RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 TMEM140Q9NV12 185 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 MOCS1Q9NZB8 636 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 GPRC5BQ9NZH0 403 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 PCDHA13Q9Y5I0 950 aa6.36□□□□□ -1.39
VPS8-224ENST00000488255 ATRNL1Q5VV63 1379 aa6.35□□□□□ -1.39
VPS8-224ENST00000488255 SHTN1A0MZ66 631 aa6.35□□□□□ -1.39
VPS8-224ENST00000488255 FAM171A2A8MVW0 826 aa6.35□□□□□ -1.39
VPS8-224ENST00000488255 TRIM24O15164 1050 aa6.35□□□□□ -1.39
VPS8-224ENST00000488255 ZNF185O15231 689 aa6.35□□□□□ -1.39
VPS8-224ENST00000488255 SNRPA1P09661 255 aaKnown RBP6.35□□□□□ -1.39
VPS8-224ENST00000488255 RBP3P10745 1247 aa6.35□□□□□ -1.39
VPS8-224ENST00000488255 IL2RBP14784 551 aa6.35□□□□□ -1.39
VPS8-224ENST00000488255 ATP5JP18859 108 aa6.35□□□□□ -1.39
VPS8-224ENST00000488255 IBSPP21815 317 aaPredicted RBP6.35□□□□□ -1.39
VPS8-224ENST00000488255 NR4A1P22736 598 aa6.35□□□□□ -1.39
VPS8-224ENST00000488255 KIF23Q02241 960 aaPredicted RBP6.35□□□□□ -1.39
VPS8-224ENST00000488255 RRP12Q5JTH9 1297 aaKnown RBP6.35□□□□□ -1.39
VPS8-224ENST00000488255 GDF7Q7Z4P5 450 aa6.35□□□□□ -1.39
VPS8-224ENST00000488255 FAM177A1Q8N128 213 aaPredicted RBP6.35□□□□□ -1.39
VPS8-224ENST00000488255 SYNE4Q8N205 404 aa6.35□□□□□ -1.39
VPS8-224ENST00000488255 HAS1Q92839 578 aa6.35□□□□□ -1.39
VPS8-224ENST00000488255 GPATCH3Q96I76 525 aa6.35□□□□□ -1.39
VPS8-224ENST00000488255 HOMER2Q9NSB8 354 aa6.35□□□□□ -1.39
VPS8-224ENST00000488255 SAP30BPQ9UHR5 308 aaKnown RBP6.35□□□□□ -1.39
VPS8-224ENST00000488255 USP15Q9Y4E8 981 aaPredicted RBP6.35□□□□□ -1.39
VPS8-224ENST00000488255 TNKSO95271 1327 aa6.34□□□□□ -1.39
VPS8-224ENST00000488255 PNPLA7Q6ZV29 1317 aa6.34□□□□□ -1.39
VPS8-224ENST00000488255 CYR61O00622 381 aa6.34□□□□□ -1.39
VPS8-224ENST00000488255 GPR32O75388 356 aa6.34□□□□□ -1.39
VPS8-224ENST00000488255 NCR1O76036 304 aa6.34□□□□□ -1.39
VPS8-224ENST00000488255 MGAT1P26572 445 aa6.34□□□□□ -1.39
VPS8-224ENST00000488255 PCSK1P29120 753 aa6.34□□□□□ -1.39
VPS8-224ENST00000488255 PTGS2P35354 604 aa6.34□□□□□ -1.39
VPS8-224ENST00000488255 SP140Q13342 867 aa6.34□□□□□ -1.39
VPS8-224ENST00000488255 GJC2Q5T442 439 aaPredicted RBP6.34□□□□□ -1.39
VPS8-224ENST00000488255 ZNF529Q6P280 563 aa6.34□□□□□ -1.39
VPS8-224ENST00000488255 DRICH1Q6PGQ1 229 aaPredicted RBP6.34□□□□□ -1.39
VPS8-224ENST00000488255 MED25Q71SY5 747 aa6.34□□□□□ -1.39
VPS8-224ENST00000488255 UBE3BQ7Z3V4 1068 aa6.34□□□□□ -1.39
VPS8-224ENST00000488255 ZGPATQ8N5A5 531 aaKnown RBP6.34□□□□□ -1.39
VPS8-224ENST00000488255 LARP4BQ92615 738 aaKnown RBP6.34□□□□□ -1.39
VPS8-224ENST00000488255 TEKT5Q96M29 485 aa6.34□□□□□ -1.39
VPS8-224ENST00000488255 DCLRE1CQ96SD1 692 aaKnown RBP6.34□□□□□ -1.39
VPS8-224ENST00000488255 MRIQ9BWK5 157 aa6.34□□□□□ -1.39
VPS8-224ENST00000488255 PCED1AQ9H1Q7 454 aa6.34□□□□□ -1.39
VPS8-224ENST00000488255 MAP3K2Q9Y2U5 619 aa6.34□□□□□ -1.39
VPS8-224ENST00000488255 MYBBP1AQ9BQG0 1328 aaKnown RBP6.33□□□□□ -1.4
VPS8-224ENST00000488255 DRGXA6NNA5 263 aa6.33□□□□□ -1.4
VPS8-224ENST00000488255 PJA2O43164 708 aa6.33□□□□□ -1.4
VPS8-224ENST00000488255 NDUFA10O95299 355 aa6.33□□□□□ -1.4
VPS8-224ENST00000488255 GUCY1A2P33402 732 aa6.33□□□□□ -1.4
VPS8-224ENST00000488255 HMGA2P52926 109 aa6.33□□□□□ -1.4
VPS8-224ENST00000488255 SLC16A1P53985 500 aa6.33□□□□□ -1.4
VPS8-224ENST00000488255 ODF1Q14990 250 aa6.33□□□□□ -1.4
VPS8-224ENST00000488255 TIGD2Q4W5G0 525 aa6.33□□□□□ -1.4
VPS8-224ENST00000488255 PDCD4Q53EL6 469 aaKnown RBP6.33□□□□□ -1.4
VPS8-224ENST00000488255 EFCAB2Q5VUJ9 269 aa6.33□□□□□ -1.4
VPS8-224ENST00000488255 RSPH3Q86UC2 560 aa6.33□□□□□ -1.4
VPS8-224ENST00000488255 SORCS2Q96PQ0 1159 aa6.33□□□□□ -1.4
VPS8-224ENST00000488255 MANSC1Q9H8J5 431 aa6.33□□□□□ -1.4
VPS8-224ENST00000488255 LPXNO60711 386 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 PEX11BO96011 259 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 AMY1AP04745 511 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 ITGB1P05556 798 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 LAG3P18627 525 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 DDCP20711 480 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 SLC6A2P23975 617 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 IL10RAQ13651 578 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 UAP1L1Q3KQV9 507 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 TSHZ3Q63HK5 1081 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 KCNV1Q6PIU1 500 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 MIGA2Q7L4E1 593 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 ZNF627Q7L945 461 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 PROKR1Q8TCW9 393 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 SSH1Q8WYL5 1049 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 TMX3Q96JJ7 454 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 MLST8Q9BVC4 326 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 ASPSCR1Q9BZE9 553 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 AKIP1Q9NQ31 210 aa6.32□□□□□ -1.4
VPS8-224ENST00000488255 TCRBV7S2A1N4TA0A589 114 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 CCDC154A6NI56 674 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 FZD9O00144 591 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 RNASET2O00584 256 aaKnown RBP6.31□□□□□ -1.4
VPS8-224ENST00000488255 KIAA0391O15091 583 aaKnown RBP6.31□□□□□ -1.4
VPS8-224ENST00000488255 ABHD16AO95870 558 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 POMCP01189 267 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 ZSCAN20P17040 1043 aaPredicted RBP6.31□□□□□ -1.4
VPS8-224ENST00000488255 ZFP36P26651 326 aaKnown RBP6.31□□□□□ -1.4
VPS8-224ENST00000488255 FSTL1Q12841 308 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 BRDTQ58F21 947 aaPredicted RBP6.31□□□□□ -1.4
VPS8-224ENST00000488255 MRGPREQ86SM8 312 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 KAT5Q92993 513 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 HDAC10Q969S8 669 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 CYFIP2Q96F07 1278 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 NEU1Q99519 415 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 SLC46A2Q9BY10 475 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 TDP1Q9NUW8 608 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 FBXO34Q9NWN3 711 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 ANKFY1Q9P2R3 1169 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 SLC23A1Q9UHI7 598 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms