RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 SNX27Q96L92 541 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 TLE6Q9H808 572 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 PLEKHA5Q9HAU0 1116 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 SLC38A7Q9NVC3 462 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 THEGQ9P2T0 379 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 FSD2A1L4K1 749 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 ANKRD63C9JTQ0 380 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 FSCN2O14926 492 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 PRPF6O94906 941 aaKnown RBP16.42■□□□□ 0.22
CXCL12-207ENST00000488591 KCNE1P15382 129 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 CASP1P29466 404 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 CA8P35219 290 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 CASP5P51878 434 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 SEZ6Q53EL9 994 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 XKR4Q5GH76 650 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 GLRA4Q5JXX5 417 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 PLPP4Q5VZY2 271 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 KRBA2Q6ZNG9 492 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 TMEM173Q86WV6 379 aaPredicted RBP16.42■□□□□ 0.22
CXCL12-207ENST00000488591 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.42■□□□□ 0.22
CXCL12-207ENST00000488591 POMGNT1Q8WZA1 660 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 UROC1Q96N76 676 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 HAPLN2Q9GZV7 340 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 GOLPH3LQ9H4A5 285 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 IGFLR1Q9H665 355 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 RPF1Q9H9Y2 349 aaKnown RBP16.42■□□□□ 0.22
CXCL12-207ENST00000488591 AGO2Q9UKV8 859 aaKnown RBP16.42■□□□□ 0.22
CXCL12-207ENST00000488591 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.42■□□□□ 0.22
CXCL12-207ENST00000488591 STYXL1Q9Y6J8 313 aa16.42■□□□□ 0.22
CXCL12-207ENST00000488591 CASTOR2A6NHX0 329 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 EIF3DO15371 548 aaKnown RBP eCLIP16.41■□□□□ 0.22
CXCL12-207ENST00000488591 TADA2AO75478 443 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 CXCL14O95715 111 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 PPP2R3AQ06190 1150 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 KCNA1Q09470 495 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 PSMD2Q13200 908 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 HSP90AA2PQ14568 343 aaPredicted RBP16.41■□□□□ 0.22
CXCL12-207ENST00000488591 AAK1Q2M2I8 961 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 SLC10A6Q3KNW5 377 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 SLC39A4Q6P5W5 647 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 EP400NLQ6ZTU2 488 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 CD302Q8IX05 232 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 BCL7CQ8WUZ0 217 aaPredicted RBP16.41■□□□□ 0.22
CXCL12-207ENST00000488591 HPS3Q969F9 1004 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 PPP1R10Q96QC0 940 aaKnown RBP16.41■□□□□ 0.22
CXCL12-207ENST00000488591 FGFBP2Q9BYJ0 223 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 CXCL16Q9H2A7 254 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 EXOC1Q9NV70 894 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 CNTN3Q9P232 1028 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 SSX2IPQ9Y2D8 614 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 CITO14578 2027 aa16.41■□□□□ 0.22
CXCL12-207ENST00000488591 LDHAP00338 332 aaKnown RBP16.4■□□□□ 0.22
CXCL12-207ENST00000488591 CXCL8P10145 99 aa16.4■□□□□ 0.22
CXCL12-207ENST00000488591 CTSAP10619 480 aa16.4■□□□□ 0.22
CXCL12-207ENST00000488591 GARTP22102 1010 aa16.4■□□□□ 0.22
CXCL12-207ENST00000488591 TNFSF9P41273 254 aa16.4■□□□□ 0.22
CXCL12-207ENST00000488591 NRIP1P48552 1158 aa16.4■□□□□ 0.22
CXCL12-207ENST00000488591 HYAL1Q12794 435 aa16.4■□□□□ 0.22
CXCL12-207ENST00000488591 NAB2Q15742 525 aa16.4■□□□□ 0.22
CXCL12-207ENST00000488591 ADGRD2Q7Z7M1 963 aa16.4■□□□□ 0.22
CXCL12-207ENST00000488591 RBM23Q86U06 439 aaKnown RBP16.4■□□□□ 0.22
CXCL12-207ENST00000488591 MRPL43Q8N983 215 aaKnown RBP16.4■□□□□ 0.22
CXCL12-207ENST00000488591 ZNF507Q8TCN5 953 aa16.4■□□□□ 0.22
CXCL12-207ENST00000488591 ATXN2LQ8WWM7 1075 aaKnown RBP16.4■□□□□ 0.22
CXCL12-207ENST00000488591 DDX27Q96GQ7 796 aaKnown RBP16.4■□□□□ 0.22
CXCL12-207ENST00000488591 TSPAN18Q96SJ8 248 aa16.4■□□□□ 0.22
CXCL12-207ENST00000488591 CDCA3Q99618 268 aaPredicted RBP16.4■□□□□ 0.22
CXCL12-207ENST00000488591 ZBP1Q9H171 429 aa16.4■□□□□ 0.22
CXCL12-207ENST00000488591 SLC39A2Q9NP94 309 aa16.4■□□□□ 0.22
CXCL12-207ENST00000488591 PRDM6Q9NQX0 595 aa16.4■□□□□ 0.22
CXCL12-207ENST00000488591 MARCH5Q9NX47 278 aa16.4■□□□□ 0.22
CXCL12-207ENST00000488591 ADAM28Q9UKQ2 775 aa16.4■□□□□ 0.22
CXCL12-207ENST00000488591 UBE4BO95155 1302 aa16.4■□□□□ 0.22
CXCL12-207ENST00000488591 TRIP11Q15643 1979 aa16.39■□□□□ 0.21
CXCL12-207ENST00000488591 TISP43B9A030 160 aa16.39■□□□□ 0.21
CXCL12-207ENST00000488591 KIAA0391O15091 583 aaKnown RBP16.39■□□□□ 0.21
CXCL12-207ENST00000488591 XPOTO43592 962 aaKnown RBP16.39■□□□□ 0.21
CXCL12-207ENST00000488591 SOD2P04179 222 aa16.39■□□□□ 0.21
CXCL12-207ENST00000488591 SRGAP2BP0DMP2 458 aa16.39■□□□□ 0.21
CXCL12-207ENST00000488591 ACOT2P49753 483 aa16.39■□□□□ 0.21
CXCL12-207ENST00000488591 MRPS5P82675 430 aaKnown RBP16.39■□□□□ 0.21
CXCL12-207ENST00000488591 POU5F1Q01860 360 aaKnown RBP16.39■□□□□ 0.21
CXCL12-207ENST00000488591 FAM160A1Q05DH4 1040 aa16.39■□□□□ 0.21
CXCL12-207ENST00000488591 EHHADHQ08426 723 aa16.39■□□□□ 0.21
CXCL12-207ENST00000488591 ELAVL2Q12926 359 aaKnown RBP16.39■□□□□ 0.21
CXCL12-207ENST00000488591 KMT5BQ4FZB7 885 aa16.39■□□□□ 0.21
CXCL12-207ENST00000488591 KIAA1841Q6NSI8 718 aa16.39■□□□□ 0.21
CXCL12-207ENST00000488591 DCLRE1AQ6PJP8 1040 aa16.39■□□□□ 0.21
CXCL12-207ENST00000488591 EPM2AIP1Q7L775 607 aaPredicted RBP16.39■□□□□ 0.21
CXCL12-207ENST00000488591 RABGGTAQ92696 567 aa16.39■□□□□ 0.21
CXCL12-207ENST00000488591 PABPC5Q96DU9 382 aaKnown RBP16.39■□□□□ 0.21
CXCL12-207ENST00000488591 FAM212AQ96EL1 285 aa16.39■□□□□ 0.21
CXCL12-207ENST00000488591 HERC2P3Q9BVR0 1158 aa16.39■□□□□ 0.21
CXCL12-207ENST00000488591 UBE2ZQ9H832 354 aaPredicted RBP16.39■□□□□ 0.21
CXCL12-207ENST00000488591 MRPL17Q9NRX2 175 aaKnown RBP16.39■□□□□ 0.21
CXCL12-207ENST00000488591 CLDND1Q9NY35 253 aa16.39■□□□□ 0.21
CXCL12-207ENST00000488591 HOOK1Q9UJC3 728 aaKnown RBP16.39■□□□□ 0.21
CXCL12-207ENST00000488591 CPSF3Q9UKF6 684 aaKnown RBP16.39■□□□□ 0.21
CXCL12-207ENST00000488591 PCDHGC5Q9Y5F6 944 aa16.39■□□□□ 0.21
CXCL12-207ENST00000488591 COL6A3P12111 3177 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms