5PT55 438 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 PGBD2Q6P3X8 592 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 APOA5Q6Q788 366 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 DSTYKQ6XUX3 929 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 FRMD7Q6ZUT3 714 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 LINC00482Q8N8I6 264 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 C2orf69Q8N8R5 385 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 SIMC1Q8NDZ2 872 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 NUP133Q8WUM0 1156 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 FBXW5Q969U6 566 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 APIPQ96GX9 242 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 PEX11GQ96HA9 241 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 MMP19Q99542 508 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 ELF4Q99607 663 aaPredicted RBP3.97□□□□□ -1.77
PRPF4-203ENST00000488937 PTPN18Q99952 460 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 TREX2Q9BQ50 279 aaPredicted RBP3.97□□□□□ -1.77
PRPF4-203ENST00000488937 BOCQ9BWV1 1114 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 C22orf23Q9BZE7 217 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 LMAN2LQ9H0V9 348 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 ANKEF1Q9NU02 776 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 DNAJC28Q9NX36 388 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 NKIRAS2Q9NYR9 191 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 PLA2G2DQ9UNK4 145 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 HCFC2Q9Y5Z7 792 aa3.97□□□□□ -1.77
PRPF4-203ENST00000488937 TRBV23OR9-2A0A075B6M9 112 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 FAM170AA1A519 330 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 NPEPPSL1A6NEC2 478 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 TISP43B9A030 160 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 B9A039 149 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 MUSKO15146 869 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 MEFVO15553 781 aaPredicted RBP3.96□□□□□ -1.78
PRPF4-203ENST00000488937 DHX16O60231 1041 aaKnown RBP3.96□□□□□ -1.78
PRPF4-203ENST00000488937 DTNBO60941 627 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 MTA2O94776 668 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 ERBB2P04626 1255 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 THP07101 528 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 LCP1P13796 627 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 PAMP19021 973 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 SLC9A1P19634 815 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 EDNRBP24530 442 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 TECP42680 631 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 SEPHS1P49903 392 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 KIF23Q02241 960 aaPredicted RBP3.96□□□□□ -1.78
PRPF4-203ENST00000488937 ANO4Q32M45 955 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 KRTAP15-1Q3LI76 137 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 CCDC92Q53HC0 331 aaPredicted RBP3.96□□□□□ -1.78
PRPF4-203ENST00000488937 SLC45A4Q5BKX6 768 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 KIAA1614Q5VZ46 1190 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 ESRP1Q6NXG1 681 aaKnown RBP3.96□□□□□ -1.78
PRPF4-203ENST00000488937 LIMS2Q7Z4I7 341 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 CIR1Q86X95 450 aaPredicted RBP3.96□□□□□ -1.78
PRPF4-203ENST00000488937 COL23A1Q86Y22 540 aaPredicted RBP3.96□□□□□ -1.78
PRPF4-203ENST00000488937 THEMISQ8N1K5 641 aaPredicted RBP3.96□□□□□ -1.78
PRPF4-203ENST00000488937 CISD2Q8N5K1 135 aaKnown RBP3.96□□□□□ -1.78
PRPF4-203ENST00000488937 NETO2Q8NC67 525 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 TGFBRAP1Q8WUH2 860 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 ASB12Q8WXK4 309 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 GOLGA1Q92805 767 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 LCORQ96JN0 433 aaPredicted RBP3.96□□□□□ -1.78
PRPF4-203ENST00000488937 RMDN3Q96TC7 470 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 CGRRF1Q99675 332 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 CHCHD6Q9BRQ6 235 aa3.96□□□□□ -1.78
PRPF4-203ENST00000488937 AP1M1Q9BXS5 423 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms